RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 V9GYV3 84 aa3.76□□□□□ -1.81
SPG11-220ENST00000559933 RYR3Q15413 4870 aa3.76□□□□□ -1.81
SPG11-220ENST00000559933 TRGV11A0A075B6L2 103 aa3.75□□□□□ -1.81
SPG11-220ENST00000559933 IGHV1OR15-1A0A075B7D0 117 aa3.75□□□□□ -1.81
SPG11-220ENST00000559933 PLAC8L1A1L4L8 177 aa3.75□□□□□ -1.81
SPG11-220ENST00000559933 C7orf77A4D0Y5 90 aa3.75□□□□□ -1.81
SPG11-220ENST00000559933 TMEM189A5PLL7 270 aa3.75□□□□□ -1.81
SPG11-220ENST00000559933 FBLL1A6NHQ2 334 aaKnown RBP3.75□□□□□ -1.81
SPG11-220ENST00000559933 CBY3A6NI87 242 aa3.75□□□□□ -1.81
SPG11-220ENST00000559933 H3BVH4 76 aa3.75□□□□□ -1.81
SPG11-220ENST00000559933 SPINK4O60575 86 aa3.75□□□□□ -1.81
SPG11-220ENST00000559933 EMP1P54849 157 aa3.75□□□□□ -1.81
SPG11-220ENST00000559933 APOC4P55056 127 aa3.75□□□□□ -1.81
SPG11-220ENST00000559933 FAM3BP58499 235 aaPredicted RBP3.75□□□□□ -1.81
SPG11-220ENST00000559933 FAM231DQ6ZW35 169 aa3.75□□□□□ -1.81
SPG11-220ENST00000559933 OR10G8Q8NGN5 311 aa3.75□□□□□ -1.81
SPG11-220ENST00000559933 GTSF1Q8WW33 167 aa3.75□□□□□ -1.81
SPG11-220ENST00000559933 DAZAP1Q96EP5 407 aaKnown RBP3.75□□□□□ -1.81
SPG11-220ENST00000559933 LINC01587Q99440 93 aa3.75□□□□□ -1.81
SPG11-220ENST00000559933 OVOL2Q9BRP0 275 aa3.75□□□□□ -1.81
SPG11-220ENST00000559933 TMEM208Q9BTX3 173 aa3.75□□□□□ -1.81
SPG11-220ENST00000559933 LENEPQ9Y5L5 61 aa3.75□□□□□ -1.81
SPG11-220ENST00000559933 LY96Q9Y6Y9 160 aa3.75□□□□□ -1.81
SPG11-220ENST00000559933 TGIF2-C20orf24A0A0A6YYL0 155 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 IGHV3-16A0A0C4DH30 117 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 IGHV4-28A0A0C4DH34 117 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 TRBV7-9A0A0J9YWB2 115 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 FABP5P3A8MUU1 101 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 A8MZ25 164 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 H7BYZ3 331 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 AMBPP02760 352 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 ARMS2P0C7Q2 107 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 RNASE3P12724 160 aaKnown RBP3.74□□□□□ -1.81
SPG11-220ENST00000559933 FOXA3P55318 350 aaPredicted RBP3.74□□□□□ -1.81
SPG11-220ENST00000559933 NUTF2P61970 127 aaKnown RBP3.74□□□□□ -1.81
SPG11-220ENST00000559933 COL7A1Q02388 2944 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 MORN3Q6PF18 240 aaPredicted RBP3.74□□□□□ -1.81
SPG11-220ENST00000559933 FAM159AQ6UWV7 190 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 ZNF705AQ6ZN79 300 aaPredicted RBP3.74□□□□□ -1.81
SPG11-220ENST00000559933 SVBPQ8N300 66 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 C11orf72Q8NBR9 251 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 OR11H2Q8NH07 326 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 OR10AG1Q8NH19 301 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 RNF183Q96D59 192 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 SMIM12Q96EX1 92 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 PGLYRP4Q96LB8 373 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 RCHY1Q96PM5 261 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 JPT2Q9H910 190 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 GSN-AS1Q9NRJ2 163 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 OSTCQ9NRP0 149 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 MRPL16Q9NX20 251 aaKnown RBP3.74□□□□□ -1.81
SPG11-220ENST00000559933 MSRB1Q9NZV6 116 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 CELA1Q9UNI1 258 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 GOLT1BQ9Y3E0 138 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 BIRC6Q9NR09 4857 aa3.74□□□□□ -1.81
SPG11-220ENST00000559933 TGP01266 2768 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 KIR2DL5BA0A0G2JN68 375 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 KIR2DL5BA0A0G2JPC4 375 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 A0A1W2PPQ1 181 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 HIGD1CA8MV81 97 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 M0R381 172 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 SNAPINO95295 136 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 MT-ND4LP03901 98 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 CXCL1P09341 107 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 S100A4P26447 101 aaKnown RBP3.73□□□□□ -1.81
SPG11-220ENST00000559933 ASIPP42127 132 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 PNRC1Q12796 327 aaPredicted RBP3.73□□□□□ -1.81
SPG11-220ENST00000559933 RHEBQ15382 184 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 MRPL54Q6P161 138 aaKnown RBP3.73□□□□□ -1.81
SPG11-220ENST00000559933 LYZL1Q6UWQ5 148 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 KIR2DL5AQ8N109 375 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 C15orf54Q8N8G6 183 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 FER1L6-AS1Q8NA97 138 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 Q8NAQ8 132 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 KIR2DL5BQ8NHK3 375 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 RNASE8Q8TDE3 154 aaKnown RBP3.73□□□□□ -1.81
SPG11-220ENST00000559933 TSKUQ8WUA8 353 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 IL36BQ9NZH7 164 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 ZMAT5Q9UDW3 170 aaKnown RBP3.73□□□□□ -1.81
SPG11-220ENST00000559933 MUC4Q99102 2169 aa3.73□□□□□ -1.81
SPG11-220ENST00000559933 A0A0J9YWU9 116 aa3.72□□□□□ -1.81
SPG11-220ENST00000559933 SMIM27A0A1W2PRY6 76 aa3.72□□□□□ -1.81
SPG11-220ENST00000559933 IGHV3-53P01767 116 aa3.72□□□□□ -1.81
SPG11-220ENST00000559933 IGLC6P0CF74 106 aa3.72□□□□□ -1.81
SPG11-220ENST00000559933 ZNF415Q09FC8 603 aa3.72□□□□□ -1.81
SPG11-220ENST00000559933 RRN3P1Q2M238 152 aa3.72□□□□□ -1.81
SPG11-220ENST00000559933 TDRG1Q3Y452 100 aa3.72□□□□□ -1.81
SPG11-220ENST00000559933 Q6ZTI0 123 aa3.72□□□□□ -1.81
SPG11-220ENST00000559933 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.72□□□□□ -1.81
SPG11-220ENST00000559933 NUP35Q8NFH5 326 aa3.72□□□□□ -1.81
SPG11-220ENST00000559933 C9orf85Q96MD7 179 aa3.72□□□□□ -1.81
SPG11-220ENST00000559933 YPEL4Q96NS1 127 aa3.72□□□□□ -1.81
SPG11-220ENST00000559933 TM2D3Q9BRN9 247 aa3.72□□□□□ -1.81
SPG11-220ENST00000559933 PYGO2Q9BRQ0 406 aa3.72□□□□□ -1.81
SPG11-220ENST00000559933 C1QTNF4Q9BXJ3 329 aa3.72□□□□□ -1.81
SPG11-220ENST00000559933 SAMD10Q9BYL1 202 aa3.72□□□□□ -1.81
SPG11-220ENST00000559933 NOP10Q9NPE3 64 aaKnown RBP3.72□□□□□ -1.81
SPG11-220ENST00000559933 BIN3Q9NQY0 253 aa3.72□□□□□ -1.81
SPG11-220ENST00000559933 TNFRSF18Q9Y5U5 241 aa3.72□□□□□ -1.81
SPG11-220ENST00000559933 A0A087WWC5 75 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms