RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 RBAKDNA6NC62 111 aa8.4□□□□□ -1.06
RABGGTA-213ENST00000560127 PGPA6NDG6 321 aa8.4□□□□□ -1.06
RABGGTA-213ENST00000560127 IGLV2-8P01709 118 aa8.4□□□□□ -1.06
RABGGTA-213ENST00000560127 MBP02144 154 aa8.4□□□□□ -1.06
RABGGTA-213ENST00000560127 PPT1P50897 306 aa8.4□□□□□ -1.06
RABGGTA-213ENST00000560127 FGF8P55075 233 aaPredicted RBP8.4□□□□□ -1.06
RABGGTA-213ENST00000560127 RASL10AQ92737 203 aa8.4□□□□□ -1.06
RABGGTA-213ENST00000560127 DAZAP1Q96EP5 407 aaKnown RBP8.4□□□□□ -1.06
RABGGTA-213ENST00000560127 TM2D2Q9BX73 214 aa8.4□□□□□ -1.06
RABGGTA-213ENST00000560127 ACTR3CQ9C0K3 210 aaPredicted RBP8.4□□□□□ -1.06
RABGGTA-213ENST00000560127 A0A0D9SG52 128 aa8.39□□□□□ -1.07
RABGGTA-213ENST00000560127 CXorf1O96002 111 aa8.39□□□□□ -1.07
RABGGTA-213ENST00000560127 IGLV2-11P01706 119 aa8.39□□□□□ -1.07
RABGGTA-213ENST00000560127 NMBP08949 121 aa8.39□□□□□ -1.07
RABGGTA-213ENST00000560127 ZNF138P52744 262 aa8.39□□□□□ -1.07
RABGGTA-213ENST00000560127 TDRG1Q3Y452 100 aa8.39□□□□□ -1.07
RABGGTA-213ENST00000560127 GOLT1AQ6ZVE7 132 aa8.39□□□□□ -1.07
RABGGTA-213ENST00000560127 SH2D6Q7Z4S9 175 aa8.39□□□□□ -1.07
RABGGTA-213ENST00000560127 HYLS1Q96M11 299 aa8.39□□□□□ -1.07
RABGGTA-213ENST00000560127 ZNF471Q9BX82 626 aaPredicted RBP8.39□□□□□ -1.07
RABGGTA-213ENST00000560127 TRAV8-6A0A0B4J262 113 aa8.38□□□□□ -1.07
RABGGTA-213ENST00000560127 LAGE3Q14657 143 aa8.38□□□□□ -1.07
RABGGTA-213ENST00000560127 OR10J3Q5JRS4 329 aa8.38□□□□□ -1.07
RABGGTA-213ENST00000560127 AKR1C8PQ5T2L2 129 aa8.38□□□□□ -1.07
RABGGTA-213ENST00000560127 NHLRC2Q8NBF2 726 aa8.38□□□□□ -1.07
RABGGTA-213ENST00000560127 STOML3Q8TAV4 291 aa8.38□□□□□ -1.07
RABGGTA-213ENST00000560127 RPH3ALQ9UNE2 315 aa8.38□□□□□ -1.07
RABGGTA-213ENST00000560127 TRAV4A0A0B4J268 109 aa8.37□□□□□ -1.07
RABGGTA-213ENST00000560127 TRBV7-9A0A0J9YWB2 115 aa8.37□□□□□ -1.07
RABGGTA-213ENST00000560127 MAP1LC3B2A6NCE7 125 aa8.37□□□□□ -1.07
RABGGTA-213ENST00000560127 SEC11BP0C7V7 166 aa8.37□□□□□ -1.07
RABGGTA-213ENST00000560127 RPL37AP61513 92 aaKnown RBP8.37□□□□□ -1.07
RABGGTA-213ENST00000560127 TMEM78Q5T7P6 136 aa8.37□□□□□ -1.07
RABGGTA-213ENST00000560127 Q8N3U1 123 aa8.37□□□□□ -1.07
RABGGTA-213ENST00000560127 C9orf62Q8N4C0 152 aa8.37□□□□□ -1.07
RABGGTA-213ENST00000560127 TMED6Q8WW62 240 aa8.37□□□□□ -1.07
RABGGTA-213ENST00000560127 SGK494Q96LW2 274 aa8.37□□□□□ -1.07
RABGGTA-213ENST00000560127 MAP1LC3BQ9GZQ8 125 aa8.37□□□□□ -1.07
RABGGTA-213ENST00000560127 TMEM167BQ9NRX6 74 aa8.37□□□□□ -1.07
RABGGTA-213ENST00000560127 KANTRA0A1W2PQU2 76 aa8.36□□□□□ -1.07
RABGGTA-213ENST00000560127 RBFOX3A6NFN3 312 aa8.36□□□□□ -1.07
RABGGTA-213ENST00000560127 TCRAP04437 139 aa8.36□□□□□ -1.07
RABGGTA-213ENST00000560127 ASIPP42127 132 aa8.36□□□□□ -1.07
RABGGTA-213ENST00000560127 CSN1S1P47710 185 aa8.36□□□□□ -1.07
RABGGTA-213ENST00000560127 UBE2G2P60604 165 aa8.36□□□□□ -1.07
RABGGTA-213ENST00000560127 MUC21Q5SSG8 566 aa8.36□□□□□ -1.07
RABGGTA-213ENST00000560127 AKAP14Q86UN6 197 aa8.36□□□□□ -1.07
RABGGTA-213ENST00000560127 ARL6IP6Q8N6S5 226 aa8.36□□□□□ -1.07
RABGGTA-213ENST00000560127 C5orf17Q8NAS9 161 aa8.36□□□□□ -1.07
RABGGTA-213ENST00000560127 BAALCQ8WXS3 180 aa8.36□□□□□ -1.07
RABGGTA-213ENST00000560127 BOLA1Q9Y3E2 137 aa8.36□□□□□ -1.07
RABGGTA-213ENST00000560127 A0A1W2PRE2 83 aa8.35□□□□□ -1.07
RABGGTA-213ENST00000560127 FAM74A7A6NL05 159 aa8.35□□□□□ -1.07
RABGGTA-213ENST00000560127 F6UZH7 168 aa8.35□□□□□ -1.07
RABGGTA-213ENST00000560127 ZNF80P51504 273 aaPredicted RBP8.35□□□□□ -1.07
RABGGTA-213ENST00000560127 SUMO1P63165 101 aaKnown RBP8.35□□□□□ -1.07
RABGGTA-213ENST00000560127 LELP1Q5T871 98 aa8.35□□□□□ -1.07
RABGGTA-213ENST00000560127 Q6AWC8 147 aa8.35□□□□□ -1.07
RABGGTA-213ENST00000560127 OR4C5Q8NGB2 326 aa8.35□□□□□ -1.07
RABGGTA-213ENST00000560127 MBD3L1Q8WWY6 194 aa8.35□□□□□ -1.07
RABGGTA-213ENST00000560127 LINC00479Q96M42 142 aa8.35□□□□□ -1.07
RABGGTA-213ENST00000560127 SPXQ9BT56 116 aa8.35□□□□□ -1.07
RABGGTA-213ENST00000560127 IGHV3-16A0A0C4DH30 117 aa8.34□□□□□ -1.07
RABGGTA-213ENST00000560127 PFDN1O60925 122 aa8.34□□□□□ -1.07
RABGGTA-213ENST00000560127 PFN1P07737 140 aaKnown RBP8.34□□□□□ -1.07
RABGGTA-213ENST00000560127 GATA1P15976 413 aaPredicted RBP8.34□□□□□ -1.07
RABGGTA-213ENST00000560127 CMTM2Q8TAZ6 248 aa8.34□□□□□ -1.07
RABGGTA-213ENST00000560127 FAM213BQ8TBF2 198 aa8.34□□□□□ -1.07
RABGGTA-213ENST00000560127 C11orf21Q9P2W6 132 aa8.34□□□□□ -1.07
RABGGTA-213ENST00000560127 EPDR1Q9UM22 224 aa8.34□□□□□ -1.07
RABGGTA-213ENST00000560127 LENEPQ9Y5L5 61 aa8.34□□□□□ -1.07
RABGGTA-213ENST00000560127 TRAV8-3A0A0A6YYJ7 113 aa8.33□□□□□ -1.08
RABGGTA-213ENST00000560127 A0A1B0GV50 99 aa8.33□□□□□ -1.08
RABGGTA-213ENST00000560127 TPT1P13693 172 aaKnown RBP8.33□□□□□ -1.08
RABGGTA-213ENST00000560127 TMEM183BQ1AE95 376 aa8.33□□□□□ -1.08
RABGGTA-213ENST00000560127 FAM74A1Q5RGS3 127 aa8.33□□□□□ -1.08
RABGGTA-213ENST00000560127 TMEM183AQ8IXX5 376 aa8.33□□□□□ -1.08
RABGGTA-213ENST00000560127 TRAV34A0A0B4J273 112 aa8.32□□□□□ -1.08
RABGGTA-213ENST00000560127 UMAD1C9J7I0 102 aa8.32□□□□□ -1.08
RABGGTA-213ENST00000560127 NKX2-5P52952 324 aaPredicted RBP8.32□□□□□ -1.08
RABGGTA-213ENST00000560127 CCL20P78556 96 aa8.32□□□□□ -1.08
RABGGTA-213ENST00000560127 CYB561D1Q8N8Q1 229 aa8.32□□□□□ -1.08
RABGGTA-213ENST00000560127 Q8N976 141 aa8.32□□□□□ -1.08
RABGGTA-213ENST00000560127 TMEM75Q8N9X5 138 aa8.32□□□□□ -1.08
RABGGTA-213ENST00000560127 PSG8Q9UQ74 426 aa8.32□□□□□ -1.08
RABGGTA-213ENST00000560127 PEX7O00628 323 aa8.31□□□□□ -1.08
RABGGTA-213ENST00000560127 FLI1Q01543 452 aaPredicted RBP8.31□□□□□ -1.08
RABGGTA-213ENST00000560127 DPPA3Q6W0C5 159 aa8.31□□□□□ -1.08
RABGGTA-213ENST00000560127 Q86TA4 180 aa8.31□□□□□ -1.08
RABGGTA-213ENST00000560127 SLC25A29Q8N8R3 303 aa8.31□□□□□ -1.08
RABGGTA-213ENST00000560127 SFT2D1Q8WV19 159 aa8.31□□□□□ -1.08
RABGGTA-213ENST00000560127 TREM1Q9NP99 234 aa8.31□□□□□ -1.08
RABGGTA-213ENST00000560127 TRGV11A0A075B6L2 103 aa8.3□□□□□ -1.08
RABGGTA-213ENST00000560127 SERTM2A0A1B0GWG4 89 aa8.3□□□□□ -1.08
RABGGTA-213ENST00000560127 M0R2P5 195 aa8.3□□□□□ -1.08
RABGGTA-213ENST00000560127 PAGE4O60829 102 aa8.3□□□□□ -1.08
RABGGTA-213ENST00000560127 SULT1A2P50226 295 aa8.3□□□□□ -1.08
RABGGTA-213ENST00000560127 DAZ4Q86SG3 579 aaKnown RBP8.3□□□□□ -1.08
RABGGTA-213ENST00000560127 SLC51BQ86UW2 128 aa8.3□□□□□ -1.08
RABGGTA-213ENST00000560127 GTSF1LQ9H1H1 148 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms