RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 CD7P09564 240 aa17.32■□□□□ 0.36
TM2D3-209ENST00000560013 STHQ8IWL8 128 aa17.32■□□□□ 0.36
TM2D3-209ENST00000560013 FAM110AQ9BQ89 295 aa17.32■□□□□ 0.36
TM2D3-209ENST00000560013 SCRT2Q9NQ03 307 aa17.32■□□□□ 0.36
TM2D3-209ENST00000560013 JMJD1CQ15652 2540 aa17.32■□□□□ 0.36
TM2D3-209ENST00000560013 PHLDA3Q9Y5J5 127 aa17.31■□□□□ 0.36
TM2D3-209ENST00000560013 IGHV1OR15-1A0A075B7D0 117 aa17.31■□□□□ 0.36
TM2D3-209ENST00000560013 DMRTA1Q5VZB9 504 aa17.31■□□□□ 0.36
TM2D3-209ENST00000560013 RCHY1Q96PM5 261 aa17.31■□□□□ 0.36
TM2D3-209ENST00000560013 IQCJQ1A5X6 159 aa17.3■□□□□ 0.36
TM2D3-209ENST00000560013 INSL3P51460 131 aa17.29■□□□□ 0.36
TM2D3-209ENST00000560013 KRTAP24-1Q3LI83 254 aa17.29■□□□□ 0.36
TM2D3-209ENST00000560013 MRPL51Q4U2R6 128 aaKnown RBP17.29■□□□□ 0.36
TM2D3-209ENST00000560013 SMIM15Q7Z3B0 74 aa17.29■□□□□ 0.36
TM2D3-209ENST00000560013 RBMY1A1P0DJD3 496 aaKnown RBP17.28■□□□□ 0.36
TM2D3-209ENST00000560013 RBMY1CP0DJD4 496 aa17.28■□□□□ 0.36
TM2D3-209ENST00000560013 RBMY1FQ15415 496 aaKnown RBP17.28■□□□□ 0.36
TM2D3-209ENST00000560013 TRPT1Q86TN4 253 aaKnown RBP17.28■□□□□ 0.36
TM2D3-209ENST00000560013 SAMD10Q9BYL1 202 aa17.28■□□□□ 0.36
TM2D3-209ENST00000560013 M0R381 172 aa17.27■□□□□ 0.36
TM2D3-209ENST00000560013 SPRY2O43597 315 aa17.27■□□□□ 0.36
TM2D3-209ENST00000560013 RAB4AP20338 218 aa17.27■□□□□ 0.36
TM2D3-209ENST00000560013 EVI2AP22794 236 aa17.27■□□□□ 0.36
TM2D3-209ENST00000560013 C9orf66Q5T8R8 295 aa17.27■□□□□ 0.36
TM2D3-209ENST00000560013 Q6ZWC4 215 aa17.27■□□□□ 0.36
TM2D3-209ENST00000560013 Q8N1Y9 231 aa17.27■□□□□ 0.36
TM2D3-209ENST00000560013 RNF185Q96GF1 192 aa17.27■□□□□ 0.36
TM2D3-209ENST00000560013 C19orf73Q9NVV2 129 aa17.27■□□□□ 0.35
TM2D3-209ENST00000560013 U3KQK5 164 aa17.27■□□□□ 0.35
TM2D3-209ENST00000560013 IGHV3-16A0A0C4DH30 117 aa17.26■□□□□ 0.35
TM2D3-209ENST00000560013 D6R8Y8 96 aa17.26■□□□□ 0.35
TM2D3-209ENST00000560013 ORMDL3Q8N138 153 aa17.26■□□□□ 0.35
TM2D3-209ENST00000560013 SPATA3Q8NHX4 192 aa17.26■□□□□ 0.35
TM2D3-209ENST00000560013 MUC4Q99102 2169 aa17.26■□□□□ 0.35
TM2D3-209ENST00000560013 TEP1Q99973 2627 aaKnown RBP17.25■□□□□ 0.35
TM2D3-209ENST00000560013 C20orf144Q9BQM9 153 aa17.24■□□□□ 0.35
TM2D3-209ENST00000560013 MDFICQ9P1T7 246 aa17.24■□□□□ 0.35
TM2D3-209ENST00000560013 TENM1Q9UKZ4 2725 aa17.24■□□□□ 0.35
TM2D3-209ENST00000560013 CKS2P33552 79 aa17.24■□□□□ 0.35
TM2D3-209ENST00000560013 NUTF2P61970 127 aaKnown RBP17.24■□□□□ 0.35
TM2D3-209ENST00000560013 C9orf85Q96MD7 179 aa17.24■□□□□ 0.35
TM2D3-209ENST00000560013 TRGV11A0A075B6L2 103 aa17.23■□□□□ 0.35
TM2D3-209ENST00000560013 NXPH4O95158 308 aa17.23■□□□□ 0.35
TM2D3-209ENST00000560013 INSP01308 110 aa17.23■□□□□ 0.35
TM2D3-209ENST00000560013 AMTP48728 403 aa17.23■□□□□ 0.35
TM2D3-209ENST00000560013 PRELID3AQ96N28 172 aa17.23■□□□□ 0.35
TM2D3-209ENST00000560013 ATRQ13535 2644 aa17.23■□□□□ 0.35
TM2D3-209ENST00000560013 CBY3A6NI87 242 aa17.22■□□□□ 0.35
TM2D3-209ENST00000560013 PKIAP61925 76 aa17.22■□□□□ 0.35
TM2D3-209ENST00000560013 NIT1Q86X76 327 aa17.22■□□□□ 0.35
TM2D3-209ENST00000560013 WFDC10AQ9H1F0 79 aa17.22■□□□□ 0.35
TM2D3-209ENST00000560013 PPBPP02775 128 aa17.22■□□□□ 0.35
TM2D3-209ENST00000560013 SCGB1D1O95968 90 aa17.21■□□□□ 0.35
TM2D3-209ENST00000560013 PMCHP20382 165 aa17.21■□□□□ 0.35
TM2D3-209ENST00000560013 XCL2Q9UBD3 114 aa17.21■□□□□ 0.35
TM2D3-209ENST00000560013 RNASEKQ6P5S7 137 aaKnown RBP17.2■□□□□ 0.34
TM2D3-209ENST00000560013 PRIMA1Q86XR5 153 aa17.2■□□□□ 0.34
TM2D3-209ENST00000560013 URB1-AS1Q96HZ7 61 aa17.2■□□□□ 0.34
TM2D3-209ENST00000560013 SMKR1H3BMG3 65 aa17.2■□□□□ 0.34
TM2D3-209ENST00000560013 HTN1P15515 57 aa17.2■□□□□ 0.34
TM2D3-209ENST00000560013 MCRIP2Q9BUT9 160 aaKnown RBP17.2■□□□□ 0.34
TM2D3-209ENST00000560013 ZNF747Q9BV97 191 aa17.2■□□□□ 0.34
TM2D3-209ENST00000560013 WFDC9Q8NEX5 89 aa17.19■□□□□ 0.34
TM2D3-209ENST00000560013 AP1S3Q96PC3 154 aa17.19■□□□□ 0.34
TM2D3-209ENST00000560013 LINC01587Q99440 93 aa17.19■□□□□ 0.34
TM2D3-209ENST00000560013 LINC00467Q9BRT7 94 aa17.19■□□□□ 0.34
TM2D3-209ENST00000560013 DPH3P1Q9H4G8 78 aa17.19■□□□□ 0.34
TM2D3-209ENST00000560013 TSTD3H0UI37 97 aa17.18■□□□□ 0.34
TM2D3-209ENST00000560013 HSBP1O75506 76 aa17.18■□□□□ 0.34
TM2D3-209ENST00000560013 NCR2O95944 276 aa17.18■□□□□ 0.34
TM2D3-209ENST00000560013 LINC00614P0C842 121 aa17.18■□□□□ 0.34
TM2D3-209ENST00000560013 CHCHD1Q96BP2 118 aaKnown RBP17.18■□□□□ 0.34
TM2D3-209ENST00000560013 ZNF664Q8N3J9 261 aa17.18■□□□□ 0.34
TM2D3-209ENST00000560013 C14orf178Q8N769 122 aaPredicted RBP17.18■□□□□ 0.34
TM2D3-209ENST00000560013 LAMTOR2Q9Y2Q5 125 aa17.18■□□□□ 0.34
TM2D3-209ENST00000560013 PRO1933Q9H354 126 aa17.17■□□□□ 0.34
TM2D3-209ENST00000560013 NPYP01303 97 aa17.16■□□□□ 0.34
TM2D3-209ENST00000560013 GTSCR1Q86UQ5 136 aa17.16■□□□□ 0.34
TM2D3-209ENST00000560013 FAM19A2Q8N3H0 131 aa17.16■□□□□ 0.34
TM2D3-209ENST00000560013 SYT8Q8NBV8 401 aa17.16■□□□□ 0.34
TM2D3-209ENST00000560013 GAS8-AS1O95177 125 aa17.16■□□□□ 0.34
TM2D3-209ENST00000560013 PRSS3P2Q8NHM4 247 aa17.16■□□□□ 0.34
TM2D3-209ENST00000560013 C3orf56Q8N813 242 aa17.15■□□□□ 0.34
TM2D3-209ENST00000560013 PRM2P04554 102 aa17.14■□□□□ 0.33
TM2D3-209ENST00000560013 RPL35AP18077 110 aaKnown RBP17.14■□□□□ 0.33
TM2D3-209ENST00000560013 C1orf158Q8N1D5 194 aa17.14■□□□□ 0.33
TM2D3-209ENST00000560013 DEFB125Q8N687 156 aa17.14■□□□□ 0.33
TM2D3-209ENST00000560013 MRAP2Q96G30 205 aa17.14■□□□□ 0.33
TM2D3-209ENST00000560013 TMEM208Q9BTX3 173 aa17.14■□□□□ 0.33
TM2D3-209ENST00000560013 LOC389332A0A1B0GUA5 103 aa17.14■□□□□ 0.33
TM2D3-209ENST00000560013 TNFRSF6BO95407 300 aa17.14■□□□□ 0.33
TM2D3-209ENST00000560013 DEFA6Q01524 100 aa17.14■□□□□ 0.33
TM2D3-209ENST00000560013 KIF25-AS1Q9Y6Z4 181 aa17.14■□□□□ 0.33
TM2D3-209ENST00000560013 TRAV26-2A0A0B4J265 109 aa17.13■□□□□ 0.33
TM2D3-209ENST00000560013 SMIM17P0DL12 118 aa17.13■□□□□ 0.33
TM2D3-209ENST00000560013 GATA1P15976 413 aaPredicted RBP17.13■□□□□ 0.33
TM2D3-209ENST00000560013 IFI27P40305 119 aaPredicted RBP17.13■□□□□ 0.33
TM2D3-209ENST00000560013 VWFP04275 2813 aa17.13■□□□□ 0.33
TM2D3-209ENST00000560013 GIG44P09565 113 aaPredicted RBP17.12■□□□□ 0.33
TM2D3-209ENST00000560013 DDTP30046 118 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms