RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 TRGV11A0A075B6L2 103 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 TRAV8-1A0A0A6YYK1 113 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 LOC100131303A0A0U1RQF7 123 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 LINC00862A6NCI5 91 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 GGTLC3B5MD39 225 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 TSTD3H0UI37 97 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 M0R2P5 195 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 CTDSP2O14595 271 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 TNFRSF6BO95407 300 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 PPBPP02775 128 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 SEC11BP0C7V7 166 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 GATA1P15976 413 aaPredicted RBP3.39□□□□□ -1.87
SPG11-208ENST00000558155 ASIPP42127 132 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 ZNF138P52744 262 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 PDE6HQ13956 83 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 TMEM183BQ1AE95 376 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 VWC2Q2TAL6 325 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 MUC21Q5SSG8 566 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 DNLZQ5SXM8 178 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 Q6ZQT7 251 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 TMEM183AQ8IXX5 376 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 ZFP82Q8N141 532 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 DAZAP1Q96EP5 407 aaKnown RBP3.39□□□□□ -1.87
SPG11-208ENST00000558155 SMIM12Q96EX1 92 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 SLC25A21Q9BQT8 299 aaPredicted RBP3.39□□□□□ -1.87
SPG11-208ENST00000558155 ALKBH7Q9BT30 221 aaPredicted RBP3.39□□□□□ -1.87
SPG11-208ENST00000558155 PAXXQ9BUH6 204 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 GTSF1LQ9H1H1 148 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 C20orf85Q9H1P6 137 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 DPH3P1Q9H4G8 78 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 SLC39A9Q9NUM3 307 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 TMEM14CQ9P0S9 112 aa3.39□□□□□ -1.87
SPG11-208ENST00000558155 IGKV2-40A0A087WW87 121 aaPredicted RBP3.38□□□□□ -1.87
SPG11-208ENST00000558155 IGHV3-16A0A0C4DH30 117 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 A0A1B0GW15 77 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 FBLL1A6NHQ2 334 aaKnown RBP3.38□□□□□ -1.87
SPG11-208ENST00000558155 KRBOX1C9JBD0 128 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 SSSCA1O60232 199 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 NDUFB4O95168 129 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 PTTG1O95997 202 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 IGKV2D-40P01614 121 aaPredicted RBP3.38□□□□□ -1.87
SPG11-208ENST00000558155 MT1HL1P0DM35 61 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 SCGB1A1P11684 91 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 CSN1S1P47710 185 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 TAS2R30P59541 319 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 UBE2MP61081 183 aaKnown RBP3.38□□□□□ -1.87
SPG11-208ENST00000558155 ZNF266Q14584 549 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 C14orf177Q52M58 125 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 PRR9Q5T870 116 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 MIC13Q5XKP0 118 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 NRARPQ7Z6K4 114 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 EXOC3-AS1Q8N2X6 119 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 HSD17B11Q8NBQ5 300 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 DYNC2LI1Q8TCX1 351 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 MGST2Q99735 147 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 ATP5SQ99766 215 aa3.38□□□□□ -1.87
SPG11-208ENST00000558155 IGKV2D-24A0A075B6R9 120 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 A0A0D9SG52 128 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 TRBV6-4A0A1B0GX49 114 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 M0R036 132 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 ARPC5O15511 151 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 DLEU1O43261 78 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 GNRH2O43555 120 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 OR10J4P0C629 311 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 NBEAP1P0C6P0 100 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 RPL29P47914 159 aaKnown RBP3.37□□□□□ -1.87
SPG11-208ENST00000558155 HNRNPA3P51991 378 aaKnown RBP3.37□□□□□ -1.87
SPG11-208ENST00000558155 RAB2AP61019 212 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 ARL16Q0P5N6 197 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 PPP1R1AQ13522 171 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 RHOHQ15669 191 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 CTF1Q16619 201 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 FFAR4Q5NUL3 377 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 Q6AWC8 147 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 MRPL52Q86TS9 123 aaKnown RBP3.37□□□□□ -1.87
SPG11-208ENST00000558155 SLC25A29Q8N8R3 303 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 MCFD2Q8NI22 146 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 C2orf50Q96LR7 162 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 SOSTQ9BQB4 213 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 GEMIN7Q9H840 131 aaKnown RBP3.37□□□□□ -1.87
SPG11-208ENST00000558155 GSKIPQ9P0R6 139 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 LENEPQ9Y5L5 61 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 URGCP-MRPS24S4R325 110 aa3.37□□□□□ -1.87
SPG11-208ENST00000558155 A0A087WWC5 75 aa3.36□□□□□ -1.87
SPG11-208ENST00000558155 C9orf170A2RU37 121 aa3.36□□□□□ -1.87
SPG11-208ENST00000558155 RBAKDNA6NC62 111 aa3.36□□□□□ -1.87
SPG11-208ENST00000558155 C5orf52A6NGY3 159 aa3.36□□□□□ -1.87
SPG11-208ENST00000558155 PET100P0DJ07 73 aa3.36□□□□□ -1.87
SPG11-208ENST00000558155 PYYP10082 97 aa3.36□□□□□ -1.87
SPG11-208ENST00000558155 RBX1P62877 108 aa3.36□□□□□ -1.87
SPG11-208ENST00000558155 ELOBQ15370 118 aa3.36□□□□□ -1.87
SPG11-208ENST00000558155 VAMP3Q15836 100 aa3.36□□□□□ -1.87
SPG11-208ENST00000558155 COX19Q49B96 90 aa3.36□□□□□ -1.87
SPG11-208ENST00000558155 C5orf47Q569G3 176 aa3.36□□□□□ -1.87
SPG11-208ENST00000558155 DAZ4Q86SG3 579 aaKnown RBP3.36□□□□□ -1.87
SPG11-208ENST00000558155 TOMM5Q8N4H5 51 aa3.36□□□□□ -1.87
SPG11-208ENST00000558155 SFT2D1Q8WV19 159 aa3.36□□□□□ -1.87
SPG11-208ENST00000558155 DEDD2Q8WXF8 326 aa3.36□□□□□ -1.87
SPG11-208ENST00000558155 VPS25Q9BRG1 176 aa3.36□□□□□ -1.87
SPG11-208ENST00000558155 NAA50Q9GZZ1 169 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms