RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 OR2D3Q8NGH3 330 aa11.55□□□□□ -0.56
USB1-204ENST00000561568 NUDT11Q96G61 164 aa11.55□□□□□ -0.56
USB1-204ENST00000561568 CIDEAO60543 219 aa11.54□□□□□ -0.56
USB1-204ENST00000561568 MED14OSP0DP75 135 aa11.54□□□□□ -0.56
USB1-204ENST00000561568 RPL19P84098 196 aaKnown RBP11.54□□□□□ -0.56
USB1-204ENST00000561568 SLAQ13239 276 aa11.54□□□□□ -0.56
USB1-204ENST00000561568 SYT8Q8NBV8 401 aa11.54□□□□□ -0.56
USB1-204ENST00000561568 PHLDA3Q9Y5J5 127 aa11.54□□□□□ -0.56
USB1-204ENST00000561568 IGHV4-4A0A075B6R2 117 aa11.53□□□□□ -0.56
USB1-204ENST00000561568 H3BVH4 76 aa11.53□□□□□ -0.56
USB1-204ENST00000561568 FAM231DQ6ZW35 169 aa11.53□□□□□ -0.56
USB1-204ENST00000561568 LINC01551Q86U37 167 aa11.53□□□□□ -0.56
USB1-204ENST00000561568 OR4C5Q8NGB2 326 aa11.53□□□□□ -0.56
USB1-204ENST00000561568 SSBP4Q9BWG4 385 aaPredicted RBP11.53□□□□□ -0.56
USB1-204ENST00000561568 SCRT2Q9NQ03 307 aa11.53□□□□□ -0.56
USB1-204ENST00000561568 NAT8Q9UHE5 227 aa11.53□□□□□ -0.56
USB1-204ENST00000561568 TRAV4A0A0B4J268 109 aa11.52□□□□□ -0.57
USB1-204ENST00000561568 RNASE7Q9H1E1 156 aaKnown RBP11.52□□□□□ -0.57
USB1-204ENST00000561568 DNAH7Q8WXX0 4024 aa11.51□□□□□ -0.57
USB1-204ENST00000561568 A8MWV9 139 aa11.51□□□□□ -0.57
USB1-204ENST00000561568 OR5AL1P0C617 328 aa11.51□□□□□ -0.57
USB1-204ENST00000561568 ERVFC1-1P60608 527 aa11.51□□□□□ -0.57
USB1-204ENST00000561568 UQCC3Q6UW78 93 aa11.51□□□□□ -0.57
USB1-204ENST00000561568 APLNQ9ULZ1 77 aa11.51□□□□□ -0.57
USB1-204ENST00000561568 TRGV4A0A0C4DH28 118 aa11.5□□□□□ -0.57
USB1-204ENST00000561568 A0A1W2PPQ1 181 aa11.5□□□□□ -0.57
USB1-204ENST00000561568 F2Z2F3 143 aa11.5□□□□□ -0.57
USB1-204ENST00000561568 H3BNG1 76 aa11.5□□□□□ -0.57
USB1-204ENST00000561568 RS1O15537 224 aa11.5□□□□□ -0.57
USB1-204ENST00000561568 SNAI2O43623 268 aa11.5□□□□□ -0.57
USB1-204ENST00000561568 GATCO43716 136 aaKnown RBP11.5□□□□□ -0.57
USB1-204ENST00000561568 IGHV3-53P01767 116 aa11.5□□□□□ -0.57
USB1-204ENST00000561568 HOXA5P20719 270 aa11.5□□□□□ -0.57
USB1-204ENST00000561568 DMRTA1Q5VZB9 504 aa11.5□□□□□ -0.57
USB1-204ENST00000561568 TMEM88Q6PEY1 159 aa11.5□□□□□ -0.57
USB1-204ENST00000561568 ZFP82Q8N141 532 aa11.5□□□□□ -0.57
USB1-204ENST00000561568 POM121L12Q8N7R1 296 aa11.5□□□□□ -0.57
USB1-204ENST00000561568 C15orf53Q8NAA6 179 aa11.5□□□□□ -0.57
USB1-204ENST00000561568 RPP21Q9H633 154 aaKnown RBP11.5□□□□□ -0.57
USB1-204ENST00000561568 HHLA3Q9XRX5 114 aa11.5□□□□□ -0.57
USB1-204ENST00000561568 RPL23P62829 140 aaKnown RBP11.49□□□□□ -0.57
USB1-204ENST00000561568 FHL2Q14192 279 aa11.49□□□□□ -0.57
USB1-204ENST00000561568 CFAP126Q5VTH2 177 aa11.49□□□□□ -0.57
USB1-204ENST00000561568 FER1L6-AS1Q8NA97 138 aa11.49□□□□□ -0.57
USB1-204ENST00000561568 ZNF479Q96JC4 524 aa11.49□□□□□ -0.57
USB1-204ENST00000561568 OSTCQ9NRP0 149 aa11.49□□□□□ -0.57
USB1-204ENST00000561568 PRO0255Q9UI72 69 aa11.49□□□□□ -0.57
USB1-204ENST00000561568 A8MWL6 223 aa11.48□□□□□ -0.57
USB1-204ENST00000561568 M0R381 172 aa11.48□□□□□ -0.57
USB1-204ENST00000561568 SFTA3P0C7M3 94 aa11.48□□□□□ -0.57
USB1-204ENST00000561568 SPANXN1Q5VSR9 72 aa11.48□□□□□ -0.57
USB1-204ENST00000561568 C15orf54Q8N8G6 183 aa11.48□□□□□ -0.57
USB1-204ENST00000561568 MUC4Q99102 2169 aa11.48□□□□□ -0.57
USB1-204ENST00000561568 TRAV26-1A0A087WT03 109 aa11.47□□□□□ -0.57
USB1-204ENST00000561568 LINC00862A6NCI5 91 aa11.47□□□□□ -0.57
USB1-204ENST00000561568 IGLC6P0CF74 106 aa11.47□□□□□ -0.57
USB1-204ENST00000561568 GZMBP10144 247 aa11.47□□□□□ -0.57
USB1-204ENST00000561568 ADIRFQ15847 76 aa11.47□□□□□ -0.57
USB1-204ENST00000561568 CT83Q5H943 113 aa11.47□□□□□ -0.57
USB1-204ENST00000561568 WDR73Q6P4I2 378 aa11.47□□□□□ -0.57
USB1-204ENST00000561568 ZFP2Q6ZN57 461 aa11.47□□□□□ -0.57
USB1-204ENST00000561568 ISOC2Q96AB3 205 aa11.47□□□□□ -0.57
USB1-204ENST00000561568 SFRP2Q96HF1 295 aa11.47□□□□□ -0.57
USB1-204ENST00000561568 PAX4O43316 350 aa11.46□□□□□ -0.57
USB1-204ENST00000561568 CRYBA4P53673 196 aa11.46□□□□□ -0.57
USB1-204ENST00000561568 CACNG7P62955 275 aa11.46□□□□□ -0.57
USB1-204ENST00000561568 TPPP3Q9BW30 176 aa11.46□□□□□ -0.57
USB1-204ENST00000561568 A0A0J9YY99 117 aa11.45□□□□□ -0.58
USB1-204ENST00000561568 NXPH4O95158 308 aa11.45□□□□□ -0.58
USB1-204ENST00000561568 FOXA3P55318 350 aaPredicted RBP11.45□□□□□ -0.58
USB1-204ENST00000561568 LYZL1Q6UWQ5 148 aa11.45□□□□□ -0.58
USB1-204ENST00000561568 OR10G8Q8NGN5 311 aa11.45□□□□□ -0.58
USB1-204ENST00000561568 OR10AG1Q8NH19 301 aa11.45□□□□□ -0.58
USB1-204ENST00000561568 FAM231BA6NCW3 169 aa11.44□□□□□ -0.58
USB1-204ENST00000561568 RHODO00212 210 aa11.44□□□□□ -0.58
USB1-204ENST00000561568 NUDT3O95989 172 aa11.44□□□□□ -0.58
USB1-204ENST00000561568 PNRC1Q12796 327 aaPredicted RBP11.44□□□□□ -0.58
USB1-204ENST00000561568 LGALS9CQ6DKI2 356 aa11.44□□□□□ -0.58
USB1-204ENST00000561568 COMMD7Q86VX2 200 aa11.44□□□□□ -0.58
USB1-204ENST00000561568 VSIG2Q96IQ7 327 aa11.44□□□□□ -0.58
USB1-204ENST00000561568 CSMD3Q7Z407 3707 aa11.44□□□□□ -0.58
USB1-204ENST00000561568 TRBV6-4A0A1B0GX49 114 aa11.43□□□□□ -0.58
USB1-204ENST00000561568 TMEM218A2RU14 115 aa11.43□□□□□ -0.58
USB1-204ENST00000561568 P0DMU3 169 aa11.43□□□□□ -0.58
USB1-204ENST00000561568 FAM231AP0DMU4 169 aa11.43□□□□□ -0.58
USB1-204ENST00000561568 FAM231CP0DMU5 169 aa11.43□□□□□ -0.58
USB1-204ENST00000561568 GATA1P15976 413 aaPredicted RBP11.43□□□□□ -0.58
USB1-204ENST00000561568 SSTP61278 116 aa11.43□□□□□ -0.58
USB1-204ENST00000561568 TSKUQ8WUA8 353 aa11.43□□□□□ -0.58
USB1-204ENST00000561568 GFRA4Q9GZZ7 299 aa11.43□□□□□ -0.58
USB1-204ENST00000561568 JPT2Q9H910 190 aa11.43□□□□□ -0.58
USB1-204ENST00000561568 IGHV3-73A0A0B4J1V6 119 aa11.42□□□□□ -0.58
USB1-204ENST00000561568 MUC21A0A0G2JKD1 596 aa11.42□□□□□ -0.58
USB1-204ENST00000561568 MUC21A0A140T8X8 626 aa11.42□□□□□ -0.58
USB1-204ENST00000561568 CRYGDP07320 174 aa11.42□□□□□ -0.58
USB1-204ENST00000561568 NTF3P20783 257 aa11.42□□□□□ -0.58
USB1-204ENST00000561568 MRPL23Q16540 153 aaKnown RBP11.42□□□□□ -0.58
USB1-204ENST00000561568 UFSP1Q6NVU6 142 aa11.42□□□□□ -0.58
USB1-204ENST00000561568 GTSF1Q8WW33 167 aa11.42□□□□□ -0.58
USB1-204ENST00000561568 SAMD10Q9BYL1 202 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 999.3 ms