RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 HIST1H2BCP62807 126 aa16.25■□□□□ 0.19
SNX22-205ENST00000560945 HIST2H2BEQ16778 126 aa16.25■□□□□ 0.19
SNX22-205ENST00000560945 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.25■□□□□ 0.19
SNX22-205ENST00000560945 HIST1H2BHQ93079 126 aa16.25■□□□□ 0.19
SNX22-205ENST00000560945 HIST1H2BNQ99877 126 aa16.25■□□□□ 0.19
SNX22-205ENST00000560945 HIST1H2BMQ99879 126 aa16.25■□□□□ 0.19
SNX22-205ENST00000560945 HLA-DQA1P01909 254 aa16.24■□□□□ 0.19
SNX22-205ENST00000560945 M0R381 172 aa16.24■□□□□ 0.19
SNX22-205ENST00000560945 MT-ND6P03923 174 aa16.24■□□□□ 0.19
SNX22-205ENST00000560945 COX19Q49B96 90 aa16.24■□□□□ 0.19
SNX22-205ENST00000560945 APCSP02743 223 aa16.23■□□□□ 0.19
SNX22-205ENST00000560945 EGFEM1PQ0D2K5 195 aa16.23■□□□□ 0.19
SNX22-205ENST00000560945 SPANXN1Q5VSR9 72 aa16.23■□□□□ 0.19
SNX22-205ENST00000560945 GATD1Q8NB37 220 aa16.23■□□□□ 0.19
SNX22-205ENST00000560945 CSNK1G2-AS1Q8NCQ2 148 aa16.23■□□□□ 0.19
SNX22-205ENST00000560945 C9orf85Q96MD7 179 aa16.23■□□□□ 0.19
SNX22-205ENST00000560945 C20orf144Q9BQM9 153 aa16.23■□□□□ 0.19
SNX22-205ENST00000560945 PKD1L1Q8TDX9 2849 aa16.23■□□□□ 0.19
SNX22-205ENST00000560945 MED14OSP0DP75 135 aa16.22■□□□□ 0.19
SNX22-205ENST00000560945 AZU1P20160 251 aa16.22■□□□□ 0.19
SNX22-205ENST00000560945 MORN3Q6PF18 240 aaPredicted RBP16.22■□□□□ 0.19
SNX22-205ENST00000560945 TMEM208Q9BTX3 173 aa16.22■□□□□ 0.19
SNX22-205ENST00000560945 PHLDA3Q9Y5J5 127 aa16.22■□□□□ 0.19
SNX22-205ENST00000560945 TRGV11A0A075B6L2 103 aa16.21■□□□□ 0.19
SNX22-205ENST00000560945 DMRTA1Q5VZB9 504 aa16.21■□□□□ 0.19
SNX22-205ENST00000560945 CSTL1Q9H114 145 aa16.21■□□□□ 0.19
SNX22-205ENST00000560945 IGHV4-4A0A075B6R2 117 aa16.2■□□□□ 0.18
SNX22-205ENST00000560945 A0A1B0GW15 77 aa16.2■□□□□ 0.18
SNX22-205ENST00000560945 ZNF493Q6ZR52 646 aa16.2■□□□□ 0.18
SNX22-205ENST00000560945 AMN1Q8IY45 258 aa16.2■□□□□ 0.18
SNX22-205ENST00000560945 CACNG7P62955 275 aa16.19■□□□□ 0.18
SNX22-205ENST00000560945 SAMD5Q5TGI4 173 aa16.19■□□□□ 0.18
SNX22-205ENST00000560945 LINC00467Q9BRT7 94 aa16.19■□□□□ 0.18
SNX22-205ENST00000560945 LOC102724200A0A096LPH7 203 aaPredicted RBP16.19■□□□□ 0.18
SNX22-205ENST00000560945 IGHV4-30-4P0DP06 118 aa16.19■□□□□ 0.18
SNX22-205ENST00000560945 EVI2AP22794 236 aa16.19■□□□□ 0.18
SNX22-205ENST00000560945 GSN-AS1Q9NRJ2 163 aa16.19■□□□□ 0.18
SNX22-205ENST00000560945 S100A8P05109 93 aa16.18■□□□□ 0.18
SNX22-205ENST00000560945 C11orf72Q8NBR9 251 aa16.18■□□□□ 0.18
SNX22-205ENST00000560945 JPT2Q9H910 190 aa16.18■□□□□ 0.18
SNX22-205ENST00000560945 TMEM256Q8N2U0 113 aa16.17■□□□□ 0.18
SNX22-205ENST00000560945 C1QTNF4Q9BXJ3 329 aa16.17■□□□□ 0.18
SNX22-205ENST00000560945 MUC4Q99102 2169 aa16.17■□□□□ 0.18
SNX22-205ENST00000560945 NXPH4O95158 308 aa16.17■□□□□ 0.18
SNX22-205ENST00000560945 NDUFA6P56556 154 aa16.17■□□□□ 0.18
SNX22-205ENST00000560945 RNF185Q96GF1 192 aa16.17■□□□□ 0.18
SNX22-205ENST00000560945 TMEM191AQ9H0A3 160 aa16.17■□□□□ 0.18
SNX22-205ENST00000560945 GOLT1BQ9Y3E0 138 aa16.17■□□□□ 0.18
SNX22-205ENST00000560945 SRIP30626 198 aa16.16■□□□□ 0.18
SNX22-205ENST00000560945 FAM104BQ5XKR9 115 aa16.16■□□□□ 0.18
SNX22-205ENST00000560945 MRPL51Q4U2R6 128 aaKnown RBP16.15■□□□□ 0.18
SNX22-205ENST00000560945 ZNF705AQ6ZN79 300 aaPredicted RBP16.15■□□□□ 0.18
SNX22-205ENST00000560945 SMKR1H3BMG3 65 aa16.14■□□□□ 0.17
SNX22-205ENST00000560945 GAS8-AS1O95177 125 aa16.14■□□□□ 0.17
SNX22-205ENST00000560945 ZNF415Q09FC8 603 aa16.14■□□□□ 0.17
SNX22-205ENST00000560945 ALKBH7Q9BT30 221 aaPredicted RBP16.14■□□□□ 0.17
SNX22-205ENST00000560945 RAB4AP20338 218 aa16.13■□□□□ 0.17
SNX22-205ENST00000560945 SNRPEP62304 92 aaKnown RBP16.13■□□□□ 0.17
SNX22-205ENST00000560945 C14orf178Q8N769 122 aaPredicted RBP16.13■□□□□ 0.17
SNX22-205ENST00000560945 RNASE8Q8TDE3 154 aaKnown RBP16.13■□□□□ 0.17
SNX22-205ENST00000560945 RCHY1Q96PM5 261 aa16.13■□□□□ 0.17
SNX22-205ENST00000560945 IQCJQ1A5X6 159 aa16.12■□□□□ 0.17
SNX22-205ENST00000560945 NCR2O95944 276 aa16.12■□□□□ 0.17
SNX22-205ENST00000560945 PRB2P02812 416 aaPredicted RBP16.12■□□□□ 0.17
SNX22-205ENST00000560945 ZNF876PQ49A33 203 aa16.11■□□□□ 0.17
SNX22-205ENST00000560945 SAMD10Q9BYL1 202 aa16.11■□□□□ 0.17
SNX22-205ENST00000560945 DEFB135Q30KP9 77 aa16.1■□□□□ 0.17
SNX22-205ENST00000560945 IL17DQ8TAD2 202 aa16.1■□□□□ 0.17
SNX22-205ENST00000560945 A0A087WWL8 130 aa16.1■□□□□ 0.17
SNX22-205ENST00000560945 TRAV26-2A0A0B4J265 109 aa16.1■□□□□ 0.17
SNX22-205ENST00000560945 KIR2DL5BA0A0G2JN68 375 aa16.1■□□□□ 0.17
SNX22-205ENST00000560945 KIR2DL5BA0A0G2JPC4 375 aa16.1■□□□□ 0.17
SNX22-205ENST00000560945 PLAC8L1A1L4L8 177 aa16.1■□□□□ 0.17
SNX22-205ENST00000560945 D6R8Y8 96 aa16.1■□□□□ 0.17
SNX22-205ENST00000560945 S100A6P06703 90 aa16.1■□□□□ 0.17
SNX22-205ENST00000560945 KIR2DL5AQ8N109 375 aa16.1■□□□□ 0.17
SNX22-205ENST00000560945 KIR2DL5BQ8NHK3 375 aa16.1■□□□□ 0.17
SNX22-205ENST00000560945 MRPL16Q9NX20 251 aaKnown RBP16.1■□□□□ 0.17
SNX22-205ENST00000560945 KIF25-AS1Q9Y6Z4 181 aa16.1■□□□□ 0.17
SNX22-205ENST00000560945 DNAH3Q8TD57 4116 aa16.09■□□□□ 0.17
SNX22-205ENST00000560945 GATA1P15976 413 aaPredicted RBP16.09■□□□□ 0.17
SNX22-205ENST00000560945 APOC4P55056 127 aa16.09■□□□□ 0.17
SNX22-205ENST00000560945 TMEM263Q8WUH6 116 aaKnown RBP16.09■□□□□ 0.17
SNX22-205ENST00000560945 AP1S3Q96PC3 154 aa16.09■□□□□ 0.17
SNX22-205ENST00000560945 SMIM15Q7Z3B0 74 aa16.08■□□□□ 0.17
SNX22-205ENST00000560945 SYT8Q8NBV8 401 aa16.08■□□□□ 0.17
SNX22-205ENST00000560945 C18orf32Q8TCD1 76 aa16.08■□□□□ 0.17
SNX22-205ENST00000560945 X6R8D5 127 aa16.08■□□□□ 0.17
SNX22-205ENST00000560945 C5orf52A6NGY3 159 aa16.08■□□□□ 0.16
SNX22-205ENST00000560945 M0R2P5 195 aa16.08■□□□□ 0.16
SNX22-205ENST00000560945 NUPR1O60356 82 aa16.08■□□□□ 0.16
SNX22-205ENST00000560945 MGPP08493 103 aa16.08■□□□□ 0.16
SNX22-205ENST00000560945 LINC00310P59036 64 aa16.08■□□□□ 0.16
SNX22-205ENST00000560945 LINC00315P59091 139 aa16.08■□□□□ 0.16
SNX22-205ENST00000560945 RRN3P1Q2M238 152 aa16.08■□□□□ 0.16
SNX22-205ENST00000560945 U3KQK5 164 aa16.08■□□□□ 0.16
SNX22-205ENST00000560945 DPH3P1Q9H4G8 78 aa16.07■□□□□ 0.16
SNX22-205ENST00000560945 ZMAT5Q9UDW3 170 aaKnown RBP16.07■□□□□ 0.16
SNX22-205ENST00000560945 CRYGDP07320 174 aa16.05■□□□□ 0.16
SNX22-205ENST00000560945 CKS2P33552 79 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms