RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 LINC01619G3V211 115 aa11.87□□□□□ -0.51
USP8-208ENST00000559329 LGALS9BQ3B8N2 356 aa11.87□□□□□ -0.51
USP8-208ENST00000559329 LGALS9CQ6DKI2 356 aa11.87□□□□□ -0.51
USP8-208ENST00000559329 MRPS16Q9Y3D3 137 aaKnown RBP11.87□□□□□ -0.51
USP8-208ENST00000559329 NUTF2P61970 127 aaKnown RBP11.86□□□□□ -0.51
USP8-208ENST00000559329 IFI27L1Q96BM0 104 aa11.86□□□□□ -0.51
USP8-208ENST00000559329 DPH3P1Q9H4G8 78 aa11.86□□□□□ -0.51
USP8-208ENST00000559329 POM121L12Q8N7R1 296 aa11.86□□□□□ -0.51
USP8-208ENST00000559329 CCDC168Q8NDH2 2452 aa11.85□□□□□ -0.51
USP8-208ENST00000559329 FAM159AQ6UWV7 190 aa11.85□□□□□ -0.51
USP8-208ENST00000559329 FOXI2Q6ZQN5 318 aa11.85□□□□□ -0.51
USP8-208ENST00000559329 OR11H1Q8NG94 326 aa11.85□□□□□ -0.51
USP8-208ENST00000559329 WFDC12Q8WWY7 111 aa11.85□□□□□ -0.51
USP8-208ENST00000559329 TRAV12-3A0A0B4J271 114 aa11.84□□□□□ -0.51
USP8-208ENST00000559329 HSBP1L1C9JCN9 74 aa11.84□□□□□ -0.51
USP8-208ENST00000559329 AMTNQ6UX39 209 aa11.84□□□□□ -0.51
USP8-208ENST00000559329 C14orf178Q8N769 122 aaPredicted RBP11.84□□□□□ -0.51
USP8-208ENST00000559329 FOXC2Q99958 501 aa11.84□□□□□ -0.51
USP8-208ENST00000559329 ESM1Q9NQ30 184 aa11.84□□□□□ -0.51
USP8-208ENST00000559329 KIF25-AS1Q9Y6Z4 181 aa11.84□□□□□ -0.51
USP8-208ENST00000559329 MUC4Q99102 2169 aa11.84□□□□□ -0.51
USP8-208ENST00000559329 TRAV2A0A0B4J234 112 aa11.84□□□□□ -0.51
USP8-208ENST00000559329 DUSP14O95147 198 aaKnown RBP11.84□□□□□ -0.51
USP8-208ENST00000559329 OR9G4Q8NGQ1 327 aa11.84□□□□□ -0.51
USP8-208ENST00000559329 OR1N2Q8NGR9 330 aa11.84□□□□□ -0.51
USP8-208ENST00000559329 RASL10AQ92737 203 aa11.84□□□□□ -0.51
USP8-208ENST00000559329 AP1S3Q96PC3 154 aa11.84□□□□□ -0.51
USP8-208ENST00000559329 GOLT1BQ9Y3E0 138 aa11.84□□□□□ -0.51
USP8-208ENST00000559329 HELZ2Q9BYK8 2649 aaKnown RBP11.83□□□□□ -0.52
USP8-208ENST00000559329 CD5LO43866 347 aa11.83□□□□□ -0.52
USP8-208ENST00000559329 CDKN1BP46527 198 aa11.83□□□□□ -0.52
USP8-208ENST00000559329 SONP18583 2426 aaKnown RBP11.83□□□□□ -0.52
USP8-208ENST00000559329 A8MTW9 85 aa11.82□□□□□ -0.52
USP8-208ENST00000559329 LINC00315P59091 139 aa11.82□□□□□ -0.52
USP8-208ENST00000559329 TMEM158Q8WZ71 300 aa11.82□□□□□ -0.52
USP8-208ENST00000559329 DPF1Q92782 380 aa11.82□□□□□ -0.52
USP8-208ENST00000559329 C9orf85Q96MD7 179 aa11.82□□□□□ -0.52
USP8-208ENST00000559329 SMIM2Q9BVW6 85 aa11.82□□□□□ -0.52
USP8-208ENST00000559329 PEMTQ9UBM1 199 aa11.82□□□□□ -0.52
USP8-208ENST00000559329 TRAV12-2A0A075B6T6 113 aa11.82□□□□□ -0.52
USP8-208ENST00000559329 IGHV3-16A0A0C4DH30 117 aa11.82□□□□□ -0.52
USP8-208ENST00000559329 IGKV3-20P01619 116 aa11.82□□□□□ -0.52
USP8-208ENST00000559329 LAGE3Q14657 143 aa11.82□□□□□ -0.52
USP8-208ENST00000559329 KLHL30-AS1Q8NEE0 82 aa11.82□□□□□ -0.52
USP8-208ENST00000559329 DUX3Q96PT4 197 aa11.82□□□□□ -0.52
USP8-208ENST00000559329 C20orf78Q9BR46 151 aa11.82□□□□□ -0.52
USP8-208ENST00000559329 TP73-AS1Q9UF72 201 aa11.82□□□□□ -0.52
USP8-208ENST00000559329 CD7P09564 240 aa11.81□□□□□ -0.52
USP8-208ENST00000559329 DLX4Q92988 240 aaPredicted RBP11.81□□□□□ -0.52
USP8-208ENST00000559329 SUMO2P61956 95 aaKnown RBP11.8□□□□□ -0.52
USP8-208ENST00000559329 SPINK13Q1W4C9 94 aa11.8□□□□□ -0.52
USP8-208ENST00000559329 C18orf15Q96N68 181 aa11.8□□□□□ -0.52
USP8-208ENST00000559329 UNC79Q9P2D8 2635 aa11.8□□□□□ -0.52
USP8-208ENST00000559329 TCAPO15273 167 aa11.8□□□□□ -0.52
USP8-208ENST00000559329 KHDC1LQ5JSQ8 128 aa11.8□□□□□ -0.52
USP8-208ENST00000559329 SLC25A34Q6PIV7 304 aa11.8□□□□□ -0.52
USP8-208ENST00000559329 TMEM61Q8N0U2 210 aa11.8□□□□□ -0.52
USP8-208ENST00000559329 RPL39LQ96EH5 51 aaKnown RBP11.8□□□□□ -0.52
USP8-208ENST00000559329 ANK3Q12955 4377 aaKnown RBP11.8□□□□□ -0.52
USP8-208ENST00000559329 ITPR2Q14571 2701 aa11.79□□□□□ -0.52
USP8-208ENST00000559329 AGRNO00468 2067 aa11.79□□□□□ -0.52
USP8-208ENST00000559329 IGHV1OR15-1A0A075B7D0 117 aa11.79□□□□□ -0.52
USP8-208ENST00000559329 SMIM17P0DL12 118 aa11.79□□□□□ -0.52
USP8-208ENST00000559329 BATFQ16520 125 aa11.79□□□□□ -0.52
USP8-208ENST00000559329 MGPP08493 103 aa11.78□□□□□ -0.52
USP8-208ENST00000559329 COX8AP10176 69 aa11.78□□□□□ -0.52
USP8-208ENST00000559329 HLA-DRB4P13762 266 aa11.78□□□□□ -0.52
USP8-208ENST00000559329 ODF1Q14990 250 aa11.78□□□□□ -0.52
USP8-208ENST00000559329 ANKRD39Q53RE8 183 aa11.78□□□□□ -0.52
USP8-208ENST00000559329 HIST2H2BDQ6DRA6 164 aa11.78□□□□□ -0.52
USP8-208ENST00000559329 Q8N1Y9 231 aa11.78□□□□□ -0.52
USP8-208ENST00000559329 LINC00469Q8N7U9 141 aa11.78□□□□□ -0.52
USP8-208ENST00000559329 ZMAT4Q9H898 229 aa11.78□□□□□ -0.52
USP8-208ENST00000559329 ZMAT5Q9UDW3 170 aaKnown RBP11.78□□□□□ -0.52
USP8-208ENST00000559329 HLA-DRB4X5D2U9 266 aa11.78□□□□□ -0.52
USP8-208ENST00000559329 K7EMI3 77 aa11.78□□□□□ -0.52
USP8-208ENST00000559329 FHL3Q13643 280 aa11.78□□□□□ -0.52
USP8-208ENST00000559329 COL5A1-AS1Q5SY13 56 aa11.78□□□□□ -0.52
USP8-208ENST00000559329 STPG4Q8N801 248 aa11.78□□□□□ -0.52
USP8-208ENST00000559329 YAE1D1Q9NRH1 226 aa11.78□□□□□ -0.52
USP8-208ENST00000559329 MDFICQ9P1T7 246 aa11.78□□□□□ -0.52
USP8-208ENST00000559329 DKK2Q9UBU2 259 aa11.78□□□□□ -0.52
USP8-208ENST00000559329 KNCNA6PVL3 124 aa11.77□□□□□ -0.53
USP8-208ENST00000559329 ATP5LO75964 103 aa11.77□□□□□ -0.53
USP8-208ENST00000559329 PPP1R17O96001 155 aa11.77□□□□□ -0.53
USP8-208ENST00000559329 DEFB131AP59861 70 aa11.77□□□□□ -0.53
USP8-208ENST00000559329 DEFB114Q30KQ6 69 aa11.77□□□□□ -0.53
USP8-208ENST00000559329 RAX2Q96IS3 184 aa11.77□□□□□ -0.53
USP8-208ENST00000559329 JPT2Q9H910 190 aa11.77□□□□□ -0.53
USP8-208ENST00000559329 H3BMM0 161 aa11.76□□□□□ -0.53
USP8-208ENST00000559329 RBMY1BA6NDE4 496 aaKnown RBP11.76□□□□□ -0.53
USP8-208ENST00000559329 RBMY1EA6NEQ0 496 aaKnown RBP11.76□□□□□ -0.53
USP8-208ENST00000559329 RNASE1P07998 156 aaKnown RBP11.76□□□□□ -0.53
USP8-208ENST00000559329 RBMY1DP0C7P1 496 aaKnown RBP11.76□□□□□ -0.53
USP8-208ENST00000559329 RBMY1A1P0DJD3 496 aaKnown RBP11.76□□□□□ -0.53
USP8-208ENST00000559329 RBMY1CP0DJD4 496 aa11.76□□□□□ -0.53
USP8-208ENST00000559329 FGF6P10767 208 aa11.76□□□□□ -0.53
USP8-208ENST00000559329 RPL32P62910 135 aaKnown RBP11.76□□□□□ -0.53
USP8-208ENST00000559329 RBMY1FQ15415 496 aaKnown RBP11.76□□□□□ -0.53
USP8-208ENST00000559329 ORMDL2Q53FV1 153 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms