RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 A0A087WX48 190 aa11.54□□□□□ -0.56
TSPAN3-204ENST00000558394 PLA2G10O15496 165 aa11.54□□□□□ -0.56
TSPAN3-204ENST00000558394 TCRBP04435 133 aa11.54□□□□□ -0.56
TSPAN3-204ENST00000558394 NIT1Q86X76 327 aa11.54□□□□□ -0.56
TSPAN3-204ENST00000558394 OR5C1Q8NGR4 320 aa11.54□□□□□ -0.56
TSPAN3-204ENST00000558394 DNAJC30Q96LL9 226 aa11.54□□□□□ -0.56
TSPAN3-204ENST00000558394 SEC22CQ9BRL7 303 aa11.54□□□□□ -0.56
TSPAN3-204ENST00000558394 DPH3P1Q9H4G8 78 aa11.54□□□□□ -0.56
TSPAN3-204ENST00000558394 PGPEP1LA6NFU8 196 aa11.53□□□□□ -0.56
TSPAN3-204ENST00000558394 Q0VG73 95 aa11.53□□□□□ -0.56
TSPAN3-204ENST00000558394 OR2T35Q8NGX2 323 aa11.53□□□□□ -0.56
TSPAN3-204ENST00000558394 PTH2Q96A98 100 aa11.53□□□□□ -0.56
TSPAN3-204ENST00000558394 A0A0D9SG52 128 aa11.52□□□□□ -0.57
TSPAN3-204ENST00000558394 A8MWV9 139 aa11.52□□□□□ -0.57
TSPAN3-204ENST00000558394 TAAR5O14804 337 aa11.52□□□□□ -0.57
TSPAN3-204ENST00000558394 NHLH2Q02577 135 aa11.52□□□□□ -0.57
TSPAN3-204ENST00000558394 ZFP2Q6ZN57 461 aa11.52□□□□□ -0.57
TSPAN3-204ENST00000558394 TVP23CQ96ET8 276 aa11.52□□□□□ -0.57
TSPAN3-204ENST00000558394 C9orf85Q96MD7 179 aa11.52□□□□□ -0.57
TSPAN3-204ENST00000558394 C1orf43Q9BWL3 253 aa11.52□□□□□ -0.57
TSPAN3-204ENST00000558394 MBD2Q9UBB5 411 aa11.52□□□□□ -0.57
TSPAN3-204ENST00000558394 LINC00694P0DN24 101 aa11.51□□□□□ -0.57
TSPAN3-204ENST00000558394 ASIPP42127 132 aa11.51□□□□□ -0.57
TSPAN3-204ENST00000558394 LGALSLQ3ZCW2 172 aaPredicted RBP11.51□□□□□ -0.57
TSPAN3-204ENST00000558394 HSD17B11Q8NBQ5 300 aa11.51□□□□□ -0.57
TSPAN3-204ENST00000558394 CHCHD7Q9BUK0 85 aa11.51□□□□□ -0.57
TSPAN3-204ENST00000558394 WDR61Q9GZS3 305 aaKnown RBP11.51□□□□□ -0.57
TSPAN3-204ENST00000558394 PARLQ9H300 379 aa11.51□□□□□ -0.57
TSPAN3-204ENST00000558394 DMRTA1Q5VZB9 504 aa11.5□□□□□ -0.57
TSPAN3-204ENST00000558394 ARL6IP6Q8N6S5 226 aa11.5□□□□□ -0.57
TSPAN3-204ENST00000558394 CRPP02741 224 aa11.49□□□□□ -0.57
TSPAN3-204ENST00000558394 ZFP69Q49AA0 526 aa11.49□□□□□ -0.57
TSPAN3-204ENST00000558394 ATRAIDQ6UW56 229 aa11.49□□□□□ -0.57
TSPAN3-204ENST00000558394 ZC2HC1AQ96GY0 325 aa11.49□□□□□ -0.57
TSPAN3-204ENST00000558394 CCDC32Q9BV29 185 aa11.49□□□□□ -0.57
TSPAN3-204ENST00000558394 SAMD10Q9BYL1 202 aa11.49□□□□□ -0.57
TSPAN3-204ENST00000558394 H2AFB2P0C5Z0 115 aa11.48□□□□□ -0.57
TSPAN3-204ENST00000558394 S100A4P26447 101 aaKnown RBP11.48□□□□□ -0.57
TSPAN3-204ENST00000558394 SGK494Q96LW2 274 aa11.48□□□□□ -0.57
TSPAN3-204ENST00000558394 GCGP01275 180 aa11.47□□□□□ -0.57
TSPAN3-204ENST00000558394 GNG5P63218 68 aa11.47□□□□□ -0.57
TSPAN3-204ENST00000558394 IL15RAQ13261 267 aa11.47□□□□□ -0.57
TSPAN3-204ENST00000558394 DGAT2L7PQ6IED9 249 aa11.47□□□□□ -0.57
TSPAN3-204ENST00000558394 C14orf178Q8N769 122 aaPredicted RBP11.47□□□□□ -0.57
TSPAN3-204ENST00000558394 TMEM75Q8N9X5 138 aa11.47□□□□□ -0.57
TSPAN3-204ENST00000558394 C11orf21Q9P2W6 132 aa11.47□□□□□ -0.57
TSPAN3-204ENST00000558394 SERTM2A0A1B0GWG4 89 aa11.46□□□□□ -0.57
TSPAN3-204ENST00000558394 USP17L23D6RBM5 183 aa11.46□□□□□ -0.57
TSPAN3-204ENST00000558394 TMEM262E9PQX1 116 aa11.46□□□□□ -0.57
TSPAN3-204ENST00000558394 K7EQM0 130 aa11.46□□□□□ -0.57
TSPAN3-204ENST00000558394 HLA-DQA1P01909 254 aa11.46□□□□□ -0.57
TSPAN3-204ENST00000558394 RNASE3P12724 160 aaKnown RBP11.46□□□□□ -0.57
TSPAN3-204ENST00000558394 ZNF80P51504 273 aaPredicted RBP11.46□□□□□ -0.57
TSPAN3-204ENST00000558394 OR2G3Q8NGZ4 309 aa11.46□□□□□ -0.57
TSPAN3-204ENST00000558394 LINC00479Q96M42 142 aa11.46□□□□□ -0.57
TSPAN3-204ENST00000558394 OR5AC2Q9NZP5 309 aa11.46□□□□□ -0.57
TSPAN3-204ENST00000558394 NDUFA13Q9P0J0 144 aa11.46□□□□□ -0.57
TSPAN3-204ENST00000558394 Q9UF83 564 aa11.46□□□□□ -0.57
TSPAN3-204ENST00000558394 FAM240BA0A1B0GVZ2 78 aa11.45□□□□□ -0.58
TSPAN3-204ENST00000558394 SMUG1Q53HV7 270 aa11.45□□□□□ -0.58
TSPAN3-204ENST00000558394 PIK3CD-AS1Q5SR53 167 aa11.45□□□□□ -0.58
TSPAN3-204ENST00000558394 PQLC2Q6ZP29 291 aa11.45□□□□□ -0.58
TSPAN3-204ENST00000558394 DPH3Q96FX2 82 aa11.45□□□□□ -0.58
TSPAN3-204ENST00000558394 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.45□□□□□ -0.58
TSPAN3-204ENST00000558394 A0A1W2PPV4 95 aa11.44□□□□□ -0.58
TSPAN3-204ENST00000558394 RHODO00212 210 aa11.44□□□□□ -0.58
TSPAN3-204ENST00000558394 EIF3GO75821 320 aaKnown RBP eCLIP11.44□□□□□ -0.58
TSPAN3-204ENST00000558394 C9orf163Q8N9P6 203 aa11.44□□□□□ -0.58
TSPAN3-204ENST00000558394 SCGB1C1Q8TD33 95 aa11.44□□□□□ -0.58
TSPAN3-204ENST00000558394 MZT2BQ6NZ67 158 aa11.43□□□□□ -0.58
TSPAN3-204ENST00000558394 C15orf54Q8N8G6 183 aa11.43□□□□□ -0.58
TSPAN3-204ENST00000558394 TNXBP22105 4242 aa11.42□□□□□ -0.58
TSPAN3-204ENST00000558394 FAM74A4Q5TZK3 123 aa11.42□□□□□ -0.58
TSPAN3-204ENST00000558394 JPT2Q9H910 190 aa11.42□□□□□ -0.58
TSPAN3-204ENST00000558394 PSG8Q9UQ74 426 aa11.42□□□□□ -0.58
TSPAN3-204ENST00000558394 PRSS1P07477 247 aa11.41□□□□□ -0.58
TSPAN3-204ENST00000558394 RPL19P84098 196 aaKnown RBP11.41□□□□□ -0.58
TSPAN3-204ENST00000558394 LRRC37A5PQ49AS3 106 aa11.41□□□□□ -0.58
TSPAN3-204ENST00000558394 ENHOQ6UWT2 76 aa11.41□□□□□ -0.58
TSPAN3-204ENST00000558394 OR10G7Q8NGN6 311 aa11.41□□□□□ -0.58
TSPAN3-204ENST00000558394 ANGP03950 147 aaKnown RBP11.4□□□□□ -0.58
TSPAN3-204ENST00000558394 RPL36AP83881 106 aaKnown RBP11.4□□□□□ -0.58
TSPAN3-204ENST00000558394 PRNTQ86SH4 94 aa11.4□□□□□ -0.58
TSPAN3-204ENST00000558394 ENKURQ8TC29 256 aa11.4□□□□□ -0.58
TSPAN3-204ENST00000558394 RPL36ALQ969Q0 106 aaKnown RBP11.4□□□□□ -0.58
TSPAN3-204ENST00000558394 PANO1I0J062 215 aa11.39□□□□□ -0.59
TSPAN3-204ENST00000558394 TCRAP04437 139 aa11.39□□□□□ -0.59
TSPAN3-204ENST00000558394 FLI1Q01543 452 aaPredicted RBP11.39□□□□□ -0.59
TSPAN3-204ENST00000558394 UFSP1Q6NVU6 142 aa11.39□□□□□ -0.59
TSPAN3-204ENST00000558394 C5orf17Q8NAS9 161 aa11.39□□□□□ -0.59
TSPAN3-204ENST00000558394 SIX6O95475 246 aa11.38□□□□□ -0.59
TSPAN3-204ENST00000558394 MIAQ16674 131 aa11.38□□□□□ -0.59
TSPAN3-204ENST00000558394 SAPCD1Q5SSQ6 148 aa11.38□□□□□ -0.59
TSPAN3-204ENST00000558394 SDIM1Q6ZPB5 146 aa11.38□□□□□ -0.59
TSPAN3-204ENST00000558394 LINC00299Q6ZSB3 139 aa11.38□□□□□ -0.59
TSPAN3-204ENST00000558394 S100ZQ8WXG8 99 aa11.38□□□□□ -0.59
TSPAN3-204ENST00000558394 IL36BQ9NZH7 164 aa11.38□□□□□ -0.59
TSPAN3-204ENST00000558394 H3BVH4 76 aa11.37□□□□□ -0.59
TSPAN3-204ENST00000558394 HMGB3O15347 200 aaKnown RBP11.37□□□□□ -0.59
TSPAN3-204ENST00000558394 OR11H4Q8NGC9 324 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms