RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 TRAV2A0A0B4J234 112 aa8.45□□□□□ -1.06
CLPX-204ENST00000559152 ATP5LO75964 103 aa8.45□□□□□ -1.06
CLPX-204ENST00000559152 NXPH4O95158 308 aa8.45□□□□□ -1.06
CLPX-204ENST00000559152 GAS8-AS1O95177 125 aa8.45□□□□□ -1.06
CLPX-204ENST00000559152 BATFQ16520 125 aa8.45□□□□□ -1.06
CLPX-204ENST00000559152 FOXI2Q6ZQN5 318 aa8.45□□□□□ -1.06
CLPX-204ENST00000559152 LINC00469Q8N7U9 141 aa8.45□□□□□ -1.06
CLPX-204ENST00000559152 WFDC12Q8WWY7 111 aa8.45□□□□□ -1.06
CLPX-204ENST00000559152 ZNF469Q96JG9 3925 aaPredicted RBP8.45□□□□□ -1.06
CLPX-204ENST00000559152 GNRH2O43555 120 aa8.44□□□□□ -1.06
CLPX-204ENST00000559152 RNASE3P12724 160 aaKnown RBP8.44□□□□□ -1.06
CLPX-204ENST00000559152 GATA1P15976 413 aaPredicted RBP8.44□□□□□ -1.06
CLPX-204ENST00000559152 TCTEX1D4Q5JR98 221 aa8.44□□□□□ -1.06
CLPX-204ENST00000559152 PDZD2O15018 2839 aa8.44□□□□□ -1.06
CLPX-204ENST00000559152 SETXQ7Z333 2677 aaKnown RBP8.44□□□□□ -1.06
CLPX-204ENST00000559152 BAHCC1Q9P281 2608 aa8.44□□□□□ -1.06
CLPX-204ENST00000559152 SMIM17P0DL12 118 aa8.44□□□□□ -1.06
CLPX-204ENST00000559152 CDKN1BP46527 198 aa8.44□□□□□ -1.06
CLPX-204ENST00000559152 WFDC11Q8NEX6 87 aa8.44□□□□□ -1.06
CLPX-204ENST00000559152 MCRIP2Q9BUT9 160 aaKnown RBP8.44□□□□□ -1.06
CLPX-204ENST00000559152 SELENOKQ9Y6D0 94 aa8.44□□□□□ -1.06
CLPX-204ENST00000559152 TRAV26-2A0A0B4J265 109 aa8.43□□□□□ -1.06
CLPX-204ENST00000559152 KIR3DS1Q14943 382 aa8.43□□□□□ -1.06
CLPX-204ENST00000559152 ORMDL2Q53FV1 153 aa8.43□□□□□ -1.06
CLPX-204ENST00000559152 C14orf178Q8N769 122 aaPredicted RBP8.43□□□□□ -1.06
CLPX-204ENST00000559152 TMEM158Q8WZ71 300 aa8.43□□□□□ -1.06
CLPX-204ENST00000559152 TRAV12-3A0A0B4J271 114 aa8.42□□□□□ -1.06
CLPX-204ENST00000559152 TCAPO15273 167 aa8.42□□□□□ -1.06
CLPX-204ENST00000559152 FXYD7P58549 80 aa8.42□□□□□ -1.06
CLPX-204ENST00000559152 SUMO2P61956 95 aaKnown RBP8.42□□□□□ -1.06
CLPX-204ENST00000559152 POM121L12Q8N7R1 296 aa8.42□□□□□ -1.06
CLPX-204ENST00000559152 OR11H1Q8NG94 326 aa8.42□□□□□ -1.06
CLPX-204ENST00000559152 DUX5Q96PT3 197 aa8.42□□□□□ -1.06
CLPX-204ENST00000559152 SMIM2Q9BVW6 85 aa8.42□□□□□ -1.06
CLPX-204ENST00000559152 ITPR3Q14573 2671 aa8.42□□□□□ -1.06
CLPX-204ENST00000559152 CD5LO43866 347 aa8.42□□□□□ -1.06
CLPX-204ENST00000559152 CD7P09564 240 aa8.42□□□□□ -1.06
CLPX-204ENST00000559152 COX8AP10176 69 aa8.42□□□□□ -1.06
CLPX-204ENST00000559152 SCGB2A2Q13296 93 aa8.42□□□□□ -1.06
CLPX-204ENST00000559152 SYT8Q8NBV8 401 aa8.42□□□□□ -1.06
CLPX-204ENST00000559152 OR9G4Q8NGQ1 327 aa8.42□□□□□ -1.06
CLPX-204ENST00000559152 PRSS1P07477 247 aa8.41□□□□□ -1.06
CLPX-204ENST00000559152 MGPP08493 103 aa8.41□□□□□ -1.06
CLPX-204ENST00000559152 G0S2P27469 103 aa8.41□□□□□ -1.06
CLPX-204ENST00000559152 SLURP1P55000 103 aa8.41□□□□□ -1.06
CLPX-204ENST00000559152 C18orf15Q96N68 181 aa8.41□□□□□ -1.06
CLPX-204ENST00000559152 NUDT3O95989 172 aa8.41□□□□□ -1.06
CLPX-204ENST00000559152 C12orf54Q6X4T0 127 aa8.41□□□□□ -1.06
CLPX-204ENST00000559152 FLNAP21333 2647 aaKnown RBP8.41□□□□□ -1.06
CLPX-204ENST00000559152 IGHV1OR15-1A0A075B7D0 117 aa8.4□□□□□ -1.06
CLPX-204ENST00000559152 KHDC1LQ5JSQ8 128 aa8.4□□□□□ -1.06
CLPX-204ENST00000559152 Q6ZSV7 163 aa8.4□□□□□ -1.06
CLPX-204ENST00000559152 RASL10AQ92737 203 aa8.4□□□□□ -1.06
CLPX-204ENST00000559152 FOXC2Q99958 501 aa8.4□□□□□ -1.06
CLPX-204ENST00000559152 DNAJC9-AS1A6NH13 148 aa8.39□□□□□ -1.07
CLPX-204ENST00000559152 LINC01549A6NIU2 74 aa8.39□□□□□ -1.07
CLPX-204ENST00000559152 RPL32P62910 135 aaKnown RBP8.39□□□□□ -1.07
CLPX-204ENST00000559152 ADAMTSL5Q6ZMM2 481 aa8.39□□□□□ -1.07
CLPX-204ENST00000559152 KLHL30-AS1Q8NEE0 82 aa8.39□□□□□ -1.07
CLPX-204ENST00000559152 C9orf85Q96MD7 179 aa8.39□□□□□ -1.07
CLPX-204ENST00000559152 TLN2Q9Y4G6 2542 aa8.39□□□□□ -1.07
CLPX-204ENST00000559152 TRGV11A0A075B6L2 103 aa8.39□□□□□ -1.07
CLPX-204ENST00000559152 IGHV3-16A0A0C4DH30 117 aa8.39□□□□□ -1.07
CLPX-204ENST00000559152 IGKV3-20P01619 116 aa8.39□□□□□ -1.07
CLPX-204ENST00000559152 HINT1P49773 126 aaPredicted RBP8.39□□□□□ -1.07
CLPX-204ENST00000559152 DEFB136Q30KP8 78 aa8.39□□□□□ -1.07
CLPX-204ENST00000559152 DYNLRB2Q8TF09 96 aa8.39□□□□□ -1.07
CLPX-204ENST00000559152 ZMAT4Q9H898 229 aa8.39□□□□□ -1.07
CLPX-204ENST00000559152 KIF25-AS1Q9Y6Z4 181 aa8.39□□□□□ -1.07
CLPX-204ENST00000559152 MYO9AB2RTY4 2548 aa8.39□□□□□ -1.07
CLPX-204ENST00000559152 CREBBPQ92793 2442 aa8.39□□□□□ -1.07
CLPX-204ENST00000559152 AKAP9Q99996 3911 aa8.39□□□□□ -1.07
CLPX-204ENST00000559152 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.38□□□□□ -1.07
CLPX-204ENST00000559152 ODF1Q14990 250 aa8.38□□□□□ -1.07
CLPX-204ENST00000559152 SPINK13Q1W4C9 94 aa8.38□□□□□ -1.07
CLPX-204ENST00000559152 C18orf65Q6ZTR6 163 aa8.38□□□□□ -1.07
CLPX-204ENST00000559152 STPG4Q8N801 248 aa8.38□□□□□ -1.07
CLPX-204ENST00000559152 TRAV12-2A0A075B6T6 113 aa8.38□□□□□ -1.07
CLPX-204ENST00000559152 DLEU1O43261 78 aa8.38□□□□□ -1.07
CLPX-204ENST00000559152 IGKCP01834 107 aa8.38□□□□□ -1.07
CLPX-204ENST00000559152 HLA-DRB4P13762 266 aa8.38□□□□□ -1.07
CLPX-204ENST00000559152 AMTNQ6UX39 209 aa8.38□□□□□ -1.07
CLPX-204ENST00000559152 TEX15Q9BXT5 2789 aa8.38□□□□□ -1.07
CLPX-204ENST00000559152 HLA-DRB4X5D2U9 266 aa8.38□□□□□ -1.07
CLPX-204ENST00000559152 A8MTW9 85 aa8.37□□□□□ -1.07
CLPX-204ENST00000559152 SIVA1O15304 175 aa8.37□□□□□ -1.07
CLPX-204ENST00000559152 SPRY2O43597 315 aa8.37□□□□□ -1.07
CLPX-204ENST00000559152 DPM2O94777 84 aa8.37□□□□□ -1.07
CLPX-204ENST00000559152 LINC00315P59091 139 aa8.37□□□□□ -1.07
CLPX-204ENST00000559152 Q8N1Y9 231 aa8.37□□□□□ -1.07
CLPX-204ENST00000559152 DKK2Q9UBU2 259 aa8.37□□□□□ -1.07
CLPX-204ENST00000559152 ZNF25P17030 456 aaPredicted RBP8.37□□□□□ -1.07
CLPX-204ENST00000559152 DEFB131AP59861 70 aa8.37□□□□□ -1.07
CLPX-204ENST00000559152 ANKRD39Q53RE8 183 aa8.37□□□□□ -1.07
CLPX-204ENST00000559152 BOD1L2Q8IYS8 172 aa8.37□□□□□ -1.07
CLPX-204ENST00000559152 DLX4Q92988 240 aaPredicted RBP8.37□□□□□ -1.07
CLPX-204ENST00000559152 TOMM6Q96B49 74 aa8.37□□□□□ -1.07
CLPX-204ENST00000559152 RPL39LQ96EH5 51 aaKnown RBP8.37□□□□□ -1.07
CLPX-204ENST00000559152 TRAV12-1A0A0B4J245 112 aa8.36□□□□□ -1.07
CLPX-204ENST00000559152 TRAV25A0A0B4J276 109 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms