RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 MARVELD1Q9BSK0 173 aa5□□□□□ -1.61
SPG11-213ENST00000558988 TREM1Q9NP99 234 aa5□□□□□ -1.61
SPG11-213ENST00000558988 FRAS1Q86XX4 4008 aa5□□□□□ -1.61
SPG11-213ENST00000558988 LOC100131303A0A0U1RQF7 123 aa4.99□□□□□ -1.61
SPG11-213ENST00000558988 CDK2AP2O75956 126 aa4.99□□□□□ -1.61
SPG11-213ENST00000558988 ARL14EPLP0DKL9 152 aa4.99□□□□□ -1.61
SPG11-213ENST00000558988 PPT1P50897 306 aa4.99□□□□□ -1.61
SPG11-213ENST00000558988 LYPD5Q6UWN5 251 aa4.99□□□□□ -1.61
SPG11-213ENST00000558988 WFDC10BQ8IUB3 73 aa4.99□□□□□ -1.61
SPG11-213ENST00000558988 OR4C5Q8NGB2 326 aa4.99□□□□□ -1.61
SPG11-213ENST00000558988 C18orf15Q96N68 181 aa4.99□□□□□ -1.61
SPG11-213ENST00000558988 NDFIP1Q9BT67 221 aa4.99□□□□□ -1.61
SPG11-213ENST00000558988 SDF2L1Q9HCN8 221 aa4.99□□□□□ -1.61
SPG11-213ENST00000558988 SCRT2Q9NQ03 307 aa4.99□□□□□ -1.61
SPG11-213ENST00000558988 ALG5Q9Y673 324 aa4.99□□□□□ -1.61
SPG11-213ENST00000558988 LY96Q9Y6Y9 160 aa4.99□□□□□ -1.61
SPG11-213ENST00000558988 KIAA1109Q2LD37 5005 aa4.99□□□□□ -1.61
SPG11-213ENST00000558988 IGHV3-73A0A0B4J1V6 119 aa4.98□□□□□ -1.61
SPG11-213ENST00000558988 TRBV7-9A0A0J9YWB2 115 aa4.98□□□□□ -1.61
SPG11-213ENST00000558988 K7EQD1 137 aa4.98□□□□□ -1.61
SPG11-213ENST00000558988 TYMSP04818 313 aa4.98□□□□□ -1.61
SPG11-213ENST00000558988 CDC34P49427 236 aaPredicted RBP4.98□□□□□ -1.61
SPG11-213ENST00000558988 ERVFC1-1P60608 527 aa4.98□□□□□ -1.61
SPG11-213ENST00000558988 SLAQ13239 276 aa4.98□□□□□ -1.61
SPG11-213ENST00000558988 Q6AWC8 147 aa4.98□□□□□ -1.61
SPG11-213ENST00000558988 PQLC2Q6ZP29 291 aa4.98□□□□□ -1.61
SPG11-213ENST00000558988 TVP23CQ96ET8 276 aa4.98□□□□□ -1.61
SPG11-213ENST00000558988 SPXQ9BT56 116 aa4.98□□□□□ -1.61
SPG11-213ENST00000558988 TRAV9-2A0A087WT02 112 aa4.97□□□□□ -1.61
SPG11-213ENST00000558988 TRAV4A0A0B4J268 109 aa4.97□□□□□ -1.61
SPG11-213ENST00000558988 TRAV21A0A0B4J279 112 aa4.97□□□□□ -1.61
SPG11-213ENST00000558988 M0R2P5 195 aa4.97□□□□□ -1.61
SPG11-213ENST00000558988 EVI2AP22794 236 aa4.97□□□□□ -1.61
SPG11-213ENST00000558988 GCHFRP30047 84 aa4.97□□□□□ -1.61
SPG11-213ENST00000558988 SUMO2P61956 95 aaKnown RBP4.97□□□□□ -1.61
SPG11-213ENST00000558988 PRNTQ86SH4 94 aa4.97□□□□□ -1.61
SPG11-213ENST00000558988 TMEM75Q8N9X5 138 aa4.97□□□□□ -1.61
SPG11-213ENST00000558988 PRSS3P2Q8NHM4 247 aa4.97□□□□□ -1.61
SPG11-213ENST00000558988 ASB13Q8WXK3 278 aa4.97□□□□□ -1.61
SPG11-213ENST00000558988 RASL10AQ92737 203 aa4.97□□□□□ -1.61
SPG11-213ENST00000558988 MED28Q9H204 178 aa4.97□□□□□ -1.61
SPG11-213ENST00000558988 SH3BGRL3Q9H299 93 aa4.97□□□□□ -1.61
SPG11-213ENST00000558988 MSRB1Q9NZV6 116 aa4.97□□□□□ -1.61
SPG11-213ENST00000558988 LENEPQ9Y5L5 61 aa4.97□□□□□ -1.61
SPG11-213ENST00000558988 FXYD6-FXYD2A0A087WZ82 144 aa4.96□□□□□ -1.62
SPG11-213ENST00000558988 FBLL1A6NHQ2 334 aaKnown RBP4.96□□□□□ -1.62
SPG11-213ENST00000558988 K7EQM0 130 aa4.96□□□□□ -1.62
SPG11-213ENST00000558988 PSCAO43653 123 aa4.96□□□□□ -1.62
SPG11-213ENST00000558988 GCGP01275 180 aa4.96□□□□□ -1.62
SPG11-213ENST00000558988 IFNA7P01567 189 aa4.96□□□□□ -1.62
SPG11-213ENST00000558988 IGHV3-30P01768 117 aa4.96□□□□□ -1.62
SPG11-213ENST00000558988 IGHV3-33P01772 117 aa4.96□□□□□ -1.62
SPG11-213ENST00000558988 ORM1P02763 201 aa4.96□□□□□ -1.62
SPG11-213ENST00000558988 CRYGDP07320 174 aa4.96□□□□□ -1.62
SPG11-213ENST00000558988 IGHV3-30-3P0DP02 117 aa4.96□□□□□ -1.62
SPG11-213ENST00000558988 IGHV3-30-5P0DP03 117 aa4.96□□□□□ -1.62
SPG11-213ENST00000558988 ATP6V0CP27449 155 aa4.96□□□□□ -1.62
SPG11-213ENST00000558988 ZNF876PQ49A33 203 aa4.96□□□□□ -1.62
SPG11-213ENST00000558988 ZFP69Q49AA0 526 aa4.96□□□□□ -1.62
SPG11-213ENST00000558988 Q6ZRN7 208 aaPredicted RBP4.96□□□□□ -1.62
SPG11-213ENST00000558988 C5orf17Q8NAS9 161 aa4.96□□□□□ -1.62
SPG11-213ENST00000558988 TMED6Q8WW62 240 aa4.96□□□□□ -1.62
SPG11-213ENST00000558988 TXNDC17Q9BRA2 123 aa4.96□□□□□ -1.62
SPG11-213ENST00000558988 Q9HAA7 133 aa4.96□□□□□ -1.62
SPG11-213ENST00000558988 TRAV34A0A0B4J273 112 aa4.95□□□□□ -1.62
SPG11-213ENST00000558988 TCRAP04437 139 aa4.95□□□□□ -1.62
SPG11-213ENST00000558988 ZNF80P51504 273 aaPredicted RBP4.95□□□□□ -1.62
SPG11-213ENST00000558988 UBE2G2P60604 165 aa4.95□□□□□ -1.62
SPG11-213ENST00000558988 HAMPP81172 84 aa4.95□□□□□ -1.62
SPG11-213ENST00000558988 Q5BKY6 102 aa4.95□□□□□ -1.62
SPG11-213ENST00000558988 OR10J3Q5JRS4 329 aa4.95□□□□□ -1.62
SPG11-213ENST00000558988 PET117Q6UWS5 81 aa4.95□□□□□ -1.62
SPG11-213ENST00000558988 NFE4Q86UQ8 179 aa4.95□□□□□ -1.62
SPG11-213ENST00000558988 KCNS1Q96KK3 526 aa4.95□□□□□ -1.62
SPG11-213ENST00000558988 ACTR3CQ9C0K3 210 aaPredicted RBP4.95□□□□□ -1.62
SPG11-213ENST00000558988 PSG8Q9UQ74 426 aa4.95□□□□□ -1.62
SPG11-213ENST00000558988 VPS13DQ5THJ4 4388 aa4.95□□□□□ -1.62
SPG11-213ENST00000558988 A0A087WTM6 91 aa4.94□□□□□ -1.62
SPG11-213ENST00000558988 BORCS7-ASMTA0A0B4J1R7 106 aa4.94□□□□□ -1.62
SPG11-213ENST00000558988 GGTLC3B5MD39 225 aa4.94□□□□□ -1.62
SPG11-213ENST00000558988 TAAR5O14804 337 aa4.94□□□□□ -1.62
SPG11-213ENST00000558988 PAGE4O60829 102 aa4.94□□□□□ -1.62
SPG11-213ENST00000558988 CXorf1O96002 111 aa4.94□□□□□ -1.62
SPG11-213ENST00000558988 STAG3L2P0CL84 134 aa4.94□□□□□ -1.62
SPG11-213ENST00000558988 STAG3L3P0CL85 134 aa4.94□□□□□ -1.62
SPG11-213ENST00000558988 GATA1P15976 413 aaPredicted RBP4.94□□□□□ -1.62
SPG11-213ENST00000558988 S100A4P26447 101 aaKnown RBP4.94□□□□□ -1.62
SPG11-213ENST00000558988 FGF8P55075 233 aaPredicted RBP4.94□□□□□ -1.62
SPG11-213ENST00000558988 FLI1Q01543 452 aaPredicted RBP4.94□□□□□ -1.62
SPG11-213ENST00000558988 TDRG1Q3Y452 100 aa4.94□□□□□ -1.62
SPG11-213ENST00000558988 SMUG1Q53HV7 270 aa4.94□□□□□ -1.62
SPG11-213ENST00000558988 ZNF506Q5JVG8 444 aa4.94□□□□□ -1.62
SPG11-213ENST00000558988 RPL7L1Q6DKI1 246 aaKnown RBP4.94□□□□□ -1.62
SPG11-213ENST00000558988 DPPA3Q6W0C5 159 aa4.94□□□□□ -1.62
SPG11-213ENST00000558988 SLC25A29Q8N8R3 303 aa4.94□□□□□ -1.62
SPG11-213ENST00000558988 INO80EQ8NBZ0 244 aaPredicted RBP4.94□□□□□ -1.62
SPG11-213ENST00000558988 OR2G3Q8NGZ4 309 aa4.94□□□□□ -1.62
SPG11-213ENST00000558988 LINC00479Q96M42 142 aa4.94□□□□□ -1.62
SPG11-213ENST00000558988 PRADC1Q9BSG0 188 aa4.94□□□□□ -1.62
SPG11-213ENST00000558988 PSMG3Q9BT73 122 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms