RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 VAX2Q9UIW0 290 aa5.48□□□□□ -1.53
PSEN1-222ENST00000557356 HUWE1Q7Z6Z7 4374 aaKnown RBP5.47□□□□□ -1.53
PSEN1-222ENST00000557356 IGKV3D-20A0A0C4DH25 116 aa5.47□□□□□ -1.53
PSEN1-222ENST00000557356 LOC105371267A0A1B0GV96 52 aa5.47□□□□□ -1.53
PSEN1-222ENST00000557356 K7EP13 123 aa5.47□□□□□ -1.53
PSEN1-222ENST00000557356 SH2D1AO60880 128 aa5.47□□□□□ -1.53
PSEN1-222ENST00000557356 IGHV3-53P01767 116 aa5.47□□□□□ -1.53
PSEN1-222ENST00000557356 MGST1P10620 155 aaKnown RBP5.47□□□□□ -1.53
PSEN1-222ENST00000557356 TTC32Q5I0X7 151 aa5.47□□□□□ -1.53
PSEN1-222ENST00000557356 C11orf52Q96A22 123 aa5.47□□□□□ -1.53
PSEN1-222ENST00000557356 ZC2HC1AQ96GY0 325 aa5.47□□□□□ -1.53
PSEN1-222ENST00000557356 PRADC1Q9BSG0 188 aa5.47□□□□□ -1.53
PSEN1-222ENST00000557356 UPK3BQ9BT76 320 aa5.47□□□□□ -1.53
PSEN1-222ENST00000557356 C11orf21Q9P2W6 132 aa5.47□□□□□ -1.53
PSEN1-222ENST00000557356 TMA7Q9Y2S6 64 aaKnown RBP5.47□□□□□ -1.53
PSEN1-222ENST00000557356 TRAV9-2A0A087WT02 112 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 A0A096LPF7 62 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 TRBV6-4A0A1B0GX49 114 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 SCO2A0A1W2PP80 73 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 A0A1W2PPQ1 181 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 XKRY2A2RUG3 117 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 RHODO00212 210 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 RS1O15537 224 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 CXCL1P09341 107 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 BCL2P10415 239 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 RNASE3P12724 160 aaKnown RBP5.46□□□□□ -1.54
PSEN1-222ENST00000557356 SRIP30626 198 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 RPL35P42766 123 aaKnown RBP5.46□□□□□ -1.54
PSEN1-222ENST00000557356 CRIP1P50238 77 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 CCL20P78556 96 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 C1orf134Q5TEV5 83 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 ZFP2Q6ZN57 461 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 ZNRF2Q8NHG8 242 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 VSIG2Q96IQ7 327 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 ZNF479Q96JC4 524 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 MLST8Q9BVC4 326 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 Q9H8V8 135 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 MRPS16Q9Y3D3 137 aaKnown RBP5.46□□□□□ -1.54
PSEN1-222ENST00000557356 LINC00588Q9Y4M8 146 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 PHLDA3Q9Y5J5 127 aa5.46□□□□□ -1.54
PSEN1-222ENST00000557356 PGPEP1LA6NFU8 196 aa5.45□□□□□ -1.54
PSEN1-222ENST00000557356 M0R036 132 aa5.45□□□□□ -1.54
PSEN1-222ENST00000557356 SFTA3P0C7M3 94 aa5.45□□□□□ -1.54
PSEN1-222ENST00000557356 ARMS2P0C7Q2 107 aa5.45□□□□□ -1.54
PSEN1-222ENST00000557356 MED14OSP0DP75 135 aa5.45□□□□□ -1.54
PSEN1-222ENST00000557356 GYPEP15421 78 aa5.45□□□□□ -1.54
PSEN1-222ENST00000557356 GNG4P50150 75 aa5.45□□□□□ -1.54
PSEN1-222ENST00000557356 RPS20P60866 119 aaKnown RBP5.45□□□□□ -1.54
PSEN1-222ENST00000557356 RHOHQ15669 191 aa5.45□□□□□ -1.54
PSEN1-222ENST00000557356 ESRGQ1W209 222 aa5.45□□□□□ -1.54
PSEN1-222ENST00000557356 C4orf48Q5BLP8 95 aa5.45□□□□□ -1.54
PSEN1-222ENST00000557356 ZNF506Q5JVG8 444 aa5.45□□□□□ -1.54
PSEN1-222ENST00000557356 LCE2AQ5TA79 106 aaPredicted RBP5.45□□□□□ -1.54
PSEN1-222ENST00000557356 CFAP126Q5VTH2 177 aa5.45□□□□□ -1.54
PSEN1-222ENST00000557356 Q6ZR54 194 aa5.45□□□□□ -1.54
PSEN1-222ENST00000557356 ZFP82Q8N141 532 aa5.45□□□□□ -1.54
PSEN1-222ENST00000557356 IGLV2-18A0A075B6J9 118 aa5.44□□□□□ -1.54
PSEN1-222ENST00000557356 NBDYA0A0U1RRE5 68 aa5.44□□□□□ -1.54
PSEN1-222ENST00000557356 TMEM218A2RU14 115 aa5.44□□□□□ -1.54
PSEN1-222ENST00000557356 TMEM250H0YL14 139 aa5.44□□□□□ -1.54
PSEN1-222ENST00000557356 K7EQD1 137 aa5.44□□□□□ -1.54
PSEN1-222ENST00000557356 M0R2N4 97 aa5.44□□□□□ -1.54
PSEN1-222ENST00000557356 NDUFS6O75380 124 aaKnown RBP5.44□□□□□ -1.54
PSEN1-222ENST00000557356 GATA1P15976 413 aaPredicted RBP5.44□□□□□ -1.54
PSEN1-222ENST00000557356 TIRAPP58753 221 aa5.44□□□□□ -1.54
PSEN1-222ENST00000557356 C10orf91Q5T1B1 145 aa5.44□□□□□ -1.54
PSEN1-222ENST00000557356 SVBPQ8N300 66 aa5.44□□□□□ -1.54
PSEN1-222ENST00000557356 CARHSP1Q9Y2V2 147 aaKnown RBP5.44□□□□□ -1.54
PSEN1-222ENST00000557356 RBFOX3A6NFN3 312 aa5.43□□□□□ -1.54
PSEN1-222ENST00000557356 F2Z2F3 143 aa5.43□□□□□ -1.54
PSEN1-222ENST00000557356 H3BVH4 76 aa5.43□□□□□ -1.54
PSEN1-222ENST00000557356 SIVA1O15304 175 aa5.43□□□□□ -1.54
PSEN1-222ENST00000557356 OR5AL1P0C617 328 aa5.43□□□□□ -1.54
PSEN1-222ENST00000557356 CENPWQ5EE01 88 aa5.43□□□□□ -1.54
PSEN1-222ENST00000557356 PRR27Q6MZM9 219 aa5.43□□□□□ -1.54
PSEN1-222ENST00000557356 LYPD5Q6UWN5 251 aa5.43□□□□□ -1.54
PSEN1-222ENST00000557356 SLC25A29Q8N8R3 303 aa5.43□□□□□ -1.54
PSEN1-222ENST00000557356 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.43□□□□□ -1.54
PSEN1-222ENST00000557356 NHLRC2Q8NBF2 726 aa5.43□□□□□ -1.54
PSEN1-222ENST00000557356 LYPD6BQ8NI32 183 aa5.43□□□□□ -1.54
PSEN1-222ENST00000557356 PARLQ9H300 379 aa5.43□□□□□ -1.54
PSEN1-222ENST00000557356 SCRT2Q9NQ03 307 aa5.43□□□□□ -1.54
PSEN1-222ENST00000557356 A0A087WWC5 75 aa5.42□□□□□ -1.54
PSEN1-222ENST00000557356 TRAV8-6A0A0B4J262 113 aa5.42□□□□□ -1.54
PSEN1-222ENST00000557356 GRIFINA4D1Z8 144 aa5.42□□□□□ -1.54
PSEN1-222ENST00000557356 SCO1O75880 301 aa5.42□□□□□ -1.54
PSEN1-222ENST00000557356 SNAPINO95295 136 aa5.42□□□□□ -1.54
PSEN1-222ENST00000557356 P01737 135 aa5.42□□□□□ -1.54
PSEN1-222ENST00000557356 APOC3P02656 99 aa5.42□□□□□ -1.54
PSEN1-222ENST00000557356 EVI2AP22794 236 aa5.42□□□□□ -1.54
PSEN1-222ENST00000557356 SPANXN1Q5VSR9 72 aa5.42□□□□□ -1.54
PSEN1-222ENST00000557356 C6orf223Q8N319 242 aa5.42□□□□□ -1.54
PSEN1-222ENST00000557356 CLRN3Q8NCR9 226 aa5.42□□□□□ -1.54
PSEN1-222ENST00000557356 SFRP2Q96HF1 295 aa5.42□□□□□ -1.54
PSEN1-222ENST00000557356 SSBP4Q9BWG4 385 aaPredicted RBP5.42□□□□□ -1.54
PSEN1-222ENST00000557356 SEC11CQ9BY50 192 aa5.42□□□□□ -1.54
PSEN1-222ENST00000557356 EIF5A2Q9GZV4 153 aaKnown RBP5.42□□□□□ -1.54
PSEN1-222ENST00000557356 SMDT1Q9H4I9 107 aa5.42□□□□□ -1.54
PSEN1-222ENST00000557356 MUC4Q99102 2169 aa5.41□□□□□ -1.54
PSEN1-222ENST00000557356 TMSB15BA0A087X1C1 80 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms