RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 OVOL1O14753 267 aa13.33□□□□□ -0.27
XRCC3-218ENST00000557439 SUMO2P61956 95 aaKnown RBP13.33□□□□□ -0.27
XRCC3-218ENST00000557439 UFSP1Q6NVU6 142 aa13.33□□□□□ -0.27
XRCC3-218ENST00000557439 DOPEY1Q5JWR5 2465 aa13.33□□□□□ -0.28
XRCC3-218ENST00000557439 RNF223E7ERA6 249 aa13.33□□□□□ -0.28
XRCC3-218ENST00000557439 IGKV3-20P01619 116 aa13.33□□□□□ -0.28
XRCC3-218ENST00000557439 CDKN1BP46527 198 aa13.33□□□□□ -0.28
XRCC3-218ENST00000557439 A0A087WX48 190 aa13.32□□□□□ -0.28
XRCC3-218ENST00000557439 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.32□□□□□ -0.28
XRCC3-218ENST00000557439 MSMBP08118 114 aa13.32□□□□□ -0.28
XRCC3-218ENST00000557439 MRAP2Q96G30 205 aa13.32□□□□□ -0.28
XRCC3-218ENST00000557439 USMG5Q96IX5 58 aa13.32□□□□□ -0.28
XRCC3-218ENST00000557439 DPH3P1Q9H4G8 78 aa13.32□□□□□ -0.28
XRCC3-218ENST00000557439 LENEPQ9Y5L5 61 aa13.32□□□□□ -0.28
XRCC3-218ENST00000557439 SCGB3A1Q96QR1 104 aa13.31□□□□□ -0.28
XRCC3-218ENST00000557439 NHP2Q9NX24 153 aaKnown RBP13.31□□□□□ -0.28
XRCC3-218ENST00000557439 CACNA1AO00555 2505 aa13.31□□□□□ -0.28
XRCC3-218ENST00000557439 FAM19A4Q96LR4 140 aa13.31□□□□□ -0.28
XRCC3-218ENST00000557439 CUBNO60494 3623 aa13.31□□□□□ -0.28
XRCC3-218ENST00000557439 ZFYVE26Q68DK2 2539 aa13.31□□□□□ -0.28
XRCC3-218ENST00000557439 DAZ1Q9NQZ3 744 aaKnown RBP13.3□□□□□ -0.28
XRCC3-218ENST00000557439 FBN2P35556 2912 aa13.3□□□□□ -0.28
XRCC3-218ENST00000557439 K7EP34 96 aa13.3□□□□□ -0.28
XRCC3-218ENST00000557439 IGLV1-40P01703 118 aa13.3□□□□□ -0.28
XRCC3-218ENST00000557439 IGHV4-59P01825 116 aa13.3□□□□□ -0.28
XRCC3-218ENST00000557439 ATP6V0BQ99437 205 aa13.3□□□□□ -0.28
XRCC3-218ENST00000557439 VPS25Q9BRG1 176 aa13.3□□□□□ -0.28
XRCC3-218ENST00000557439 A0A087WWL8 130 aa13.29□□□□□ -0.28
XRCC3-218ENST00000557439 TRAV12-3A0A0B4J271 114 aa13.29□□□□□ -0.28
XRCC3-218ENST00000557439 A0A1W2PPM0 123 aa13.29□□□□□ -0.28
XRCC3-218ENST00000557439 SMPXQ9UHP9 88 aa13.29□□□□□ -0.28
XRCC3-218ENST00000557439 SPCS1Q9Y6A9 102 aa13.29□□□□□ -0.28
XRCC3-218ENST00000557439 FAM208BQ5VWN6 2430 aa13.29□□□□□ -0.28
XRCC3-218ENST00000557439 CREBBPQ92793 2442 aa13.29□□□□□ -0.28
XRCC3-218ENST00000557439 TRAV12-2A0A075B6T6 113 aa13.28□□□□□ -0.28
XRCC3-218ENST00000557439 SMIM13P0DJ93 91 aa13.28□□□□□ -0.28
XRCC3-218ENST00000557439 EMP1P54849 157 aa13.28□□□□□ -0.28
XRCC3-218ENST00000557439 C2orf66Q6UXQ4 117 aa13.28□□□□□ -0.28
XRCC3-218ENST00000557439 ZNF688P0C7X2 276 aa13.28□□□□□ -0.28
XRCC3-218ENST00000557439 GTF2H5Q6ZYL4 71 aa13.28□□□□□ -0.28
XRCC3-218ENST00000557439 CSTL1Q9H114 145 aa13.28□□□□□ -0.28
XRCC3-218ENST00000557439 ACACBO00763 2458 aa13.28□□□□□ -0.28
XRCC3-218ENST00000557439 CHTOPQ9Y3Y2 248 aaKnown RBP13.27□□□□□ -0.28
XRCC3-218ENST00000557439 MXRA5Q9NR99 2828 aa13.27□□□□□ -0.28
XRCC3-218ENST00000557439 ANKRD17O75179 2603 aaKnown RBP13.27□□□□□ -0.28
XRCC3-218ENST00000557439 SAMD5Q5TGI4 173 aa13.27□□□□□ -0.29
XRCC3-218ENST00000557439 TOMM6Q96B49 74 aa13.27□□□□□ -0.29
XRCC3-218ENST00000557439 DUX5Q96PT3 197 aa13.27□□□□□ -0.29
XRCC3-218ENST00000557439 HIGD1BQ9P298 99 aa13.27□□□□□ -0.29
XRCC3-218ENST00000557439 F8VRH5 84 aa13.27□□□□□ -0.29
XRCC3-218ENST00000557439 DEFB112Q30KQ8 113 aa13.27□□□□□ -0.29
XRCC3-218ENST00000557439 CEND1Q8N111 149 aa13.27□□□□□ -0.29
XRCC3-218ENST00000557439 DUSP14O95147 198 aaKnown RBP13.26□□□□□ -0.29
XRCC3-218ENST00000557439 CFHR3Q02985 330 aa13.26□□□□□ -0.29
XRCC3-218ENST00000557439 DCANP1Q8TF63 244 aa13.26□□□□□ -0.29
XRCC3-218ENST00000557439 BAALCQ8WXS3 180 aa13.26□□□□□ -0.29
XRCC3-218ENST00000557439 H7C1H1 209 aa13.26□□□□□ -0.29
XRCC3-218ENST00000557439 CD7P09564 240 aa13.26□□□□□ -0.29
XRCC3-218ENST00000557439 ORMDL2Q53FV1 153 aa13.26□□□□□ -0.29
XRCC3-218ENST00000557439 NEXN-AS1Q8NBZ9 246 aa13.26□□□□□ -0.29
XRCC3-218ENST00000557439 H3BUA1 57 aa13.25□□□□□ -0.29
XRCC3-218ENST00000557439 LINC00315P59091 139 aa13.25□□□□□ -0.29
XRCC3-218ENST00000557439 PSMG4Q5JS54 123 aa13.25□□□□□ -0.29
XRCC3-218ENST00000557439 PHLDA1Q8WV24 401 aaPredicted RBP13.25□□□□□ -0.29
XRCC3-218ENST00000557439 FAM74A4Q5TZK3 123 aa13.25□□□□□ -0.29
XRCC3-218ENST00000557439 FAM159AQ6UWV7 190 aa13.25□□□□□ -0.29
XRCC3-218ENST00000557439 PRSS29PA6NIE9 313 aa13.24□□□□□ -0.29
XRCC3-218ENST00000557439 F5H697 171 aa13.24□□□□□ -0.29
XRCC3-218ENST00000557439 PLNP26678 52 aa13.24□□□□□ -0.29
XRCC3-218ENST00000557439 RPL39P62891 51 aaKnown RBP13.24□□□□□ -0.29
XRCC3-218ENST00000557439 APRG1Q8IVJ8 170 aa13.24□□□□□ -0.29
XRCC3-218ENST00000557439 KIF25-AS1Q9Y6Z4 181 aa13.24□□□□□ -0.29
XRCC3-218ENST00000557439 KLLNB2CW77 178 aa13.24□□□□□ -0.29
XRCC3-218ENST00000557439 FABP2P12104 132 aa13.24□□□□□ -0.29
XRCC3-218ENST00000557439 C20orf78Q9BR46 151 aa13.24□□□□□ -0.29
XRCC3-218ENST00000557439 NDUFS8O00217 210 aa13.23□□□□□ -0.29
XRCC3-218ENST00000557439 HLA-DRB4P13762 266 aa13.23□□□□□ -0.29
XRCC3-218ENST00000557439 HIST1H4GQ99525 98 aa13.23□□□□□ -0.29
XRCC3-218ENST00000557439 MDFICQ9P1T7 246 aa13.23□□□□□ -0.29
XRCC3-218ENST00000557439 HLA-DRB4X5D2U9 266 aa13.23□□□□□ -0.29
XRCC3-218ENST00000557439 RIPPLY3P57055 190 aa13.22□□□□□ -0.29
XRCC3-218ENST00000557439 SUMO4Q6EEV6 95 aa13.22□□□□□ -0.29
XRCC3-218ENST00000557439 TRAV12-1A0A0B4J245 112 aa13.22□□□□□ -0.29
XRCC3-218ENST00000557439 B4DSR2 109 aa13.22□□□□□ -0.29
XRCC3-218ENST00000557439 PSMB8P28062 276 aa13.22□□□□□ -0.29
XRCC3-218ENST00000557439 HIST2H2BDQ6DRA6 164 aa13.22□□□□□ -0.29
XRCC3-218ENST00000557439 TM2D2Q9BX73 214 aa13.22□□□□□ -0.29
XRCC3-218ENST00000557439 CYSLTR1Q9Y271 337 aa13.22□□□□□ -0.29
XRCC3-218ENST00000557439 OR11H12B2RN74 326 aa13.21□□□□□ -0.29
XRCC3-218ENST00000557439 TSHBP01222 138 aa13.21□□□□□ -0.29
XRCC3-218ENST00000557439 OR11H1Q8NG94 326 aa13.21□□□□□ -0.29
XRCC3-218ENST00000557439 OR11H2Q8NH07 326 aa13.21□□□□□ -0.29
XRCC3-218ENST00000557439 TP53TG1Q9Y2A0 90 aa13.21□□□□□ -0.29
XRCC3-218ENST00000557439 KLHL30-AS1Q8NEE0 82 aa13.21□□□□□ -0.3
XRCC3-218ENST00000557439 LRRK2Q5S007 2527 aa13.2□□□□□ -0.3
XRCC3-218ENST00000557439 BRI3O95415 125 aa13.2□□□□□ -0.3
XRCC3-218ENST00000557439 CRYGDP07320 174 aa13.2□□□□□ -0.3
XRCC3-218ENST00000557439 SYNJ2BPP57105 145 aa13.2□□□□□ -0.3
XRCC3-218ENST00000557439 SPINK13Q1W4C9 94 aa13.2□□□□□ -0.3
XRCC3-218ENST00000557439 CD300EQ496F6 205 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms