RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 INSP01308 110 aa12.58□□□□□ -0.4
HDDC3-206ENST00000561036 FABP4P15090 132 aa12.58□□□□□ -0.4
HDDC3-206ENST00000561036 RAB4AP20338 218 aa12.58□□□□□ -0.4
HDDC3-206ENST00000561036 FXYD7P58549 80 aa12.58□□□□□ -0.4
HDDC3-206ENST00000561036 KRTAP24-1Q3LI83 254 aa12.58□□□□□ -0.4
HDDC3-206ENST00000561036 RNF185Q96GF1 192 aa12.58□□□□□ -0.4
HDDC3-206ENST00000561036 C9orf85Q96MD7 179 aa12.58□□□□□ -0.4
HDDC3-206ENST00000561036 ZNF747Q9BV97 191 aa12.58□□□□□ -0.4
HDDC3-206ENST00000561036 LAMTOR2Q9Y2Q5 125 aa12.58□□□□□ -0.4
HDDC3-206ENST00000561036 TIMM8BQ9Y5J9 83 aaPredicted RBP12.58□□□□□ -0.4
HDDC3-206ENST00000561036 SETD2Q9BYW2 2564 aaPredicted RBP12.58□□□□□ -0.4
HDDC3-206ENST00000561036 NUPR1O60356 82 aa12.57□□□□□ -0.4
HDDC3-206ENST00000561036 Q8N1Y9 231 aa12.57□□□□□ -0.4
HDDC3-206ENST00000561036 WFDC9Q8NEX5 89 aa12.57□□□□□ -0.4
HDDC3-206ENST00000561036 WNK1Q9H4A3 2382 aa12.57□□□□□ -0.4
HDDC3-206ENST00000561036 D6R8Y8 96 aa12.56□□□□□ -0.4
HDDC3-206ENST00000561036 SMIM6P0DI80 62 aa12.56□□□□□ -0.4
HDDC3-206ENST00000561036 RBMY1A1P0DJD3 496 aaKnown RBP12.56□□□□□ -0.4
HDDC3-206ENST00000561036 RBMY1CP0DJD4 496 aa12.56□□□□□ -0.4
HDDC3-206ENST00000561036 CKS2P33552 79 aa12.56□□□□□ -0.4
HDDC3-206ENST00000561036 RBMY1FQ15415 496 aaKnown RBP12.56□□□□□ -0.4
HDDC3-206ENST00000561036 IQCJQ1A5X6 159 aa12.56□□□□□ -0.4
HDDC3-206ENST00000561036 PRR31Q5SQ13 230 aa12.56□□□□□ -0.4
HDDC3-206ENST00000561036 OR10D4PQ8NGN7 298 aa12.56□□□□□ -0.4
HDDC3-206ENST00000561036 CHCHD1Q96BP2 118 aaKnown RBP12.56□□□□□ -0.4
HDDC3-206ENST00000561036 PRELID3AQ96N28 172 aa12.56□□□□□ -0.4
HDDC3-206ENST00000561036 RCHY1Q96PM5 261 aa12.56□□□□□ -0.4
HDDC3-206ENST00000561036 AGRNO00468 2067 aa12.56□□□□□ -0.4
HDDC3-206ENST00000561036 SORL1Q92673 2214 aa12.56□□□□□ -0.4
HDDC3-206ENST00000561036 M0R381 172 aa12.55□□□□□ -0.4
HDDC3-206ENST00000561036 EVI2AP22794 236 aa12.55□□□□□ -0.4
HDDC3-206ENST00000561036 SYT8Q8NBV8 401 aa12.55□□□□□ -0.4
HDDC3-206ENST00000561036 AP1S3Q96PC3 154 aa12.55□□□□□ -0.4
HDDC3-206ENST00000561036 CBY3A6NI87 242 aa12.54□□□□□ -0.4
HDDC3-206ENST00000561036 MORN3Q6PF18 240 aaPredicted RBP12.54□□□□□ -0.4
HDDC3-206ENST00000561036 NIT1Q86X76 327 aa12.54□□□□□ -0.4
HDDC3-206ENST00000561036 LINC00518Q8N0U6 118 aa12.54□□□□□ -0.4
HDDC3-206ENST00000561036 MRAP2Q96G30 205 aa12.54□□□□□ -0.4
HDDC3-206ENST00000561036 DPH3P1Q9H4G8 78 aa12.54□□□□□ -0.4
HDDC3-206ENST00000561036 LINC01587Q99440 93 aa12.53□□□□□ -0.4
HDDC3-206ENST00000561036 SAMD10Q9BYL1 202 aa12.53□□□□□ -0.4
HDDC3-206ENST00000561036 MDFICQ9P1T7 246 aa12.53□□□□□ -0.4
HDDC3-206ENST00000561036 WIPF1O43516 503 aa12.52□□□□□ -0.41
HDDC3-206ENST00000561036 HSBP1O75506 76 aa12.52□□□□□ -0.41
HDDC3-206ENST00000561036 LINC00614P0C842 121 aa12.52□□□□□ -0.41
HDDC3-206ENST00000561036 PMCHP20382 165 aa12.52□□□□□ -0.41
HDDC3-206ENST00000561036 PIK3CD-AS1Q5SR53 167 aa12.52□□□□□ -0.41
HDDC3-206ENST00000561036 RNASEKQ6P5S7 137 aaKnown RBP12.52□□□□□ -0.41
HDDC3-206ENST00000561036 GTSCR1Q86UQ5 136 aa12.52□□□□□ -0.41
HDDC3-206ENST00000561036 TMEM158Q8WZ71 300 aa12.52□□□□□ -0.41
HDDC3-206ENST00000561036 PTH2Q96A98 100 aa12.52□□□□□ -0.41
HDDC3-206ENST00000561036 C1QTNF4Q9BXJ3 329 aa12.52□□□□□ -0.41
HDDC3-206ENST00000561036 ZNF415Q09FC8 603 aa12.51□□□□□ -0.41
HDDC3-206ENST00000561036 SHISA2Q6UWI4 295 aa12.51□□□□□ -0.41
HDDC3-206ENST00000561036 POM121L12Q8N7R1 296 aa12.51□□□□□ -0.41
HDDC3-206ENST00000561036 URB1-AS1Q96HZ7 61 aa12.51□□□□□ -0.41
HDDC3-206ENST00000561036 GSN-AS1Q9NRJ2 163 aa12.51□□□□□ -0.41
HDDC3-206ENST00000561036 XCL2Q9UBD3 114 aa12.51□□□□□ -0.41
HDDC3-206ENST00000561036 SMIM17P0DL12 118 aa12.5□□□□□ -0.41
HDDC3-206ENST00000561036 AMTP48728 403 aa12.5□□□□□ -0.41
HDDC3-206ENST00000561036 PRIMA1Q86XR5 153 aa12.5□□□□□ -0.41
HDDC3-206ENST00000561036 DEFB125Q8N687 156 aa12.5□□□□□ -0.41
HDDC3-206ENST00000561036 C3orf56Q8N813 242 aa12.5□□□□□ -0.41
HDDC3-206ENST00000561036 PRSS3P2Q8NHM4 247 aa12.5□□□□□ -0.41
HDDC3-206ENST00000561036 SMKR1H3BMG3 65 aa12.49□□□□□ -0.41
HDDC3-206ENST00000561036 SPRY2O43597 315 aa12.49□□□□□ -0.41
HDDC3-206ENST00000561036 FA2HQ7L5A8 372 aa12.49□□□□□ -0.41
HDDC3-206ENST00000561036 C14orf178Q8N769 122 aaPredicted RBP12.49□□□□□ -0.41
HDDC3-206ENST00000561036 SPATA3Q8NHX4 192 aa12.49□□□□□ -0.41
HDDC3-206ENST00000561036 SPXQ9BT56 116 aa12.49□□□□□ -0.41
HDDC3-206ENST00000561036 MAP1LC3AQ9H492 121 aa12.49□□□□□ -0.41
HDDC3-206ENST00000561036 KIF25-AS1Q9Y6Z4 181 aa12.49□□□□□ -0.41
HDDC3-206ENST00000561036 PRSS47A8MTI9 375 aa12.48□□□□□ -0.41
HDDC3-206ENST00000561036 TNFRSF6BO95407 300 aa12.48□□□□□ -0.41
HDDC3-206ENST00000561036 NCR2O95944 276 aa12.48□□□□□ -0.41
HDDC3-206ENST00000561036 PPP1R17O96001 155 aa12.48□□□□□ -0.41
HDDC3-206ENST00000561036 NPYP01303 97 aa12.48□□□□□ -0.41
HDDC3-206ENST00000561036 C1orf158Q8N1D5 194 aa12.48□□□□□ -0.41
HDDC3-206ENST00000561036 C12orf57Q99622 126 aa12.48□□□□□ -0.41
HDDC3-206ENST00000561036 TMEM208Q9BTX3 173 aa12.48□□□□□ -0.41
HDDC3-206ENST00000561036 WFDC10AQ9H1F0 79 aa12.48□□□□□ -0.41
HDDC3-206ENST00000561036 GOLT1BQ9Y3E0 138 aa12.48□□□□□ -0.41
HDDC3-206ENST00000561036 M0R2P5 195 aa12.47□□□□□ -0.41
HDDC3-206ENST00000561036 GIG44P09565 113 aaPredicted RBP12.47□□□□□ -0.41
HDDC3-206ENST00000561036 JOSD1Q15040 202 aaPredicted RBP12.47□□□□□ -0.41
HDDC3-206ENST00000561036 C12orf54Q6X4T0 127 aa12.47□□□□□ -0.41
HDDC3-206ENST00000561036 NRACQ8N912 160 aa12.47□□□□□ -0.41
HDDC3-206ENST00000561036 NDUFAF3Q9BU61 184 aa12.47□□□□□ -0.41
HDDC3-206ENST00000561036 NXT2Q9NPJ8 142 aaKnown RBP12.47□□□□□ -0.41
HDDC3-206ENST00000561036 AP5S1Q9NUS5 200 aa12.47□□□□□ -0.41
HDDC3-206ENST00000561036 LINC01546A6NGU7 62 aa12.46□□□□□ -0.41
HDDC3-206ENST00000561036 HTN1P15515 57 aa12.46□□□□□ -0.41
HDDC3-206ENST00000561036 RPL35AP18077 110 aaKnown RBP12.46□□□□□ -0.41
HDDC3-206ENST00000561036 LINC00315P59091 139 aa12.46□□□□□ -0.41
HDDC3-206ENST00000561036 ZNF876PQ49A33 203 aa12.46□□□□□ -0.41
HDDC3-206ENST00000561036 PYY3Q5JQD4 70 aa12.46□□□□□ -0.41
HDDC3-206ENST00000561036 C11orf72Q8NBR9 251 aa12.46□□□□□ -0.41
HDDC3-206ENST00000561036 MUC4Q99102 2169 aa12.46□□□□□ -0.42
HDDC3-206ENST00000561036 MGPP08493 103 aa12.45□□□□□ -0.42
HDDC3-206ENST00000561036 IFI27P40305 119 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms