RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 MCFD2Q8NI22 146 aa3.48□□□□□ -1.85
LRRC28-208ENST00000558771 FAM210AQ96ND0 272 aa3.48□□□□□ -1.85
LRRC28-208ENST00000558771 SLC25A21Q9BQT8 299 aaPredicted RBP3.48□□□□□ -1.85
LRRC28-208ENST00000558771 GPN1Q9HCN4 374 aaPredicted RBP3.48□□□□□ -1.85
LRRC28-208ENST00000558771 SLC39A9Q9NUM3 307 aa3.48□□□□□ -1.85
LRRC28-208ENST00000558771 RSL24D1Q9UHA3 163 aaKnown RBP3.48□□□□□ -1.85
LRRC28-208ENST00000558771 A0A0A0MQY5 61 aa3.47□□□□□ -1.85
LRRC28-208ENST00000558771 PANO1I0J062 215 aa3.47□□□□□ -1.85
LRRC28-208ENST00000558771 NBEAP1P0C6P0 100 aa3.47□□□□□ -1.85
LRRC28-208ENST00000558771 CAV2P51636 162 aa3.47□□□□□ -1.85
LRRC28-208ENST00000558771 SPCS2Q15005 226 aa3.47□□□□□ -1.85
LRRC28-208ENST00000558771 IAH1Q2TAA2 248 aaPredicted RBP3.47□□□□□ -1.85
LRRC28-208ENST00000558771 GCSAMLQ5JQS6 135 aa3.47□□□□□ -1.85
LRRC28-208ENST00000558771 TOMM5Q8N4H5 51 aa3.47□□□□□ -1.85
LRRC28-208ENST00000558771 DYNC2LI1Q8TCX1 351 aa3.47□□□□□ -1.85
LRRC28-208ENST00000558771 UBE2WQ96B02 151 aa3.47□□□□□ -1.85
LRRC28-208ENST00000558771 PHYHIPLQ96FC7 376 aa3.47□□□□□ -1.85
LRRC28-208ENST00000558771 SLC25A2Q9BXI2 301 aa3.47□□□□□ -1.85
LRRC28-208ENST00000558771 UQCC1Q9NVA1 299 aa3.47□□□□□ -1.85
LRRC28-208ENST00000558771 KLK12Q9UKR0 248 aa3.47□□□□□ -1.85
LRRC28-208ENST00000558771 WDR83OSQ9Y284 106 aa3.47□□□□□ -1.85
LRRC28-208ENST00000558771 A0A0D9SG52 128 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 UBE2L5PA0A1B0GUS4 154 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 RBAKDNA6NC62 111 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 CIDEAO60543 219 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 CST7O76096 145 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 SCGB1D1O95968 90 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 LINC00694P0DN24 101 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 MGST1P10620 155 aaKnown RBP3.46□□□□□ -1.86
LRRC28-208ENST00000558771 INPP1P49441 399 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 BCAP31P51572 246 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 AP3S2P59780 193 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 BAXQ07812 192 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 GAGE1Q13065 139 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 GAGE4Q13068 117 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 GAGE5Q13069 117 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 ZNF876PQ49A33 203 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 C14orf177Q52M58 125 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 MIR17HGQ75NE6 70 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 NIT1Q86X76 327 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 FXYD5Q96DB9 178 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 FAM167A-AS1Q96KT0 104 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 C2orf50Q96LR7 162 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 C20orf85Q9H1P6 137 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 SH3BGRL3Q9H299 93 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 OR51M1Q9H341 326 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 DPH3P1Q9H4G8 78 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 GSKIPQ9P0R6 139 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 LENEPQ9Y5L5 61 aa3.46□□□□□ -1.86
LRRC28-208ENST00000558771 A0A087WWC5 75 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 TRAV21A0A0B4J279 112 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 FAM24AA6NFZ4 105 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 USP17L23D6RBM5 183 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 F6UZH7 168 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 L7N2F9 121 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 SEC11BP0C7V7 166 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 FGF7P21781 194 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 CSN1S1P47710 185 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 RANP62826 216 aaKnown RBP3.45□□□□□ -1.86
LRRC28-208ENST00000558771 FFAR4Q5NUL3 377 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 ATRAIDQ6UW56 229 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 CYB561D1Q8N8Q1 229 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 C9orf163Q8N9P6 203 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 HSD17B11Q8NBQ5 300 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 ASB13Q8WXK3 278 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 LINC01600Q96MT4 127 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 ATP5SQ99766 215 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 SAMD10Q9BYL1 202 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 SDF2L1Q9HCN8 221 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 Q9UF83 564 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 FLVCR2Q9UPI3 526 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 URGCP-MRPS24S4R325 110 aa3.45□□□□□ -1.86
LRRC28-208ENST00000558771 CCSO14618 274 aa3.44□□□□□ -1.86
LRRC28-208ENST00000558771 PRSS1P07477 247 aa3.44□□□□□ -1.86
LRRC28-208ENST00000558771 SMIM18P0DKX4 95 aa3.44□□□□□ -1.86
LRRC28-208ENST00000558771 Q0VG73 95 aa3.44□□□□□ -1.86
LRRC28-208ENST00000558771 PYDC2Q56P42 97 aa3.44□□□□□ -1.86
LRRC28-208ENST00000558771 ZNF506Q5JVG8 444 aa3.44□□□□□ -1.86
LRRC28-208ENST00000558771 SDIM1Q6ZPB5 146 aa3.44□□□□□ -1.86
LRRC28-208ENST00000558771 OR10G9Q8NGN4 311 aa3.44□□□□□ -1.86
LRRC28-208ENST00000558771 TMED6Q8WW62 240 aa3.44□□□□□ -1.86
LRRC28-208ENST00000558771 TMEM18Q96B42 140 aa3.44□□□□□ -1.86
LRRC28-208ENST00000558771 TVP23CQ96ET8 276 aa3.44□□□□□ -1.86
LRRC28-208ENST00000558771 ZC2HC1AQ96GY0 325 aa3.44□□□□□ -1.86
LRRC28-208ENST00000558771 KCNS1Q96KK3 526 aa3.44□□□□□ -1.86
LRRC28-208ENST00000558771 C9orf85Q96MD7 179 aa3.44□□□□□ -1.86
LRRC28-208ENST00000558771 NPCDR1Q9BY65 106 aa3.44□□□□□ -1.86
LRRC28-208ENST00000558771 C11orf1Q9H5F2 150 aa3.44□□□□□ -1.86
LRRC28-208ENST00000558771 LSM5Q9Y4Y9 91 aaKnown RBP3.44□□□□□ -1.86
LRRC28-208ENST00000558771 MUC2Q02817 5179 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 A0A087WX48 190 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 A0A0J9YXV3 536 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 IGSF23A1L1A6 192 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 PHOX2AO14813 284 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 OR7C2O60412 319 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 NDUFB6O95139 128 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 HLA-DQA1P01909 254 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 PRSS2P07478 247 aa3.43□□□□□ -1.86
LRRC28-208ENST00000558771 S100A11P31949 105 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms