RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 MGST1P10620 155 aaKnown RBP10.89□□□□□ -0.67
SNX1-213ENST00000561026 OR10J3Q5JRS4 329 aa10.89□□□□□ -0.67
SNX1-213ENST00000561026 INO80EQ8NBZ0 244 aaPredicted RBP10.89□□□□□ -0.67
SNX1-213ENST00000561026 LINC00479Q96M42 142 aa10.89□□□□□ -0.67
SNX1-213ENST00000561026 LRCOL1A6NCL2 159 aa10.88□□□□□ -0.67
SNX1-213ENST00000561026 PSCAO43653 123 aa10.88□□□□□ -0.67
SNX1-213ENST00000561026 GCSHP23434 173 aa10.88□□□□□ -0.67
SNX1-213ENST00000561026 LELP1Q5T871 98 aa10.88□□□□□ -0.67
SNX1-213ENST00000561026 RPL7L1Q6DKI1 246 aaKnown RBP10.88□□□□□ -0.67
SNX1-213ENST00000561026 BORCS7-ASMTA0A0B4J1R7 106 aa10.87□□□□□ -0.67
SNX1-213ENST00000561026 TRAV34A0A0B4J273 112 aa10.87□□□□□ -0.67
SNX1-213ENST00000561026 IGKV3D-20A0A0C4DH25 116 aa10.87□□□□□ -0.67
SNX1-213ENST00000561026 RNF222A6NCQ9 220 aa10.87□□□□□ -0.67
SNX1-213ENST00000561026 ZNF726P1Q15940 193 aa10.87□□□□□ -0.67
SNX1-213ENST00000561026 ATP6V0E2Q8NHE4 81 aa10.87□□□□□ -0.67
SNX1-213ENST00000561026 GTSF1LQ9H1H1 148 aa10.87□□□□□ -0.67
SNX1-213ENST00000561026 FAT1Q14517 4588 aa10.86□□□□□ -0.67
SNX1-213ENST00000561026 FABP5P3A8MUU1 101 aa10.86□□□□□ -0.67
SNX1-213ENST00000561026 PIK3CD-AS1Q5SR53 167 aa10.86□□□□□ -0.67
SNX1-213ENST00000561026 Q6ZSN1 163 aa10.86□□□□□ -0.67
SNX1-213ENST00000561026 ARL2-SNX15V9GYD0 113 aa10.86□□□□□ -0.67
SNX1-213ENST00000561026 FXYD6-FXYD2A0A087WZ82 144 aa10.85□□□□□ -0.67
SNX1-213ENST00000561026 CTXND1A0A1B0GTU2 59 aa10.85□□□□□ -0.67
SNX1-213ENST00000561026 IFNA7P01567 189 aa10.85□□□□□ -0.67
SNX1-213ENST00000561026 IGHV3-30P01768 117 aa10.85□□□□□ -0.67
SNX1-213ENST00000561026 IGHV3-33P01772 117 aa10.85□□□□□ -0.67
SNX1-213ENST00000561026 IGHV3-30-3P0DP02 117 aa10.85□□□□□ -0.67
SNX1-213ENST00000561026 IGHV3-30-5P0DP03 117 aa10.85□□□□□ -0.67
SNX1-213ENST00000561026 S100A4P26447 101 aaKnown RBP10.85□□□□□ -0.67
SNX1-213ENST00000561026 ZFP2Q6ZN57 461 aa10.85□□□□□ -0.67
SNX1-213ENST00000561026 PARLQ9H300 379 aa10.85□□□□□ -0.67
SNX1-213ENST00000561026 Q9HAA7 133 aa10.85□□□□□ -0.67
SNX1-213ENST00000561026 IGLV5-52A0A0A0MRZ9 124 aa10.84□□□□□ -0.67
SNX1-213ENST00000561026 A8MWV9 139 aa10.84□□□□□ -0.67
SNX1-213ENST00000561026 ASIPP42127 132 aa10.84□□□□□ -0.67
SNX1-213ENST00000561026 UBE2G2P60604 165 aa10.84□□□□□ -0.67
SNX1-213ENST00000561026 NKX6-2Q9C056 277 aaPredicted RBP10.84□□□□□ -0.67
SNX1-213ENST00000561026 PEX7O00628 323 aa10.83□□□□□ -0.68
SNX1-213ENST00000561026 LGALSLQ3ZCW2 172 aaPredicted RBP10.83□□□□□ -0.68
SNX1-213ENST00000561026 Q5VSD8 79 aa10.83□□□□□ -0.68
SNX1-213ENST00000561026 OR2T35Q8NGX2 323 aa10.83□□□□□ -0.68
SNX1-213ENST00000561026 NTN5Q8WTR8 489 aaPredicted RBP10.83□□□□□ -0.68
SNX1-213ENST00000561026 FRZBQ92765 325 aa10.83□□□□□ -0.68
SNX1-213ENST00000561026 IL36BQ9NZH7 164 aa10.83□□□□□ -0.68
SNX1-213ENST00000561026 FAM74A7A6NL05 159 aa10.82□□□□□ -0.68
SNX1-213ENST00000561026 INAFM2P0DMQ5 153 aa10.82□□□□□ -0.68
SNX1-213ENST00000561026 LAGE3Q14657 143 aa10.82□□□□□ -0.68
SNX1-213ENST00000561026 AKR1C8PQ5T2L2 129 aa10.82□□□□□ -0.68
SNX1-213ENST00000561026 UFSP1Q6NVU6 142 aa10.82□□□□□ -0.68
SNX1-213ENST00000561026 Q86TA4 180 aa10.82□□□□□ -0.68
SNX1-213ENST00000561026 Q8N814 137 aa10.82□□□□□ -0.68
SNX1-213ENST00000561026 HIST1H2BAQ96A08 127 aa10.82□□□□□ -0.68
SNX1-213ENST00000561026 GAGE12JA6NER3 117 aa10.81□□□□□ -0.68
SNX1-213ENST00000561026 B4DEV8 164 aa10.81□□□□□ -0.68
SNX1-213ENST00000561026 LINC00694P0DN24 101 aa10.81□□□□□ -0.68
SNX1-213ENST00000561026 CRIP1P50238 77 aa10.81□□□□□ -0.68
SNX1-213ENST00000561026 FGF8P55075 233 aaPredicted RBP10.81□□□□□ -0.68
SNX1-213ENST00000561026 GAGE1Q13065 139 aa10.81□□□□□ -0.68
SNX1-213ENST00000561026 GAGE4Q13068 117 aa10.81□□□□□ -0.68
SNX1-213ENST00000561026 GAGE5Q13069 117 aa10.81□□□□□ -0.68
SNX1-213ENST00000561026 GAGE13Q4V321 117 aa10.81□□□□□ -0.68
SNX1-213ENST00000561026 DMRTA1Q5VZB9 504 aa10.81□□□□□ -0.68
SNX1-213ENST00000561026 SAMD10Q9BYL1 202 aa10.81□□□□□ -0.68
SNX1-213ENST00000561026 JPT2Q9H910 190 aa10.81□□□□□ -0.68
SNX1-213ENST00000561026 Q9UF83 564 aa10.81□□□□□ -0.68
SNX1-213ENST00000561026 HERC1Q15751 4861 aa10.81□□□□□ -0.68
SNX1-213ENST00000561026 DNLZQ5SXM8 178 aa10.8□□□□□ -0.68
SNX1-213ENST00000561026 COX8CQ7Z4L0 72 aa10.8□□□□□ -0.68
SNX1-213ENST00000561026 Q8N3U1 123 aa10.8□□□□□ -0.68
SNX1-213ENST00000561026 ZC2HC1AQ96GY0 325 aa10.8□□□□□ -0.68
SNX1-213ENST00000561026 ZFP30Q9Y2G7 519 aa10.8□□□□□ -0.68
SNX1-213ENST00000561026 KRBOX1C9JBD0 128 aa10.79□□□□□ -0.68
SNX1-213ENST00000561026 G3V3Q6 166 aa10.79□□□□□ -0.68
SNX1-213ENST00000561026 H3BVH4 76 aa10.79□□□□□ -0.68
SNX1-213ENST00000561026 SMR3BP02814 79 aaPredicted RBP10.79□□□□□ -0.68
SNX1-213ENST00000561026 TMEM70Q9BUB7 260 aa10.79□□□□□ -0.68
SNX1-213ENST00000561026 TM2D2Q9BX73 214 aa10.79□□□□□ -0.68
SNX1-213ENST00000561026 SRRM2Q9UQ35 2752 aaKnown RBP10.79□□□□□ -0.68
SNX1-213ENST00000561026 M0R036 132 aa10.78□□□□□ -0.68
SNX1-213ENST00000561026 ARMS2P0C7Q2 107 aa10.78□□□□□ -0.68
SNX1-213ENST00000561026 C14orf178Q8N769 122 aaPredicted RBP10.78□□□□□ -0.68
SNX1-213ENST00000561026 SYT8Q8NBV8 401 aa10.78□□□□□ -0.68
SNX1-213ENST00000561026 CYTL1Q9NRR1 136 aa10.78□□□□□ -0.68
SNX1-213ENST00000561026 DMBT1Q9UGM3 2413 aaPredicted RBP10.78□□□□□ -0.68
SNX1-213ENST00000561026 A0A087WWC5 75 aa10.77□□□□□ -0.68
SNX1-213ENST00000561026 TRAV8-3A0A0A6YYJ7 113 aa10.77□□□□□ -0.68
SNX1-213ENST00000561026 MAP1LC3B2A6NCE7 125 aa10.77□□□□□ -0.68
SNX1-213ENST00000561026 RHODO00212 210 aa10.77□□□□□ -0.68
SNX1-213ENST00000561026 SH2D1AO60880 128 aa10.77□□□□□ -0.68
SNX1-213ENST00000561026 HAMPP81172 84 aa10.77□□□□□ -0.68
SNX1-213ENST00000561026 FAM162BQ5T6X4 162 aa10.77□□□□□ -0.68
SNX1-213ENST00000561026 FMC1Q96HJ9 113 aa10.77□□□□□ -0.68
SNX1-213ENST00000561026 MAP1LC3BQ9GZQ8 125 aa10.77□□□□□ -0.68
SNX1-213ENST00000561026 GRIFINA4D1Z8 144 aa10.77□□□□□ -0.69
SNX1-213ENST00000561026 ARPC5O15511 151 aa10.77□□□□□ -0.69
SNX1-213ENST00000561026 DAZ4Q86SG3 579 aaKnown RBP10.77□□□□□ -0.69
SNX1-213ENST00000561026 OR11H4Q8NGC9 324 aa10.77□□□□□ -0.69
SNX1-213ENST00000561026 TCEAL7Q9BRU2 100 aa10.77□□□□□ -0.69
SNX1-213ENST00000561026 DAZ3Q9NR90 486 aaKnown RBP10.77□□□□□ -0.69
SNX1-213ENST00000561026 TRBV6-1A0A0K0K1D8 114 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms