RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 CFAP126Q5VTH2 177 aa9.59□□□□□ -0.87
TPM1-223ENST00000560445 ZFP2Q6ZN57 461 aa9.59□□□□□ -0.87
TPM1-223ENST00000560445 Q6ZRN7 208 aaPredicted RBP9.59□□□□□ -0.87
TPM1-223ENST00000560445 WFDC10BQ8IUB3 73 aa9.59□□□□□ -0.87
TPM1-223ENST00000560445 MAPKAPK5-AS1Q8N8E1 139 aa9.59□□□□□ -0.87
TPM1-223ENST00000560445 FMC1Q96HJ9 113 aa9.59□□□□□ -0.87
TPM1-223ENST00000560445 KRTAP17-1Q9BYP8 105 aa9.59□□□□□ -0.87
TPM1-223ENST00000560445 PCLOQ9Y6V0 5065 aa9.58□□□□□ -0.88
TPM1-223ENST00000560445 DYNC1H1Q14204 4646 aaKnown RBP9.58□□□□□ -0.88
TPM1-223ENST00000560445 A0A0D9SG52 128 aa9.58□□□□□ -0.88
TPM1-223ENST00000560445 MAP1LC3B2A6NCE7 125 aa9.58□□□□□ -0.88
TPM1-223ENST00000560445 PSCAO43653 123 aa9.58□□□□□ -0.88
TPM1-223ENST00000560445 FHITP49789 147 aa9.58□□□□□ -0.88
TPM1-223ENST00000560445 ZNF80P51504 273 aaPredicted RBP9.58□□□□□ -0.88
TPM1-223ENST00000560445 EIF5AP63241 154 aaKnown RBP9.58□□□□□ -0.88
TPM1-223ENST00000560445 ZNF726P1Q15940 193 aa9.58□□□□□ -0.88
TPM1-223ENST00000560445 LINC01556Q5JQF7 62 aa9.58□□□□□ -0.88
TPM1-223ENST00000560445 OR10J3Q5JRS4 329 aa9.58□□□□□ -0.88
TPM1-223ENST00000560445 Q86TA4 180 aa9.58□□□□□ -0.88
TPM1-223ENST00000560445 KCNRGQ8N5I3 272 aa9.58□□□□□ -0.88
TPM1-223ENST00000560445 SLC25A29Q8N8R3 303 aa9.58□□□□□ -0.88
TPM1-223ENST00000560445 MAP1LC3BQ9GZQ8 125 aa9.58□□□□□ -0.88
TPM1-223ENST00000560445 CYTL1Q9NRR1 136 aa9.58□□□□□ -0.88
TPM1-223ENST00000560445 KANTRA0A1W2PQU2 76 aa9.57□□□□□ -0.88
TPM1-223ENST00000560445 HMSDA8MTL9 139 aa9.57□□□□□ -0.88
TPM1-223ENST00000560445 UMAD1C9J7I0 102 aa9.57□□□□□ -0.88
TPM1-223ENST00000560445 G3V3Q6 166 aa9.57□□□□□ -0.88
TPM1-223ENST00000560445 FGF8P55075 233 aaPredicted RBP9.57□□□□□ -0.88
TPM1-223ENST00000560445 ZNF506Q5JVG8 444 aa9.57□□□□□ -0.88
TPM1-223ENST00000560445 FAM162BQ5T6X4 162 aa9.57□□□□□ -0.88
TPM1-223ENST00000560445 IL36BQ9NZH7 164 aa9.57□□□□□ -0.88
TPM1-223ENST00000560445 A0A087WWC5 75 aa9.56□□□□□ -0.88
TPM1-223ENST00000560445 TRAV34A0A0B4J273 112 aa9.56□□□□□ -0.88
TPM1-223ENST00000560445 FAM74A7A6NL05 159 aa9.56□□□□□ -0.88
TPM1-223ENST00000560445 B4DEV8 164 aa9.56□□□□□ -0.88
TPM1-223ENST00000560445 SMLR1H3BR10 107 aa9.56□□□□□ -0.88
TPM1-223ENST00000560445 S100A9P06702 114 aaKnown RBP9.56□□□□□ -0.88
TPM1-223ENST00000560445 SEC11BP0C7V7 166 aa9.56□□□□□ -0.88
TPM1-223ENST00000560445 KRTAP10-2P60368 255 aa9.56□□□□□ -0.88
TPM1-223ENST00000560445 LGALSLQ3ZCW2 172 aaPredicted RBP9.56□□□□□ -0.88
TPM1-223ENST00000560445 TOR2AQ5JU69 321 aa9.56□□□□□ -0.88
TPM1-223ENST00000560445 LELP1Q5T871 98 aa9.56□□□□□ -0.88
TPM1-223ENST00000560445 CST9LP1Q5W188 147 aa9.56□□□□□ -0.88
TPM1-223ENST00000560445 ATP6V0E2Q8NHE4 81 aa9.56□□□□□ -0.88
TPM1-223ENST00000560445 LINC00479Q96M42 142 aa9.56□□□□□ -0.88
TPM1-223ENST00000560445 GTSF1LQ9H1H1 148 aa9.56□□□□□ -0.88
TPM1-223ENST00000560445 PFDN1O60925 122 aa9.55□□□□□ -0.88
TPM1-223ENST00000560445 LAGE3Q14657 143 aa9.55□□□□□ -0.88
TPM1-223ENST00000560445 DPPA3Q6W0C5 159 aa9.55□□□□□ -0.88
TPM1-223ENST00000560445 COX8CQ7Z4L0 72 aa9.55□□□□□ -0.88
TPM1-223ENST00000560445 Q8N1X5 172 aa9.55□□□□□ -0.88
TPM1-223ENST00000560445 ZNF471Q9BX82 626 aaPredicted RBP9.55□□□□□ -0.88
TPM1-223ENST00000560445 C11orf21Q9P2W6 132 aa9.55□□□□□ -0.88
TPM1-223ENST00000560445 A0A087WTM6 91 aa9.54□□□□□ -0.88
TPM1-223ENST00000560445 TRBV6-1A0A0K0K1D8 114 aa9.54□□□□□ -0.88
TPM1-223ENST00000560445 LOC100131303A0A0U1RQF7 123 aa9.54□□□□□ -0.88
TPM1-223ENST00000560445 PGPEP1LA6NFU8 196 aa9.54□□□□□ -0.88
TPM1-223ENST00000560445 RNASE3P12724 160 aaKnown RBP9.54□□□□□ -0.88
TPM1-223ENST00000560445 DNLZQ5SXM8 178 aa9.54□□□□□ -0.88
TPM1-223ENST00000560445 OR11H4Q8NGC9 324 aa9.54□□□□□ -0.88
TPM1-223ENST00000560445 SFT2D1Q8WV19 159 aa9.54□□□□□ -0.88
TPM1-223ENST00000560445 TM2D2Q9BX73 214 aa9.54□□□□□ -0.88
TPM1-223ENST00000560445 RYR1P21817 5038 aa9.54□□□□□ -0.88
TPM1-223ENST00000560445 IGHV3-73A0A0B4J1V6 119 aa9.53□□□□□ -0.88
TPM1-223ENST00000560445 IBA57-AS1B1ANH7 110 aa9.53□□□□□ -0.88
TPM1-223ENST00000560445 BCL2L11O43521 198 aa9.53□□□□□ -0.88
TPM1-223ENST00000560445 TPT1P13693 172 aaKnown RBP9.53□□□□□ -0.88
TPM1-223ENST00000560445 AKR1C3P42330 323 aa9.53□□□□□ -0.88
TPM1-223ENST00000560445 FAM213BQ8TBF2 198 aa9.53□□□□□ -0.88
TPM1-223ENST00000560445 NTN5Q8WTR8 489 aaPredicted RBP9.53□□□□□ -0.88
TPM1-223ENST00000560445 PARLQ9H300 379 aa9.53□□□□□ -0.88
TPM1-223ENST00000560445 PHLDA3Q9Y5J5 127 aa9.53□□□□□ -0.88
TPM1-223ENST00000560445 IGKV3D-20A0A0C4DH25 116 aa9.52□□□□□ -0.89
TPM1-223ENST00000560445 ZFP82Q8N141 532 aa9.52□□□□□ -0.89
TPM1-223ENST00000560445 SCRT2Q9NQ03 307 aa9.52□□□□□ -0.89
TPM1-223ENST00000560445 URGCP-MRPS24S4R325 110 aa9.52□□□□□ -0.89
TPM1-223ENST00000560445 KRBOX1C9JBD0 128 aa9.51□□□□□ -0.89
TPM1-223ENST00000560445 TEX46H3BTG2 121 aa9.51□□□□□ -0.89
TPM1-223ENST00000560445 H3BVH4 76 aa9.51□□□□□ -0.89
TPM1-223ENST00000560445 LTAP01374 205 aa9.51□□□□□ -0.89
TPM1-223ENST00000560445 H2AFB1P0C5Y9 115 aa9.51□□□□□ -0.89
TPM1-223ENST00000560445 EIF5AL1Q6IS14 154 aaKnown RBP9.51□□□□□ -0.89
TPM1-223ENST00000560445 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.51□□□□□ -0.89
TPM1-223ENST00000560445 MBD3L1Q8WWY6 194 aa9.51□□□□□ -0.89
TPM1-223ENST00000560445 ZC2HC1AQ96GY0 325 aa9.51□□□□□ -0.89
TPM1-223ENST00000560445 COX11Q9Y6N1 276 aa9.51□□□□□ -0.89
TPM1-223ENST00000560445 TRAV8-3A0A0A6YYJ7 113 aa9.5□□□□□ -0.89
TPM1-223ENST00000560445 M0R036 132 aa9.5□□□□□ -0.89
TPM1-223ENST00000560445 PAGE4O60829 102 aa9.5□□□□□ -0.89
TPM1-223ENST00000560445 SH2D1AO60880 128 aa9.5□□□□□ -0.89
TPM1-223ENST00000560445 ARMS2P0C7Q2 107 aa9.5□□□□□ -0.89
TPM1-223ENST00000560445 ZNF674Q2M3X9 581 aa9.5□□□□□ -0.89
TPM1-223ENST00000560445 LINC01559Q495D7 138 aa9.5□□□□□ -0.89
TPM1-223ENST00000560445 KCNIP4Q6PIL6 250 aa9.5□□□□□ -0.89
TPM1-223ENST00000560445 RMI2Q96E14 147 aa9.5□□□□□ -0.89
TPM1-223ENST00000560445 TRBV10-1A0A0K0K1A3 114 aa9.49□□□□□ -0.89
TPM1-223ENST00000560445 GCSHP23434 173 aa9.49□□□□□ -0.89
TPM1-223ENST00000560445 TMUB2Q71RG4 321 aa9.49□□□□□ -0.89
TPM1-223ENST00000560445 TNFRSF18Q9Y5U5 241 aa9.49□□□□□ -0.89
TPM1-223ENST00000560445 IGLV5-52A0A0A0MRZ9 124 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms