RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 SUMO2P61956 95 aaKnown RBP16.98■□□□□ 0.31
RCCD1-208ENST00000557266 USP9YO00507 2555 aaPredicted RBP16.98■□□□□ 0.31
RCCD1-208ENST00000557266 DEFB112Q30KQ8 113 aa16.97■□□□□ 0.31
RCCD1-208ENST00000557266 DCANP1Q8TF63 244 aa16.97■□□□□ 0.31
RCCD1-208ENST00000557266 TMEM160Q9NX00 188 aa16.97■□□□□ 0.31
RCCD1-208ENST00000557266 TENM4Q6N022 2769 aa16.97■□□□□ 0.31
RCCD1-208ENST00000557266 CSPG4Q6UVK1 2322 aa16.97■□□□□ 0.31
RCCD1-208ENST00000557266 C10orf99Q6UWK7 81 aa16.97■□□□□ 0.31
RCCD1-208ENST00000557266 C20orf78Q9BR46 151 aa16.97■□□□□ 0.31
RCCD1-208ENST00000557266 A0A087WX48 190 aa16.96■□□□□ 0.31
RCCD1-208ENST00000557266 KLLNB2CW77 178 aa16.96■□□□□ 0.31
RCCD1-208ENST00000557266 RNF223E7ERA6 249 aa16.96■□□□□ 0.31
RCCD1-208ENST00000557266 H3BRM9 83 aa16.96■□□□□ 0.31
RCCD1-208ENST00000557266 DSCR9P59020 149 aa16.96■□□□□ 0.31
RCCD1-208ENST00000557266 MGPP08493 103 aa16.95■□□□□ 0.3
RCCD1-208ENST00000557266 NXPH4O95158 308 aa16.94■□□□□ 0.3
RCCD1-208ENST00000557266 ORMDL2Q53FV1 153 aa16.94■□□□□ 0.3
RCCD1-208ENST00000557266 AP1S3Q96PC3 154 aa16.94■□□□□ 0.3
RCCD1-208ENST00000557266 FBN2P35556 2912 aa16.94■□□□□ 0.3
RCCD1-208ENST00000557266 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.94■□□□□ 0.3
RCCD1-208ENST00000557266 HIGD1BQ9P298 99 aa16.94■□□□□ 0.3
RCCD1-208ENST00000557266 A0A096LNT2 108 aa16.93■□□□□ 0.3
RCCD1-208ENST00000557266 C9orf118A6NHY6 69 aa16.93■□□□□ 0.3
RCCD1-208ENST00000557266 ID1P41134 155 aa16.93■□□□□ 0.3
RCCD1-208ENST00000557266 LINC01356Q8N9X3 169 aa16.93■□□□□ 0.3
RCCD1-208ENST00000557266 TOMM6Q96B49 74 aa16.93■□□□□ 0.3
RCCD1-208ENST00000557266 JMJD8Q96S16 334 aa16.93■□□□□ 0.3
RCCD1-208ENST00000557266 SLC25A16P16260 332 aa16.93■□□□□ 0.3
RCCD1-208ENST00000557266 WFDC12Q8WWY7 111 aa16.92■□□□□ 0.3
RCCD1-208ENST00000557266 HLA-DRB4P13762 266 aa16.91■□□□□ 0.3
RCCD1-208ENST00000557266 SAMD13Q5VXD3 122 aa16.91■□□□□ 0.3
RCCD1-208ENST00000557266 POM121L12Q8N7R1 296 aa16.91■□□□□ 0.3
RCCD1-208ENST00000557266 CHAC1Q9BUX1 264 aa16.91■□□□□ 0.3
RCCD1-208ENST00000557266 HLA-DRB4X5D2U9 266 aa16.91■□□□□ 0.3
RCCD1-208ENST00000557266 TRBV25-1A0A075B6N4 114 aa16.91■□□□□ 0.3
RCCD1-208ENST00000557266 TRAV12-1A0A0B4J245 112 aa16.91■□□□□ 0.3
RCCD1-208ENST00000557266 PLNP26678 52 aa16.91■□□□□ 0.3
RCCD1-208ENST00000557266 KIF25-AS1Q9Y6Z4 181 aa16.91■□□□□ 0.3
RCCD1-208ENST00000557266 K7EMI3 77 aa16.9■□□□□ 0.3
RCCD1-208ENST00000557266 LINC00315P59091 139 aa16.9■□□□□ 0.3
RCCD1-208ENST00000557266 SCGB3A1Q96QR1 104 aa16.9■□□□□ 0.3
RCCD1-208ENST00000557266 RBX1P62877 108 aa16.9■□□□□ 0.3
RCCD1-208ENST00000557266 NAA38Q9BRA0 125 aaKnown RBP16.9■□□□□ 0.3
RCCD1-208ENST00000557266 DOPEY2Q9Y3R5 2298 aa16.89■□□□□ 0.29
RCCD1-208ENST00000557266 H3BUT2 72 aa16.89■□□□□ 0.29
RCCD1-208ENST00000557266 FAM159AQ6UWV7 190 aa16.89■□□□□ 0.29
RCCD1-208ENST00000557266 MUC4Q99102 2169 aa16.89■□□□□ 0.29
RCCD1-208ENST00000557266 CENPEQ02224 2701 aa16.89■□□□□ 0.29
RCCD1-208ENST00000557266 F8VRH5 84 aa16.88■□□□□ 0.29
RCCD1-208ENST00000557266 H7C1H1 209 aa16.88■□□□□ 0.29
RCCD1-208ENST00000557266 MAPK1IP1LQ8NDC0 245 aa16.88■□□□□ 0.29
RCCD1-208ENST00000557266 CBY1Q9Y3M2 126 aa16.88■□□□□ 0.29
RCCD1-208ENST00000557266 ZNF688P0C7X2 276 aa16.88■□□□□ 0.29
RCCD1-208ENST00000557266 GCSHP23434 173 aa16.88■□□□□ 0.29
RCCD1-208ENST00000557266 FXYD2P54710 66 aa16.88■□□□□ 0.29
RCCD1-208ENST00000557266 MAPKAPK5-AS1Q8N8E1 139 aa16.88■□□□□ 0.29
RCCD1-208ENST00000557266 RAB37Q96AX2 223 aa16.88■□□□□ 0.29
RCCD1-208ENST00000557266 TMEM89A2RUT3 159 aa16.87■□□□□ 0.29
RCCD1-208ENST00000557266 C2orf66Q6UXQ4 117 aa16.87■□□□□ 0.29
RCCD1-208ENST00000557266 NEXN-AS1Q8NBZ9 246 aa16.87■□□□□ 0.29
RCCD1-208ENST00000557266 CSTL1Q9H114 145 aa16.87■□□□□ 0.29
RCCD1-208ENST00000557266 HELZ2Q9BYK8 2649 aaKnown RBP16.87■□□□□ 0.29
RCCD1-208ENST00000557266 TRAV12-3A0A0B4J271 114 aa16.87■□□□□ 0.29
RCCD1-208ENST00000557266 UFSP1Q6NVU6 142 aa16.87■□□□□ 0.29
RCCD1-208ENST00000557266 JPT2Q9H910 190 aa16.87■□□□□ 0.29
RCCD1-208ENST00000557266 ZANQ9Y493 2812 aa16.87■□□□□ 0.29
RCCD1-208ENST00000557266 GAGE10A6NGK3 116 aa16.86■□□□□ 0.29
RCCD1-208ENST00000557266 PPP1R17O96001 155 aa16.86■□□□□ 0.29
RCCD1-208ENST00000557266 TGFAP01135 160 aa16.86■□□□□ 0.29
RCCD1-208ENST00000557266 J3QLI3 93 aa16.85■□□□□ 0.29
RCCD1-208ENST00000557266 NEGR1Q7Z3B1 354 aa16.85■□□□□ 0.29
RCCD1-208ENST00000557266 CST9LQ9H4G1 147 aa16.85■□□□□ 0.29
RCCD1-208ENST00000557266 CHTOPQ9Y3Y2 248 aaKnown RBP16.85■□□□□ 0.29
RCCD1-208ENST00000557266 PTPN13Q12923 2485 aa16.85■□□□□ 0.29
RCCD1-208ENST00000557266 CD7P09564 240 aa16.85■□□□□ 0.29
RCCD1-208ENST00000557266 ANKRD17O75179 2603 aaKnown RBP16.84■□□□□ 0.29
RCCD1-208ENST00000557266 IGHV4OR15-8A0A075B7B6 117 aa16.84■□□□□ 0.29
RCCD1-208ENST00000557266 A0A087WW49 117 aa16.84■□□□□ 0.29
RCCD1-208ENST00000557266 GAGE12BA1L429 117 aa16.84■□□□□ 0.29
RCCD1-208ENST00000557266 BAALCQ8WXS3 180 aa16.84■□□□□ 0.29
RCCD1-208ENST00000557266 POLQO75417 2590 aa16.84■□□□□ 0.29
RCCD1-208ENST00000557266 A0A0J9YX75 114 aa16.84■□□□□ 0.29
RCCD1-208ENST00000557266 ODF3Q96PU9 254 aa16.84■□□□□ 0.29
RCCD1-208ENST00000557266 K7EP34 96 aa16.82■□□□□ 0.28
RCCD1-208ENST00000557266 K7EQG2 157 aa16.82■□□□□ 0.28
RCCD1-208ENST00000557266 SYNJ2BPP57105 145 aa16.82■□□□□ 0.28
RCCD1-208ENST00000557266 KRTAP10-9P60411 292 aa16.82■□□□□ 0.28
RCCD1-208ENST00000557266 SUMO4Q6EEV6 95 aa16.82■□□□□ 0.28
RCCD1-208ENST00000557266 A0A087WWL8 130 aa16.82■□□□□ 0.28
RCCD1-208ENST00000557266 IGKV3-20P01619 116 aa16.82■□□□□ 0.28
RCCD1-208ENST00000557266 SNRPD3P62318 126 aaKnown RBP16.82■□□□□ 0.28
RCCD1-208ENST00000557266 GTF2H5Q6ZYL4 71 aa16.82■□□□□ 0.28
RCCD1-208ENST00000557266 VPREB3Q9UKI3 123 aa16.82■□□□□ 0.28
RCCD1-208ENST00000557266 TRAV12-2A0A075B6T6 113 aa16.81■□□□□ 0.28
RCCD1-208ENST00000557266 A0A1W2PPM0 123 aa16.81■□□□□ 0.28
RCCD1-208ENST00000557266 SMIM13P0DJ93 91 aa16.81■□□□□ 0.28
RCCD1-208ENST00000557266 RPL32P62910 135 aaKnown RBP16.81■□□□□ 0.28
RCCD1-208ENST00000557266 CEND1Q8N111 149 aa16.81■□□□□ 0.28
RCCD1-208ENST00000557266 TM2D2Q9BX73 214 aa16.81■□□□□ 0.28
RCCD1-208ENST00000557266 NBPF19A0A087WUL8 3843 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms