RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 LRCOL1A6NCL2 159 aa12.42□□□□□ -0.42
TPM1-224ENST00000560615 A8MWV9 139 aa12.42□□□□□ -0.42
TPM1-224ENST00000560615 IGHV3-30P01768 117 aa12.42□□□□□ -0.42
TPM1-224ENST00000560615 IGHV3-33P01772 117 aa12.42□□□□□ -0.42
TPM1-224ENST00000560615 IGHV3-30-3P0DP02 117 aa12.42□□□□□ -0.42
TPM1-224ENST00000560615 IGHV3-30-5P0DP03 117 aa12.42□□□□□ -0.42
TPM1-224ENST00000560615 TOR2AQ5JU69 321 aa12.42□□□□□ -0.42
TPM1-224ENST00000560615 ZNF506Q5JVG8 444 aa12.42□□□□□ -0.42
TPM1-224ENST00000560615 Q8N814 137 aa12.42□□□□□ -0.42
TPM1-224ENST00000560615 TNFSF18Q9UNG2 199 aa12.42□□□□□ -0.42
TPM1-224ENST00000560615 PGPEP1LA6NFU8 196 aa12.41□□□□□ -0.42
TPM1-224ENST00000560615 A6NHS1 94 aa12.41□□□□□ -0.42
TPM1-224ENST00000560615 ATP6V0CP27449 155 aa12.41□□□□□ -0.42
TPM1-224ENST00000560615 ZNF80P51504 273 aaPredicted RBP12.41□□□□□ -0.42
TPM1-224ENST00000560615 PIK3CD-AS1Q5SR53 167 aa12.41□□□□□ -0.42
TPM1-224ENST00000560615 ZFP2Q6ZN57 461 aa12.41□□□□□ -0.42
TPM1-224ENST00000560615 AQP10Q96PS8 301 aa12.41□□□□□ -0.42
TPM1-224ENST00000560615 TRAV8-3A0A0A6YYJ7 113 aa12.4□□□□□ -0.42
TPM1-224ENST00000560615 SMR3BP02814 79 aaPredicted RBP12.4□□□□□ -0.42
TPM1-224ENST00000560615 FGF8P55075 233 aaPredicted RBP12.4□□□□□ -0.42
TPM1-224ENST00000560615 DPPA3Q6W0C5 159 aa12.4□□□□□ -0.42
TPM1-224ENST00000560615 C11orf21Q9P2W6 132 aa12.4□□□□□ -0.42
TPM1-224ENST00000560615 A0A087WWC5 75 aa12.39□□□□□ -0.43
TPM1-224ENST00000560615 A0A1W2PRE2 83 aa12.39□□□□□ -0.43
TPM1-224ENST00000560615 FABP5P3A8MUU1 101 aa12.39□□□□□ -0.43
TPM1-224ENST00000560615 C1QBP02746 253 aa12.39□□□□□ -0.43
TPM1-224ENST00000560615 SEC11BP0C7V7 166 aa12.39□□□□□ -0.43
TPM1-224ENST00000560615 ASIPP42127 132 aa12.39□□□□□ -0.43
TPM1-224ENST00000560615 LGALSLQ3ZCW2 172 aaPredicted RBP12.39□□□□□ -0.43
TPM1-224ENST00000560615 Q6ZSN1 163 aa12.39□□□□□ -0.43
TPM1-224ENST00000560615 INO80EQ8NBZ0 244 aaPredicted RBP12.39□□□□□ -0.43
TPM1-224ENST00000560615 MED28Q9H204 178 aa12.39□□□□□ -0.43
TPM1-224ENST00000560615 COX11Q9Y6N1 276 aa12.39□□□□□ -0.43
TPM1-224ENST00000560615 BORCS7-ASMTA0A0B4J1R7 106 aa12.38□□□□□ -0.43
TPM1-224ENST00000560615 IFNA7P01567 189 aa12.38□□□□□ -0.43
TPM1-224ENST00000560615 IGLV2-11P01706 119 aa12.38□□□□□ -0.43
TPM1-224ENST00000560615 RNASE3P12724 160 aaKnown RBP12.38□□□□□ -0.43
TPM1-224ENST00000560615 SYT8Q8NBV8 401 aa12.38□□□□□ -0.43
TPM1-224ENST00000560615 NKX6-2Q9C056 277 aaPredicted RBP12.38□□□□□ -0.43
TPM1-224ENST00000560615 ALG5Q9Y673 324 aa12.38□□□□□ -0.43
TPM1-224ENST00000560615 GGTLC3B5MD39 225 aa12.37□□□□□ -0.43
TPM1-224ENST00000560615 PARLQ9H300 379 aa12.37□□□□□ -0.43
TPM1-224ENST00000560615 URGCP-MRPS24S4R325 110 aa12.37□□□□□ -0.43
TPM1-224ENST00000560615 GAGE12JA6NER3 117 aa12.36□□□□□ -0.43
TPM1-224ENST00000560615 RHODO00212 210 aa12.36□□□□□ -0.43
TPM1-224ENST00000560615 GAGE1Q13065 139 aa12.36□□□□□ -0.43
TPM1-224ENST00000560615 GAGE4Q13068 117 aa12.36□□□□□ -0.43
TPM1-224ENST00000560615 GAGE5Q13069 117 aa12.36□□□□□ -0.43
TPM1-224ENST00000560615 GAGE13Q4V321 117 aa12.36□□□□□ -0.43
TPM1-224ENST00000560615 RMI2Q96E14 147 aa12.36□□□□□ -0.43
TPM1-224ENST00000560615 IL36BQ9NZH7 164 aa12.35□□□□□ -0.43
TPM1-224ENST00000560615 ARL2-SNX15V9GYD0 113 aa12.35□□□□□ -0.43
TPM1-224ENST00000560615 HIST1H2BAQ96A08 127 aa12.34□□□□□ -0.43
TPM1-224ENST00000560615 IGKV3D-20A0A0C4DH25 116 aa12.33□□□□□ -0.44
TPM1-224ENST00000560615 CTXND1A0A1B0GTU2 59 aa12.33□□□□□ -0.44
TPM1-224ENST00000560615 B4DEV8 164 aa12.33□□□□□ -0.44
TPM1-224ENST00000560615 PTTG1O95997 202 aa12.33□□□□□ -0.44
TPM1-224ENST00000560615 PLA2G1BP04054 148 aaKnown RBP12.33□□□□□ -0.44
TPM1-224ENST00000560615 KCNIP4Q6PIL6 250 aa12.33□□□□□ -0.44
TPM1-224ENST00000560615 OR2T35Q8NGX2 323 aa12.33□□□□□ -0.44
TPM1-224ENST00000560615 TRAV34A0A0B4J273 112 aa12.32□□□□□ -0.44
TPM1-224ENST00000560615 PEX7O00628 323 aa12.32□□□□□ -0.44
TPM1-224ENST00000560615 GIPP09681 153 aaPredicted RBP12.32□□□□□ -0.44
TPM1-224ENST00000560615 AKR1C8PQ5T2L2 129 aa12.32□□□□□ -0.44
TPM1-224ENST00000560615 OR11H4Q8NGC9 324 aa12.32□□□□□ -0.44
TPM1-224ENST00000560615 ZFP30Q9Y2G7 519 aa12.32□□□□□ -0.44
TPM1-224ENST00000560615 UBE2G1P62253 170 aa12.31□□□□□ -0.44
TPM1-224ENST00000560615 HAMPP81172 84 aa12.31□□□□□ -0.44
TPM1-224ENST00000560615 ELOBQ15370 118 aa12.31□□□□□ -0.44
TPM1-224ENST00000560615 LINC00479Q96M42 142 aa12.31□□□□□ -0.44
TPM1-224ENST00000560615 UBE2G2P60604 165 aa12.3□□□□□ -0.44
TPM1-224ENST00000560615 DNLZQ5SXM8 178 aa12.3□□□□□ -0.44
TPM1-224ENST00000560615 RPL7L1Q6DKI1 246 aaKnown RBP12.3□□□□□ -0.44
TPM1-224ENST00000560615 DAZ4Q86SG3 579 aaKnown RBP12.3□□□□□ -0.44
TPM1-224ENST00000560615 Q86TA4 180 aa12.3□□□□□ -0.44
TPM1-224ENST00000560615 BATF3Q9NR55 127 aa12.3□□□□□ -0.44
TPM1-224ENST00000560615 DAZ3Q9NR90 486 aaKnown RBP12.3□□□□□ -0.44
TPM1-224ENST00000560615 PHLDA3Q9Y5J5 127 aa12.3□□□□□ -0.44
TPM1-224ENST00000560615 H3BVH4 76 aa12.29□□□□□ -0.44
TPM1-224ENST00000560615 ARMS2P0C7Q2 107 aa12.29□□□□□ -0.44
TPM1-224ENST00000560615 LINC00694P0DN24 101 aa12.29□□□□□ -0.44
TPM1-224ENST00000560615 TPT1P13693 172 aaKnown RBP12.29□□□□□ -0.44
TPM1-224ENST00000560615 Q8N976 141 aa12.29□□□□□ -0.44
TPM1-224ENST00000560615 FMC1Q96HJ9 113 aa12.29□□□□□ -0.44
TPM1-224ENST00000560615 FXYD6-FXYD2A0A087WZ82 144 aa12.28□□□□□ -0.44
TPM1-224ENST00000560615 J3QL48 77 aa12.28□□□□□ -0.44
TPM1-224ENST00000560615 FAM162BQ5T6X4 162 aa12.28□□□□□ -0.44
TPM1-224ENST00000560615 FAM74A4Q5TZK3 123 aa12.28□□□□□ -0.44
TPM1-224ENST00000560615 DMRTA1Q5VZB9 504 aa12.28□□□□□ -0.44
TPM1-224ENST00000560615 STOML3Q8TAV4 291 aa12.28□□□□□ -0.44
TPM1-224ENST00000560615 TCEAL7Q9BRU2 100 aa12.28□□□□□ -0.44
TPM1-224ENST00000560615 CHCHD7Q9BUK0 85 aa12.28□□□□□ -0.44
TPM1-224ENST00000560615 SAMD10Q9BYL1 202 aa12.28□□□□□ -0.44
TPM1-224ENST00000560615 A0A087WX48 190 aa12.27□□□□□ -0.45
TPM1-224ENST00000560615 FAM74A7A6NL05 159 aa12.27□□□□□ -0.45
TPM1-224ENST00000560615 KRBOX1C9JBD0 128 aa12.27□□□□□ -0.45
TPM1-224ENST00000560615 M0R036 132 aa12.27□□□□□ -0.45
TPM1-224ENST00000560615 UFSP1Q6NVU6 142 aa12.27□□□□□ -0.45
TPM1-224ENST00000560615 COX8CQ7Z4L0 72 aa12.27□□□□□ -0.45
TPM1-224ENST00000560615 C14orf178Q8N769 122 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms