RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 ZFAND6Q6FIF0 208 aa6.36□□□□□ -1.39
USP3-208ENST00000558285 UFSP1Q6NVU6 142 aa6.36□□□□□ -1.39
USP3-208ENST00000558285 NEGR1Q7Z3B1 354 aa6.36□□□□□ -1.39
USP3-208ENST00000558285 DNAH3Q8TD57 4116 aa6.36□□□□□ -1.39
USP3-208ENST00000558285 A0A0J9YWU9 116 aa6.36□□□□□ -1.39
USP3-208ENST00000558285 UBE2L5PA0A1B0GUS4 154 aa6.36□□□□□ -1.39
USP3-208ENST00000558285 C9JCJ5 164 aa6.36□□□□□ -1.39
USP3-208ENST00000558285 H3BMM0 161 aa6.36□□□□□ -1.39
USP3-208ENST00000558285 PSG9Q00887 426 aa6.36□□□□□ -1.39
USP3-208ENST00000558285 HIST1H1AQ02539 215 aaPredicted RBP6.36□□□□□ -1.39
USP3-208ENST00000558285 AMMECR1LQ6DCA0 310 aa6.36□□□□□ -1.39
USP3-208ENST00000558285 LINC00305Q7Z4B0 112 aa6.36□□□□□ -1.39
USP3-208ENST00000558285 RPP25LQ8N5L8 163 aaKnown RBP6.36□□□□□ -1.39
USP3-208ENST00000558285 C11orf45Q8TAV5 145 aa6.36□□□□□ -1.39
USP3-208ENST00000558285 SIGMAR1Q99720 223 aa6.36□□□□□ -1.39
USP3-208ENST00000558285 WDR83OSQ9Y284 106 aa6.36□□□□□ -1.39
USP3-208ENST00000558285 A0A087X0K7 114 aa6.35□□□□□ -1.39
USP3-208ENST00000558285 PGPEP1LA6NFU8 196 aa6.35□□□□□ -1.39
USP3-208ENST00000558285 GAGE10A6NGK3 116 aa6.35□□□□□ -1.39
USP3-208ENST00000558285 J3QR89 54 aa6.35□□□□□ -1.39
USP3-208ENST00000558285 GATA2P23769 480 aaPredicted RBP6.35□□□□□ -1.39
USP3-208ENST00000558285 TCTAP57738 103 aa6.35□□□□□ -1.39
USP3-208ENST00000558285 VWC2Q2TAL6 325 aa6.35□□□□□ -1.39
USP3-208ENST00000558285 SLC25A34Q6PIV7 304 aa6.35□□□□□ -1.39
USP3-208ENST00000558285 ARL2-SNX15V9GYD0 113 aa6.35□□□□□ -1.39
USP3-208ENST00000558285 STAB2Q8WWQ8 2551 aa6.35□□□□□ -1.39
USP3-208ENST00000558285 TRAV34A0A0B4J273 112 aa6.34□□□□□ -1.39
USP3-208ENST00000558285 SNURFLB1AK76 121 aa6.34□□□□□ -1.39
USP3-208ENST00000558285 CRXO43186 299 aaPredicted RBP6.34□□□□□ -1.39
USP3-208ENST00000558285 TNFRSF6BO95407 300 aa6.34□□□□□ -1.39
USP3-208ENST00000558285 OR10G9Q8NGN4 311 aa6.34□□□□□ -1.39
USP3-208ENST00000558285 OR10G7Q8NGN6 311 aa6.34□□□□□ -1.39
USP3-208ENST00000558285 SERTM2A0A1B0GWG4 89 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 PAGE4O60829 102 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 UBE2G1P62253 170 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 C5orf17Q8NAS9 161 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 OR10J6PQ8NGY7 276 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 AP1S3Q96PC3 154 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 MGST2Q99735 147 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 KRTAP4-9Q9BYQ8 210 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 AAMDCQ9H7C9 122 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 TENM3Q9P273 2699 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 A0A0J9YX75 114 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 A6NDN8 102 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 H3BRM9 83 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 K7EP34 96 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 SOCS3O14543 225 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 INSP01308 110 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 TAS2R45P59539 299 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 CEMP1Q6PRD7 247 aaPredicted RBP6.33□□□□□ -1.4
USP3-208ENST00000558285 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 TSKUQ8WUA8 353 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 C11orf52Q96A22 123 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 MRPL32Q9BYC8 188 aaKnown RBP6.33□□□□□ -1.4
USP3-208ENST00000558285 XCL2Q9UBD3 114 aa6.33□□□□□ -1.4
USP3-208ENST00000558285 NUDT3O95989 172 aa6.32□□□□□ -1.4
USP3-208ENST00000558285 IGKV3-20P01619 116 aa6.32□□□□□ -1.4
USP3-208ENST00000558285 PMCHP20382 165 aa6.32□□□□□ -1.4
USP3-208ENST00000558285 PDE6HQ13956 83 aa6.32□□□□□ -1.4
USP3-208ENST00000558285 MPV17L2Q567V2 206 aa6.32□□□□□ -1.4
USP3-208ENST00000558285 Q6ZVH6 145 aa6.32□□□□□ -1.4
USP3-208ENST00000558285 FA2HQ7L5A8 372 aa6.32□□□□□ -1.4
USP3-208ENST00000558285 NPCDR1Q9BY65 106 aa6.32□□□□□ -1.4
USP3-208ENST00000558285 NAT8BQ9UHF3 227 aa6.32□□□□□ -1.4
USP3-208ENST00000558285 LCE6AA0A183 80 aa6.31□□□□□ -1.4
USP3-208ENST00000558285 C9orf118A6NHY6 69 aa6.31□□□□□ -1.4
USP3-208ENST00000558285 SPART-AS1P0CW21 52 aa6.31□□□□□ -1.4
USP3-208ENST00000558285 ARL16Q0P5N6 197 aa6.31□□□□□ -1.4
USP3-208ENST00000558285 RRN3P1Q2M238 152 aa6.31□□□□□ -1.4
USP3-208ENST00000558285 MIC13Q5XKP0 118 aa6.31□□□□□ -1.4
USP3-208ENST00000558285 TMEM136Q6ZRR5 245 aa6.31□□□□□ -1.4
USP3-208ENST00000558285 IGF2BP2-AS1Q96M15 143 aa6.31□□□□□ -1.4
USP3-208ENST00000558285 TMEM70Q9BUB7 260 aa6.31□□□□□ -1.4
USP3-208ENST00000558285 TMEM191AQ9H0A3 160 aa6.31□□□□□ -1.4
USP3-208ENST00000558285 OSTCQ9NRP0 149 aa6.31□□□□□ -1.4
USP3-208ENST00000558285 TMEM14CQ9P0S9 112 aa6.31□□□□□ -1.4
USP3-208ENST00000558285 IGHV4-28A0A0C4DH34 117 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 H0Y8G0 127 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 HSBP1O75506 76 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 NDUFB4O95168 129 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 OR5AL1P0C617 328 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 HIST1H1EP10412 219 aaKnown RBP6.3□□□□□ -1.4
USP3-208ENST00000558285 CSN1S1P47710 185 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 OR8A1Q8NGG7 326 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 C18orf32Q8TCD1 76 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 PHLDA1Q8WV24 401 aaPredicted RBP6.3□□□□□ -1.4
USP3-208ENST00000558285 MRPL53Q96EL3 112 aaKnown RBP6.3□□□□□ -1.4
USP3-208ENST00000558285 MRAP2Q96G30 205 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 KRTAP4-2Q9BYR5 136 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 IGHV3OR16-12A0A075B7B8 117 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 TRAV10A0A0B4J240 114 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 TRAV8-6A0A0B4J262 113 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 MUC21A0A0G2JKD1 596 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 MUC21A0A140T8X8 626 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 C7orf71A4D174 169 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 AZU1P20160 251 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 LEPP41159 167 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 CKS1BP61024 79 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 HSD52Q0P140 79 aa6.3□□□□□ -1.4
USP3-208ENST00000558285 MUC21Q5SSG8 566 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms