RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 HELZ2Q9BYK8 2649 aaKnown RBP0.78□□□□□ -2.29
GABPB1-209ENST00000559100 KIAA1549LQ6ZVL6 1849 aa0.78□□□□□ -2.29
GABPB1-209ENST00000559100 ANK1P16157 1881 aa0.78□□□□□ -2.29
GABPB1-209ENST00000559100 CDK5RAP2Q96SN8 1893 aa0.78□□□□□ -2.29
GABPB1-209ENST00000559100 HELZP42694 1942 aaKnown RBP0.77□□□□□ -2.29
GABPB1-209ENST00000559100 NCOA6Q14686 2063 aaPredicted RBP0.77□□□□□ -2.29
GABPB1-209ENST00000559100 SNRNP200O75643 2136 aaKnown RBP0.77□□□□□ -2.29
GABPB1-209ENST00000559100 TCRBV3S1A0A5B6 114 aa0.77□□□□□ -2.29
GABPB1-209ENST00000559100 PIRTP0C851 137 aa0.77□□□□□ -2.29
GABPB1-209ENST00000559100 PIPP12273 146 aaPredicted RBP0.77□□□□□ -2.29
GABPB1-209ENST00000559100 CAV3P56539 151 aa0.77□□□□□ -2.29
GABPB1-209ENST00000559100 SPANXN1Q5VSR9 72 aa0.77□□□□□ -2.29
GABPB1-209ENST00000559100 RPL13AP3Q6NVV1 102 aa0.77□□□□□ -2.29
GABPB1-209ENST00000559100 Q6ZS92 163 aa0.77□□□□□ -2.29
GABPB1-209ENST00000559100 SPTSSAQ969W0 71 aa0.77□□□□□ -2.29
GABPB1-209ENST00000559100 LINC00470Q9BZP3 86 aa0.77□□□□□ -2.29
GABPB1-209ENST00000559100 PTPRGP23470 1445 aa0.77□□□□□ -2.29
GABPB1-209ENST00000559100 PEAK1Q9H792 1746 aa0.77□□□□□ -2.29
GABPB1-209ENST00000559100 PTPRDP23468 1912 aa0.77□□□□□ -2.29
GABPB1-209ENST00000559100 FANCMQ8IYD8 2048 aa0.76□□□□□ -2.29
GABPB1-209ENST00000559100 TRPM7Q96QT4 1865 aa0.76□□□□□ -2.29
GABPB1-209ENST00000559100 LRP5O75197 1615 aa0.76□□□□□ -2.29
GABPB1-209ENST00000559100 PHRF1Q9P1Y6 1649 aaKnown RBP0.76□□□□□ -2.29
GABPB1-209ENST00000559100 A0A1W2PPM0 123 aa0.76□□□□□ -2.29
GABPB1-209ENST00000559100 CCDC179H3BU77 68 aa0.76□□□□□ -2.29
GABPB1-209ENST00000559100 K7EP13 123 aa0.76□□□□□ -2.29
GABPB1-209ENST00000559100 EMX2Q04743 252 aa0.76□□□□□ -2.29
GABPB1-209ENST00000559100 FXYD3Q14802 87 aa0.76□□□□□ -2.29
GABPB1-209ENST00000559100 ZNF56Q15929 161 aa0.76□□□□□ -2.29
GABPB1-209ENST00000559100 LINC01545Q5VT33 79 aa0.76□□□□□ -2.29
GABPB1-209ENST00000559100 OR2T2Q6IF00 324 aa0.76□□□□□ -2.29
GABPB1-209ENST00000559100 CYP2G1PQ6ZSU1 146 aa0.76□□□□□ -2.29
GABPB1-209ENST00000559100 COPS9Q8WXC6 57 aa0.76□□□□□ -2.29
GABPB1-209ENST00000559100 TMEM242Q9NWH2 141 aa0.76□□□□□ -2.29
GABPB1-209ENST00000559100 NDUFA12Q9UI09 145 aa0.76□□□□□ -2.29
GABPB1-209ENST00000559100 MUC6Q6W4X9 2439 aa0.76□□□□□ -2.29
GABPB1-209ENST00000559100 KIDINS220Q9ULH0 1771 aa0.75□□□□□ -2.29
GABPB1-209ENST00000559100 BICRAQ9NZM4 1560 aa0.75□□□□□ -2.29
GABPB1-209ENST00000559100 CDK12Q9NYV4 1490 aaPredicted RBP0.75□□□□□ -2.29
GABPB1-209ENST00000559100 MEIG1Q5JSS6 88 aa0.75□□□□□ -2.29
GABPB1-209ENST00000559100 S100A7L2Q5SY68 101 aa0.75□□□□□ -2.29
GABPB1-209ENST00000559100 TET1Q8NFU7 2136 aa0.75□□□□□ -2.29
GABPB1-209ENST00000559100 PPP1R1CQ8WVI7 109 aa0.75□□□□□ -2.29
GABPB1-209ENST00000559100 C1orf54Q8WWF1 131 aa0.75□□□□□ -2.29
GABPB1-209ENST00000559100 IFI27L1Q96BM0 104 aa0.75□□□□□ -2.29
GABPB1-209ENST00000559100 TMEM141Q96I45 108 aa0.75□□□□□ -2.29
GABPB1-209ENST00000559100 LINC00208Q96KT6 92 aa0.75□□□□□ -2.29
GABPB1-209ENST00000559100 SDF2Q99470 211 aa0.75□□□□□ -2.29
GABPB1-209ENST00000559100 SEC11CQ9BY50 192 aa0.75□□□□□ -2.29
GABPB1-209ENST00000559100 RPRMQ9NS64 109 aa0.75□□□□□ -2.29
GABPB1-209ENST00000559100 COA4Q9NYJ1 87 aa0.75□□□□□ -2.29
GABPB1-209ENST00000559100 DLG5Q8TDM6 1919 aa0.75□□□□□ -2.29
GABPB1-209ENST00000559100 MED12Q93074 2177 aa0.74□□□□□ -2.29
GABPB1-209ENST00000559100 TRAV12-2A0A075B6T6 113 aa0.74□□□□□ -2.29
GABPB1-209ENST00000559100 TEX49A0A1B0GTD5 131 aa0.74□□□□□ -2.29
GABPB1-209ENST00000559100 CXorf51AA0A1B0GTR3 108 aa0.74□□□□□ -2.29
GABPB1-209ENST00000559100 HIST1H1DP16402 221 aaKnown RBP0.74□□□□□ -2.29
GABPB1-209ENST00000559100 KRTAP10-4P60372 401 aaPredicted RBP0.74□□□□□ -2.29
GABPB1-209ENST00000559100 UBE2G1P62253 170 aa0.74□□□□□ -2.29
GABPB1-209ENST00000559100 SLC48A1Q6P1K1 146 aa0.74□□□□□ -2.29
GABPB1-209ENST00000559100 NDUFA11Q86Y39 141 aa0.74□□□□□ -2.29
GABPB1-209ENST00000559100 Q8N6K4 173 aa0.74□□□□□ -2.29
GABPB1-209ENST00000559100 C5orf56Q8N8D9 126 aa0.74□□□□□ -2.29
GABPB1-209ENST00000559100 SPTSSBQ8NFR3 76 aa0.74□□□□□ -2.29
GABPB1-209ENST00000559100 TSKUQ8WUA8 353 aa0.74□□□□□ -2.29
GABPB1-209ENST00000559100 KMT2BQ9UMN6 2715 aaPredicted RBP0.74□□□□□ -2.29
GABPB1-209ENST00000559100 NINQ8N4C6 2090 aa0.74□□□□□ -2.29
GABPB1-209ENST00000559100 COL6A6A6NMZ7 2263 aa0.73□□□□□ -2.29
GABPB1-209ENST00000559100 NAIPQ13075 1403 aa0.73□□□□□ -2.29
GABPB1-209ENST00000559100 ROCK2O75116 1388 aaKnown RBP0.73□□□□□ -2.29
GABPB1-209ENST00000559100 ZGRF1Q86YA3 2104 aa0.73□□□□□ -2.29
GABPB1-209ENST00000559100 FLG2Q5D862 2391 aaPredicted RBP0.73□□□□□ -2.29
GABPB1-209ENST00000559100 TRAV12-3A0A0B4J271 114 aa0.73□□□□□ -2.29
GABPB1-209ENST00000559100 PIGBOS1A0A0B4J2F0 54 aa0.73□□□□□ -2.29
GABPB1-209ENST00000559100 NBDYA0A0U1RRE5 68 aa0.73□□□□□ -2.29
GABPB1-209ENST00000559100 PITX3O75364 302 aa0.73□□□□□ -2.29
GABPB1-209ENST00000559100 NDUFB6O95139 128 aa0.73□□□□□ -2.29
GABPB1-209ENST00000559100 SPINT3P49223 89 aa0.73□□□□□ -2.29
GABPB1-209ENST00000559100 FXYD6P3P58550 94 aa0.73□□□□□ -2.29
GABPB1-209ENST00000559100 DPH3Q96FX2 82 aa0.73□□□□□ -2.29
GABPB1-209ENST00000559100 BET1LQ9NYM9 111 aa0.73□□□□□ -2.29
GABPB1-209ENST00000559100 WDR97A6NE52 1622 aa0.73□□□□□ -2.29
GABPB1-209ENST00000559100 ASCC3Q8N3C0 2202 aaKnown RBP0.73□□□□□ -2.29
GABPB1-209ENST00000559100 GRIN2AQ12879 1464 aa0.73□□□□□ -2.29
GABPB1-209ENST00000559100 OTOGLQ3ZCN5 2332 aa0.72□□□□□ -2.29
GABPB1-209ENST00000559100 CTTNBP2Q8WZ74 1663 aa0.72□□□□□ -2.29
GABPB1-209ENST00000559100 EML5Q05BV3 1969 aa0.72□□□□□ -2.29
GABPB1-209ENST00000559100 MYH13Q9UKX3 1938 aa0.72□□□□□ -2.29
GABPB1-209ENST00000559100 A0A1B0GV90 55 aa0.72□□□□□ -2.29
GABPB1-209ENST00000559100 IFNA17P01571 189 aa0.72□□□□□ -2.29
GABPB1-209ENST00000559100 APODP05090 189 aa0.72□□□□□ -2.29
GABPB1-209ENST00000559100 AKAIN1P0CW23 69 aa0.72□□□□□ -2.29
GABPB1-209ENST00000559100 C9orf116Q5BN46 136 aaPredicted RBP0.72□□□□□ -2.29
GABPB1-209ENST00000559100 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.72□□□□□ -2.29
GABPB1-209ENST00000559100 PLAC4Q8WY50 150 aa0.72□□□□□ -2.29
GABPB1-209ENST00000559100 TMEM14BQ9NUH8 114 aa0.72□□□□□ -2.29
GABPB1-209ENST00000559100 TMEM2Q9UHN6 1383 aa0.71□□□□□ -2.3
GABPB1-209ENST00000559100 CASZ1Q86V15 1759 aa0.71□□□□□ -2.3
GABPB1-209ENST00000559100 RBAKDNA6NC62 111 aa0.71□□□□□ -2.3
GABPB1-209ENST00000559100 SNAPC5O75971 98 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms