RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 ZNF674Q2M3X9 581 aa12.54□□□□□ -0.4
COMMD4-204ENST00000561662 TMEM183AQ8IXX5 376 aa12.54□□□□□ -0.4
COMMD4-204ENST00000561662 LINC01587Q99440 93 aa12.54□□□□□ -0.4
COMMD4-204ENST00000561662 SMIM7Q9BQ49 75 aa12.54□□□□□ -0.4
COMMD4-204ENST00000561662 NOP10Q9NPE3 64 aaKnown RBP12.54□□□□□ -0.4
COMMD4-204ENST00000561662 ZFP30Q9Y2G7 519 aa12.54□□□□□ -0.4
COMMD4-204ENST00000561662 A0A1W2PPQ1 181 aa12.53□□□□□ -0.4
COMMD4-204ENST00000561662 DNAH10OSP0CZ25 163 aa12.53□□□□□ -0.4
COMMD4-204ENST00000561662 TSPOP30536 169 aa12.53□□□□□ -0.4
COMMD4-204ENST00000561662 SAPCD1Q5SSQ6 148 aa12.53□□□□□ -0.4
COMMD4-204ENST00000561662 BAGE2Q86Y30 109 aa12.53□□□□□ -0.4
COMMD4-204ENST00000561662 TNFRSF18Q9Y5U5 241 aa12.53□□□□□ -0.4
COMMD4-204ENST00000561662 PGPEP1LA6NFU8 196 aa12.52□□□□□ -0.41
COMMD4-204ENST00000561662 KLLNB2CW77 178 aa12.52□□□□□ -0.41
COMMD4-204ENST00000561662 GNG4P50150 75 aa12.52□□□□□ -0.41
COMMD4-204ENST00000561662 PRR9Q5T870 116 aa12.52□□□□□ -0.41
COMMD4-204ENST00000561662 SMIM12Q96EX1 92 aa12.52□□□□□ -0.41
COMMD4-204ENST00000561662 C8orf49Q96NF6 230 aa12.52□□□□□ -0.41
COMMD4-204ENST00000561662 UPK3BQ9BT76 320 aa12.52□□□□□ -0.41
COMMD4-204ENST00000561662 SEC11CQ9BY50 192 aa12.52□□□□□ -0.41
COMMD4-204ENST00000561662 MRPS16Q9Y3D3 137 aaKnown RBP12.52□□□□□ -0.41
COMMD4-204ENST00000561662 LY96Q9Y6Y9 160 aa12.52□□□□□ -0.41
COMMD4-204ENST00000561662 KIR3DS1Q14943 382 aa12.51□□□□□ -0.41
COMMD4-204ENST00000561662 OCC1Q8TAD7 63 aa12.51□□□□□ -0.41
COMMD4-204ENST00000561662 CARHSP1Q9Y2V2 147 aaKnown RBP12.51□□□□□ -0.41
COMMD4-204ENST00000561662 K7EN84 100 aa12.5□□□□□ -0.41
COMMD4-204ENST00000561662 EREGO14944 169 aa12.5□□□□□ -0.41
COMMD4-204ENST00000561662 HOXA5P20719 270 aa12.5□□□□□ -0.41
COMMD4-204ENST00000561662 LEPP41159 167 aa12.5□□□□□ -0.41
COMMD4-204ENST00000561662 CRIP1P50238 77 aa12.5□□□□□ -0.41
COMMD4-204ENST00000561662 ERVFC1-1P60608 527 aa12.5□□□□□ -0.41
COMMD4-204ENST00000561662 TMEM241Q24JQ0 296 aa12.5□□□□□ -0.41
COMMD4-204ENST00000561662 LINC01551Q86U37 167 aa12.5□□□□□ -0.41
COMMD4-204ENST00000561662 NHLRC2Q8NBF2 726 aa12.5□□□□□ -0.41
COMMD4-204ENST00000561662 ZC2HC1AQ96GY0 325 aa12.5□□□□□ -0.41
COMMD4-204ENST00000561662 SDF2L1Q9HCN8 221 aa12.5□□□□□ -0.41
COMMD4-204ENST00000561662 TIMM8BQ9Y5J9 83 aaPredicted RBP12.5□□□□□ -0.41
COMMD4-204ENST00000561662 F8W036 122 aa12.49□□□□□ -0.41
COMMD4-204ENST00000561662 CDKN1BP46527 198 aa12.49□□□□□ -0.41
COMMD4-204ENST00000561662 ZNF80P51504 273 aaPredicted RBP12.49□□□□□ -0.41
COMMD4-204ENST00000561662 Q6ZSN1 163 aa12.49□□□□□ -0.41
COMMD4-204ENST00000561662 NDFIP1Q9BT67 221 aa12.49□□□□□ -0.41
COMMD4-204ENST00000561662 NAT8Q9UHE5 227 aa12.49□□□□□ -0.41
COMMD4-204ENST00000561662 KRBOX1C9JBD0 128 aa12.48□□□□□ -0.41
COMMD4-204ENST00000561662 FAM229AH3BQW9 127 aa12.48□□□□□ -0.41
COMMD4-204ENST00000561662 GCGP01275 180 aa12.48□□□□□ -0.41
COMMD4-204ENST00000561662 RPL23P62829 140 aaKnown RBP12.48□□□□□ -0.41
COMMD4-204ENST00000561662 CDPF1Q6NVV7 123 aa12.48□□□□□ -0.41
COMMD4-204ENST00000561662 C16orf74Q96GX8 76 aa12.48□□□□□ -0.41
COMMD4-204ENST00000561662 HMCN2Q8NDA2 5059 aa12.48□□□□□ -0.41
COMMD4-204ENST00000561662 SMUG1Q53HV7 270 aa12.47□□□□□ -0.41
COMMD4-204ENST00000561662 GFI1BQ5VTD9 330 aa12.47□□□□□ -0.41
COMMD4-204ENST00000561662 Q6ZQT7 251 aa12.47□□□□□ -0.41
COMMD4-204ENST00000561662 GAGE12BA1L429 117 aa12.46□□□□□ -0.41
COMMD4-204ENST00000561662 C19orf71A6NCJ1 209 aa12.46□□□□□ -0.41
COMMD4-204ENST00000561662 ZNF324O75467 553 aaPredicted RBP12.46□□□□□ -0.41
COMMD4-204ENST00000561662 GAGE7O76087 117 aa12.46□□□□□ -0.41
COMMD4-204ENST00000561662 GAGE12FP0CL80 117 aa12.46□□□□□ -0.41
COMMD4-204ENST00000561662 GAGE12GP0CL81 117 aa12.46□□□□□ -0.41
COMMD4-204ENST00000561662 GAGE12IP0CL82 117 aa12.46□□□□□ -0.41
COMMD4-204ENST00000561662 BTN1A1Q13410 526 aa12.46□□□□□ -0.41
COMMD4-204ENST00000561662 Q6AWC8 147 aa12.46□□□□□ -0.41
COMMD4-204ENST00000561662 C7orf71A4D174 169 aa12.45□□□□□ -0.42
COMMD4-204ENST00000561662 GPX1P07203 203 aa12.45□□□□□ -0.42
COMMD4-204ENST00000561662 RNASE4P34096 147 aaKnown RBP12.45□□□□□ -0.42
COMMD4-204ENST00000561662 RNASE8Q8TDE3 154 aaKnown RBP12.45□□□□□ -0.42
COMMD4-204ENST00000561662 ISOC2Q96AB3 205 aa12.45□□□□□ -0.42
COMMD4-204ENST00000561662 J3KRW8 73 aa12.44□□□□□ -0.42
COMMD4-204ENST00000561662 PFN1P07737 140 aaKnown RBP12.44□□□□□ -0.42
COMMD4-204ENST00000561662 MGST1P10620 155 aaKnown RBP12.44□□□□□ -0.42
COMMD4-204ENST00000561662 PNRC1Q12796 327 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-204ENST00000561662 C11orf21Q9P2W6 132 aa12.44□□□□□ -0.42
COMMD4-204ENST00000561662 A0A087WTM6 91 aa12.43□□□□□ -0.42
COMMD4-204ENST00000561662 SIVA1O15304 175 aa12.43□□□□□ -0.42
COMMD4-204ENST00000561662 SH2D1AO60880 128 aa12.43□□□□□ -0.42
COMMD4-204ENST00000561662 FAM162BQ5T6X4 162 aa12.43□□□□□ -0.42
COMMD4-204ENST00000561662 FAM231DQ6ZW35 169 aa12.43□□□□□ -0.42
COMMD4-204ENST00000561662 TMEM256Q8N2U0 113 aa12.43□□□□□ -0.42
COMMD4-204ENST00000561662 TMEM263Q8WUH6 116 aaKnown RBP12.43□□□□□ -0.42
COMMD4-204ENST00000561662 BIN3Q9NQY0 253 aa12.43□□□□□ -0.42
COMMD4-204ENST00000561662 TRAV12-3A0A0B4J271 114 aa12.42□□□□□ -0.42
COMMD4-204ENST00000561662 FABP5P3A8MUU1 101 aa12.42□□□□□ -0.42
COMMD4-204ENST00000561662 GCSHP23434 173 aa12.42□□□□□ -0.42
COMMD4-204ENST00000561662 ADIRFQ15847 76 aa12.42□□□□□ -0.42
COMMD4-204ENST00000561662 C20orf144Q9BQM9 153 aa12.42□□□□□ -0.42
COMMD4-204ENST00000561662 A0A096LPF7 62 aa12.41□□□□□ -0.42
COMMD4-204ENST00000561662 TRAV21A0A0B4J279 112 aa12.41□□□□□ -0.42
COMMD4-204ENST00000561662 PRR27Q6MZM9 219 aa12.41□□□□□ -0.42
COMMD4-204ENST00000561662 NUDT10Q8NFP7 164 aa12.41□□□□□ -0.42
COMMD4-204ENST00000561662 NUDT11Q96G61 164 aa12.41□□□□□ -0.42
COMMD4-204ENST00000561662 NXPH4O95158 308 aa12.4□□□□□ -0.42
COMMD4-204ENST00000561662 ZNF493Q6ZR52 646 aa12.4□□□□□ -0.42
COMMD4-204ENST00000561662 LINC00612Q8N6U2 182 aa12.4□□□□□ -0.42
COMMD4-204ENST00000561662 VSIG2Q96IQ7 327 aa12.4□□□□□ -0.42
COMMD4-204ENST00000561662 LINC00467Q9BRT7 94 aa12.4□□□□□ -0.42
COMMD4-204ENST00000561662 RNASE7Q9H1E1 156 aaKnown RBP12.4□□□□□ -0.42
COMMD4-204ENST00000561662 OSTCQ9NRP0 149 aa12.4□□□□□ -0.42
COMMD4-204ENST00000561662 IGKV3D-20A0A0C4DH25 116 aa12.39□□□□□ -0.43
COMMD4-204ENST00000561662 ATP6V1G1O75348 118 aa12.39□□□□□ -0.43
COMMD4-204ENST00000561662 APOC3P02656 99 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms