RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 RGS21Q2M5E4 152 aa6.98□□□□□ -1.29
CLK3-205ENST00000561673 ZFP69Q49AA0 526 aa6.98□□□□□ -1.29
CLK3-205ENST00000561673 SAPCD1Q5SSQ6 148 aa6.98□□□□□ -1.29
CLK3-205ENST00000561673 SLC25A29Q8N8R3 303 aa6.98□□□□□ -1.29
CLK3-205ENST00000561673 C9orf85Q96MD7 179 aa6.98□□□□□ -1.29
CLK3-205ENST00000561673 CYTL1Q9NRR1 136 aa6.98□□□□□ -1.29
CLK3-205ENST00000561673 IGHV3-73A0A0B4J1V6 119 aa6.97□□□□□ -1.29
CLK3-205ENST00000561673 PGPEP1LA6NFU8 196 aa6.97□□□□□ -1.29
CLK3-205ENST00000561673 FAM74A7A6NL05 159 aa6.97□□□□□ -1.29
CLK3-205ENST00000561673 RS1O15537 224 aa6.97□□□□□ -1.29
CLK3-205ENST00000561673 IFNA7P01567 189 aa6.97□□□□□ -1.29
CLK3-205ENST00000561673 DNAH10OSP0CZ25 163 aa6.97□□□□□ -1.29
CLK3-205ENST00000561673 RNASE3P12724 160 aaKnown RBP6.97□□□□□ -1.29
CLK3-205ENST00000561673 EVI2AP22794 236 aa6.97□□□□□ -1.29
CLK3-205ENST00000561673 AKR1C8PQ5T2L2 129 aa6.97□□□□□ -1.29
CLK3-205ENST00000561673 SH2D6Q7Z4S9 175 aa6.97□□□□□ -1.29
CLK3-205ENST00000561673 NFE4Q86UQ8 179 aa6.97□□□□□ -1.29
CLK3-205ENST00000561673 NHLRC2Q8NBF2 726 aa6.97□□□□□ -1.29
CLK3-205ENST00000561673 PTH2Q96A98 100 aa6.97□□□□□ -1.29
CLK3-205ENST00000561673 ARL2-SNX15V9GYD0 113 aa6.97□□□□□ -1.29
CLK3-205ENST00000561673 FAT1Q14517 4588 aa6.97□□□□□ -1.29
CLK3-205ENST00000561673 IGKV3D-20A0A0C4DH25 116 aa6.96□□□□□ -1.3
CLK3-205ENST00000561673 K7EP13 123 aa6.96□□□□□ -1.3
CLK3-205ENST00000561673 PEX7O00628 323 aa6.96□□□□□ -1.3
CLK3-205ENST00000561673 ARPC5O15511 151 aa6.96□□□□□ -1.3
CLK3-205ENST00000561673 CIDEAO60543 219 aa6.96□□□□□ -1.3
CLK3-205ENST00000561673 CRYGDP07320 174 aa6.96□□□□□ -1.3
CLK3-205ENST00000561673 FUSP35637 526 aaKnown RBP eCLIP6.96□□□□□ -1.3
CLK3-205ENST00000561673 TIRAPP58753 221 aa6.96□□□□□ -1.3
CLK3-205ENST00000561673 ZNF506Q5JVG8 444 aa6.96□□□□□ -1.3
CLK3-205ENST00000561673 MAPKAPK5-AS1Q8N8E1 139 aa6.96□□□□□ -1.3
CLK3-205ENST00000561673 NKX6-2Q9C056 277 aaPredicted RBP6.96□□□□□ -1.3
CLK3-205ENST00000561673 MSRB1Q9NZV6 116 aa6.96□□□□□ -1.3
CLK3-205ENST00000561673 TRBV6-4A0A1B0GX49 114 aa6.95□□□□□ -1.3
CLK3-205ENST00000561673 FABP5P3A8MUU1 101 aa6.95□□□□□ -1.3
CLK3-205ENST00000561673 SMLR1H3BR10 107 aa6.95□□□□□ -1.3
CLK3-205ENST00000561673 CRIP1P50238 77 aa6.95□□□□□ -1.3
CLK3-205ENST00000561673 PPT1P50897 306 aa6.95□□□□□ -1.3
CLK3-205ENST00000561673 ERVFC1-1P60608 527 aa6.95□□□□□ -1.3
CLK3-205ENST00000561673 HIST1H2BAQ96A08 127 aa6.95□□□□□ -1.3
CLK3-205ENST00000561673 PRADC1Q9BSG0 188 aa6.95□□□□□ -1.3
CLK3-205ENST00000561673 IGHV3-38A0A0C4DH36 116 aa6.94□□□□□ -1.3
CLK3-205ENST00000561673 MAP1LC3B2A6NCE7 125 aa6.94□□□□□ -1.3
CLK3-205ENST00000561673 S100A4P26447 101 aaKnown RBP6.94□□□□□ -1.3
CLK3-205ENST00000561673 FHITP49789 147 aa6.94□□□□□ -1.3
CLK3-205ENST00000561673 RHOHQ15669 191 aa6.94□□□□□ -1.3
CLK3-205ENST00000561673 Q6ZSN1 163 aa6.94□□□□□ -1.3
CLK3-205ENST00000561673 Q86TA4 180 aa6.94□□□□□ -1.3
CLK3-205ENST00000561673 MAP1LC3BQ9GZQ8 125 aa6.94□□□□□ -1.3
CLK3-205ENST00000561673 A0A087WTM6 91 aa6.93□□□□□ -1.3
CLK3-205ENST00000561673 B4DEV8 164 aa6.93□□□□□ -1.3
CLK3-205ENST00000561673 MGST1P10620 155 aaKnown RBP6.93□□□□□ -1.3
CLK3-205ENST00000561673 ASIPP42127 132 aa6.93□□□□□ -1.3
CLK3-205ENST00000561673 LGALSLQ3ZCW2 172 aaPredicted RBP6.93□□□□□ -1.3
CLK3-205ENST00000561673 LINC01556Q5JQF7 62 aa6.93□□□□□ -1.3
CLK3-205ENST00000561673 Q8N1X5 172 aa6.93□□□□□ -1.3
CLK3-205ENST00000561673 C10orf126Q8N4M7 172 aa6.93□□□□□ -1.3
CLK3-205ENST00000561673 ZC2HC1AQ96GY0 325 aa6.93□□□□□ -1.3
CLK3-205ENST00000561673 ZFP30Q9Y2G7 519 aa6.93□□□□□ -1.3
CLK3-205ENST00000561673 DNAH8Q96JB1 4490 aa6.93□□□□□ -1.3
CLK3-205ENST00000561673 TRAV8-6A0A0B4J262 113 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 A8MWV9 139 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 KRBOX1C9JBD0 128 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 SH2D1AO60880 128 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 OR10J3Q5JRS4 329 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 PIK3CD-AS1Q5SR53 167 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 FAM162BQ5T6X4 162 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 CST9LP1Q5W188 147 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 UFSP1Q6NVU6 142 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 ZFP2Q6ZN57 461 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 COX8CQ7Z4L0 72 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 KCNRGQ8N5I3 272 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 OR11H4Q8NGC9 324 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 ATP6V0E2Q8NHE4 81 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 FMC1Q96HJ9 113 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 SSBP4Q9BWG4 385 aaPredicted RBP6.92□□□□□ -1.3
CLK3-205ENST00000561673 SAMD10Q9BYL1 202 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 GTSF1LQ9H1H1 148 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 PARLQ9H300 379 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 JPT2Q9H910 190 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 SCRT2Q9NQ03 307 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 IL36BQ9NZH7 164 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 Q9UF83 564 aa6.92□□□□□ -1.3
CLK3-205ENST00000561673 IBA57-AS1B1ANH7 110 aa6.91□□□□□ -1.3
CLK3-205ENST00000561673 H3BVH4 76 aa6.91□□□□□ -1.3
CLK3-205ENST00000561673 M0R036 132 aa6.91□□□□□ -1.3
CLK3-205ENST00000561673 LTAP01374 205 aa6.91□□□□□ -1.3
CLK3-205ENST00000561673 ARMS2P0C7Q2 107 aa6.91□□□□□ -1.3
CLK3-205ENST00000561673 ZNF345Q14585 488 aa6.91□□□□□ -1.3
CLK3-205ENST00000561673 ZNF674Q2M3X9 581 aa6.91□□□□□ -1.3
CLK3-205ENST00000561673 DNLZQ5SXM8 178 aa6.91□□□□□ -1.3
CLK3-205ENST00000561673 LELP1Q5T871 98 aa6.91□□□□□ -1.3
CLK3-205ENST00000561673 STOML3Q8TAV4 291 aa6.91□□□□□ -1.3
CLK3-205ENST00000561673 TCEAL7Q9BRU2 100 aa6.91□□□□□ -1.3
CLK3-205ENST00000561673 TRBV6-1A0A0K0K1D8 114 aa6.9□□□□□ -1.3
CLK3-205ENST00000561673 GRIFINA4D1Z8 144 aa6.9□□□□□ -1.3
CLK3-205ENST00000561673 GAGE12JA6NER3 117 aa6.9□□□□□ -1.3
CLK3-205ENST00000561673 HMSDA8MTL9 139 aa6.9□□□□□ -1.3
CLK3-205ENST00000561673 PAGE4O60829 102 aa6.9□□□□□ -1.3
CLK3-205ENST00000561673 IGHV3-30P01768 117 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms