RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 SMUG1Q53HV7 270 aa9.73□□□□□ -0.85
SMAD3-214ENST00000560402 FAM162BQ5T6X4 162 aa9.73□□□□□ -0.85
SMAD3-214ENST00000560402 SNURFLB1AK76 121 aa9.72□□□□□ -0.85
SMAD3-214ENST00000560402 COX8CQ7Z4L0 72 aa9.72□□□□□ -0.85
SMAD3-214ENST00000560402 ZNF738Q8NE65 137 aa9.72□□□□□ -0.85
SMAD3-214ENST00000560402 OR10J6PQ8NGY7 276 aa9.72□□□□□ -0.85
SMAD3-214ENST00000560402 MRPL18Q9H0U6 180 aaKnown RBP9.72□□□□□ -0.85
SMAD3-214ENST00000560402 KIAA1109Q2LD37 5005 aa9.71□□□□□ -0.85
SMAD3-214ENST00000560402 A0A1B0GW15 77 aa9.71□□□□□ -0.86
SMAD3-214ENST00000560402 HIGD1CA8MV81 97 aa9.71□□□□□ -0.86
SMAD3-214ENST00000560402 NPIPB6E9PJ23 425 aa9.71□□□□□ -0.86
SMAD3-214ENST00000560402 SOCS3O14543 225 aa9.71□□□□□ -0.86
SMAD3-214ENST00000560402 SPART-AS1P0CW21 52 aa9.71□□□□□ -0.86
SMAD3-214ENST00000560402 MRPL54Q6P161 138 aaKnown RBP9.71□□□□□ -0.86
SMAD3-214ENST00000560402 POM121L12Q8N7R1 296 aa9.71□□□□□ -0.86
SMAD3-214ENST00000560402 ZC2HC1AQ96GY0 325 aa9.71□□□□□ -0.86
SMAD3-214ENST00000560402 LENEPQ9Y5L5 61 aa9.71□□□□□ -0.86
SMAD3-214ENST00000560402 DNAH17Q9UFH2 4485 aa9.71□□□□□ -0.86
SMAD3-214ENST00000560402 FAT2Q9NYQ8 4349 aa9.7□□□□□ -0.86
SMAD3-214ENST00000560402 HOXA5P20719 270 aa9.7□□□□□ -0.86
SMAD3-214ENST00000560402 ZNF138P52744 262 aa9.7□□□□□ -0.86
SMAD3-214ENST00000560402 GDF5OSQ5U4N7 250 aa9.7□□□□□ -0.86
SMAD3-214ENST00000560402 NUP35Q8NFH5 326 aa9.7□□□□□ -0.86
SMAD3-214ENST00000560402 KRTAP17-1Q9BYP8 105 aa9.7□□□□□ -0.86
SMAD3-214ENST00000560402 GOLT1BQ9Y3E0 138 aa9.7□□□□□ -0.86
SMAD3-214ENST00000560402 PKHD1P08F94 4074 aa9.69□□□□□ -0.86
SMAD3-214ENST00000560402 HBBP68871 147 aa9.69□□□□□ -0.86
SMAD3-214ENST00000560402 RIGQ13278 110 aa9.69□□□□□ -0.86
SMAD3-214ENST00000560402 EBLN2Q6P2I7 272 aa9.69□□□□□ -0.86
SMAD3-214ENST00000560402 C9orf47Q6ZRZ4 202 aa9.69□□□□□ -0.86
SMAD3-214ENST00000560402 RNF182Q8N6D2 247 aa9.69□□□□□ -0.86
SMAD3-214ENST00000560402 VGLL1Q99990 258 aa9.69□□□□□ -0.86
SMAD3-214ENST00000560402 PPP1R14DQ9NXH3 145 aa9.69□□□□□ -0.86
SMAD3-214ENST00000560402 PCLOQ9Y6V0 5065 aa9.69□□□□□ -0.86
SMAD3-214ENST00000560402 DNAH2Q9P225 4427 aa9.68□□□□□ -0.86
SMAD3-214ENST00000560402 TRAV8-2A0A0B4J237 113 aa9.68□□□□□ -0.86
SMAD3-214ENST00000560402 FABP5P3A8MUU1 101 aa9.68□□□□□ -0.86
SMAD3-214ENST00000560402 PHOX2AO14813 284 aa9.68□□□□□ -0.86
SMAD3-214ENST00000560402 SPINK4O60575 86 aa9.68□□□□□ -0.86
SMAD3-214ENST00000560402 SH2D1AO60880 128 aa9.68□□□□□ -0.86
SMAD3-214ENST00000560402 IGKV3-20P01619 116 aa9.68□□□□□ -0.86
SMAD3-214ENST00000560402 APCSP02743 223 aa9.68□□□□□ -0.86
SMAD3-214ENST00000560402 HIST1H1AQ02539 215 aaPredicted RBP9.68□□□□□ -0.86
SMAD3-214ENST00000560402 LGALS9BQ3B8N2 356 aa9.68□□□□□ -0.86
SMAD3-214ENST00000560402 COA6Q5JTJ3 125 aaKnown RBP9.68□□□□□ -0.86
SMAD3-214ENST00000560402 IGFL4Q6B9Z1 124 aa9.68□□□□□ -0.86
SMAD3-214ENST00000560402 LINC00477Q96M19 166 aa9.68□□□□□ -0.86
SMAD3-214ENST00000560402 DKK2Q9UBU2 259 aa9.68□□□□□ -0.86
SMAD3-214ENST00000560402 IGHV3OR16-12A0A075B7B8 117 aa9.67□□□□□ -0.86
SMAD3-214ENST00000560402 A0A0J9YX75 114 aa9.67□□□□□ -0.86
SMAD3-214ENST00000560402 A0A1B0GVY2 172 aa9.67□□□□□ -0.86
SMAD3-214ENST00000560402 A8MTW9 85 aa9.67□□□□□ -0.86
SMAD3-214ENST00000560402 CRISP2P16562 243 aa9.67□□□□□ -0.86
SMAD3-214ENST00000560402 TMEM136Q6ZRR5 245 aa9.67□□□□□ -0.86
SMAD3-214ENST00000560402 Q8TAT8 98 aa9.67□□□□□ -0.86
SMAD3-214ENST00000560402 PGLYRP4Q96LB8 373 aa9.67□□□□□ -0.86
SMAD3-214ENST00000560402 C8orf49Q96NF6 230 aa9.67□□□□□ -0.86
SMAD3-214ENST00000560402 TRBV7-9A0A0J9YWB2 115 aa9.66□□□□□ -0.86
SMAD3-214ENST00000560402 A0A1B0GUT8 65 aa9.66□□□□□ -0.86
SMAD3-214ENST00000560402 EMP1P54849 157 aa9.66□□□□□ -0.86
SMAD3-214ENST00000560402 FOXA3P55318 350 aaPredicted RBP9.66□□□□□ -0.86
SMAD3-214ENST00000560402 FXYD7P58549 80 aa9.66□□□□□ -0.86
SMAD3-214ENST00000560402 FAM222AQ5U5X8 452 aa9.66□□□□□ -0.86
SMAD3-214ENST00000560402 UBE2DNLQ8IWF7 75 aa9.66□□□□□ -0.86
SMAD3-214ENST00000560402 SMIM6P0DI80 62 aa9.65□□□□□ -0.86
SMAD3-214ENST00000560402 DEFB1P60022 68 aa9.65□□□□□ -0.86
SMAD3-214ENST00000560402 RRN3P1Q2M238 152 aa9.65□□□□□ -0.86
SMAD3-214ENST00000560402 TMEM18Q96B42 140 aa9.65□□□□□ -0.86
SMAD3-214ENST00000560402 AGPAT4-IT1Q9H0P7 198 aa9.65□□□□□ -0.86
SMAD3-214ENST00000560402 A0A1B0GXF2 115 aa9.64□□□□□ -0.87
SMAD3-214ENST00000560402 PRSS29PA6NIE9 313 aa9.64□□□□□ -0.87
SMAD3-214ENST00000560402 PRAC2D3DTV9 90 aa9.64□□□□□ -0.87
SMAD3-214ENST00000560402 ORM1P02763 201 aa9.64□□□□□ -0.87
SMAD3-214ENST00000560402 CAMPP49913 170 aa9.64□□□□□ -0.87
SMAD3-214ENST00000560402 ERCC8Q13216 396 aa9.64□□□□□ -0.87
SMAD3-214ENST00000560402 OR10J3Q5JRS4 329 aa9.64□□□□□ -0.87
SMAD3-214ENST00000560402 BAGE3Q86Y29 109 aa9.64□□□□□ -0.87
SMAD3-214ENST00000560402 C1orf158Q8N1D5 194 aa9.64□□□□□ -0.87
SMAD3-214ENST00000560402 HIST3H2BBQ8N257 126 aa9.64□□□□□ -0.87
SMAD3-214ENST00000560402 F6UB75 175 aa9.63□□□□□ -0.87
SMAD3-214ENST00000560402 RTL8CO15255 209 aa9.63□□□□□ -0.87
SMAD3-214ENST00000560402 DUSP14O95147 198 aaKnown RBP9.63□□□□□ -0.87
SMAD3-214ENST00000560402 MED14OSP0DP75 135 aa9.63□□□□□ -0.87
SMAD3-214ENST00000560402 LINC01559Q495D7 138 aa9.63□□□□□ -0.87
SMAD3-214ENST00000560402 FER1L6-AS1Q8NA97 138 aa9.63□□□□□ -0.87
SMAD3-214ENST00000560402 C15orf53Q8NAA6 179 aa9.63□□□□□ -0.87
SMAD3-214ENST00000560402 OR8A1Q8NGG7 326 aa9.63□□□□□ -0.87
SMAD3-214ENST00000560402 GTSF1Q8WW33 167 aa9.63□□□□□ -0.87
SMAD3-214ENST00000560402 TPPP3Q9BW30 176 aa9.63□□□□□ -0.87
SMAD3-214ENST00000560402 NACAE9PAV3 2078 aa9.63□□□□□ -0.87
SMAD3-214ENST00000560402 DNAH11Q96DT5 4516 aa9.63□□□□□ -0.87
SMAD3-214ENST00000560402 TRAV21A0A0B4J279 112 aa9.62□□□□□ -0.87
SMAD3-214ENST00000560402 F2Z2F3 143 aa9.62□□□□□ -0.87
SMAD3-214ENST00000560402 INSP01308 110 aa9.62□□□□□ -0.87
SMAD3-214ENST00000560402 LEPP41159 167 aa9.62□□□□□ -0.87
SMAD3-214ENST00000560402 CRIP1P50238 77 aa9.62□□□□□ -0.87
SMAD3-214ENST00000560402 DAD1P61803 113 aa9.62□□□□□ -0.87
SMAD3-214ENST00000560402 Q0VG73 95 aa9.62□□□□□ -0.87
SMAD3-214ENST00000560402 AMTNQ6UX39 209 aa9.62□□□□□ -0.87
SMAD3-214ENST00000560402 TMEM208Q9BTX3 173 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms