RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 LELP1Q5T871 98 aa10.65□□□□□ -0.7
TUBB3-213ENST00000557262 CYB561D1Q8N8Q1 229 aa10.65□□□□□ -0.7
TUBB3-213ENST00000557262 TMEM75Q8N9X5 138 aa10.65□□□□□ -0.7
TUBB3-213ENST00000557262 ATP6V0E2Q8NHE4 81 aa10.65□□□□□ -0.7
TUBB3-213ENST00000557262 GTSF1LQ9H1H1 148 aa10.65□□□□□ -0.7
TUBB3-213ENST00000557262 MED28Q9H204 178 aa10.65□□□□□ -0.7
TUBB3-213ENST00000557262 IGLV5-52A0A0A0MRZ9 124 aa10.64□□□□□ -0.71
TUBB3-213ENST00000557262 GGTLC3B5MD39 225 aa10.64□□□□□ -0.71
TUBB3-213ENST00000557262 Q5VSD8 79 aa10.64□□□□□ -0.71
TUBB3-213ENST00000557262 NTN5Q8WTR8 489 aaPredicted RBP10.64□□□□□ -0.71
TUBB3-213ENST00000557262 VPS13BQ7Z7G8 4022 aa10.63□□□□□ -0.71
TUBB3-213ENST00000557262 A0A1W2PRE2 83 aa10.63□□□□□ -0.71
TUBB3-213ENST00000557262 IGHV3-30P01768 117 aa10.63□□□□□ -0.71
TUBB3-213ENST00000557262 IGHV3-33P01772 117 aa10.63□□□□□ -0.71
TUBB3-213ENST00000557262 IGHV3-30-3P0DP02 117 aa10.63□□□□□ -0.71
TUBB3-213ENST00000557262 IGHV3-30-5P0DP03 117 aa10.63□□□□□ -0.71
TUBB3-213ENST00000557262 Q5BKY6 102 aa10.63□□□□□ -0.71
TUBB3-213ENST00000557262 SH3BGRL3Q9H299 93 aa10.63□□□□□ -0.71
TUBB3-213ENST00000557262 Q9HAA7 133 aa10.63□□□□□ -0.71
TUBB3-213ENST00000557262 FABP5P3A8MUU1 101 aa10.62□□□□□ -0.71
TUBB3-213ENST00000557262 SMR3BP02814 79 aaPredicted RBP10.62□□□□□ -0.71
TUBB3-213ENST00000557262 ZFP2Q6ZN57 461 aa10.62□□□□□ -0.71
TUBB3-213ENST00000557262 LINC00479Q96M42 142 aa10.62□□□□□ -0.71
TUBB3-213ENST00000557262 TRAV34A0A0B4J273 112 aa10.61□□□□□ -0.71
TUBB3-213ENST00000557262 IGKV3D-20A0A0C4DH25 116 aa10.61□□□□□ -0.71
TUBB3-213ENST00000557262 A8MWV9 139 aa10.61□□□□□ -0.71
TUBB3-213ENST00000557262 S100A4P26447 101 aaKnown RBP10.61□□□□□ -0.71
TUBB3-213ENST00000557262 PIK3CD-AS1Q5SR53 167 aa10.61□□□□□ -0.71
TUBB3-213ENST00000557262 Q6ZSN1 163 aa10.61□□□□□ -0.71
TUBB3-213ENST00000557262 Q8N814 137 aa10.61□□□□□ -0.71
TUBB3-213ENST00000557262 INO80EQ8NBZ0 244 aaPredicted RBP10.61□□□□□ -0.71
TUBB3-213ENST00000557262 TMEM70Q9BUB7 260 aa10.61□□□□□ -0.71
TUBB3-213ENST00000557262 PARLQ9H300 379 aa10.61□□□□□ -0.71
TUBB3-213ENST00000557262 BORCS7-ASMTA0A0B4J1R7 106 aa10.6□□□□□ -0.71
TUBB3-213ENST00000557262 PTTG1O95997 202 aa10.6□□□□□ -0.71
TUBB3-213ENST00000557262 IFNA7P01567 189 aa10.6□□□□□ -0.71
TUBB3-213ENST00000557262 LAGE3Q14657 143 aa10.6□□□□□ -0.71
TUBB3-213ENST00000557262 LGALSLQ3ZCW2 172 aaPredicted RBP10.6□□□□□ -0.71
TUBB3-213ENST00000557262 RPL7L1Q6DKI1 246 aaKnown RBP10.6□□□□□ -0.71
TUBB3-213ENST00000557262 TM2D2Q9BX73 214 aa10.6□□□□□ -0.71
TUBB3-213ENST00000557262 BATF3Q9NR55 127 aa10.6□□□□□ -0.71
TUBB3-213ENST00000557262 ARL2-SNX15V9GYD0 113 aa10.6□□□□□ -0.71
TUBB3-213ENST00000557262 FAM229AH3BQW9 127 aa10.59□□□□□ -0.71
TUBB3-213ENST00000557262 GIPP09681 153 aaPredicted RBP10.59□□□□□ -0.71
TUBB3-213ENST00000557262 ASIPP42127 132 aa10.59□□□□□ -0.71
TUBB3-213ENST00000557262 ZNF726P1Q15940 193 aa10.59□□□□□ -0.71
TUBB3-213ENST00000557262 NKX6-2Q9C056 277 aaPredicted RBP10.59□□□□□ -0.71
TUBB3-213ENST00000557262 CTXND1A0A1B0GTU2 59 aa10.58□□□□□ -0.72
TUBB3-213ENST00000557262 GAGE12JA6NER3 117 aa10.58□□□□□ -0.72
TUBB3-213ENST00000557262 GAGE1Q13065 139 aa10.58□□□□□ -0.72
TUBB3-213ENST00000557262 GAGE4Q13068 117 aa10.58□□□□□ -0.72
TUBB3-213ENST00000557262 GAGE5Q13069 117 aa10.58□□□□□ -0.72
TUBB3-213ENST00000557262 GAGE13Q4V321 117 aa10.58□□□□□ -0.72
TUBB3-213ENST00000557262 OR2T35Q8NGX2 323 aa10.58□□□□□ -0.72
TUBB3-213ENST00000557262 IL36BQ9NZH7 164 aa10.58□□□□□ -0.72
TUBB3-213ENST00000557262 RNF222A6NCQ9 220 aa10.57□□□□□ -0.72
TUBB3-213ENST00000557262 FGF8P55075 233 aaPredicted RBP10.57□□□□□ -0.72
TUBB3-213ENST00000557262 UBE2G2P60604 165 aa10.57□□□□□ -0.72
TUBB3-213ENST00000557262 HIST1H2BAQ96A08 127 aa10.57□□□□□ -0.72
TUBB3-213ENST00000557262 JPT2Q9H910 190 aa10.57□□□□□ -0.72
TUBB3-213ENST00000557262 DMBT1Q9UGM3 2413 aaPredicted RBP10.56□□□□□ -0.72
TUBB3-213ENST00000557262 A0A087WWC5 75 aa10.56□□□□□ -0.72
TUBB3-213ENST00000557262 FXYD6-FXYD2A0A087WZ82 144 aa10.56□□□□□ -0.72
TUBB3-213ENST00000557262 TRAV8-3A0A0A6YYJ7 113 aa10.56□□□□□ -0.72
TUBB3-213ENST00000557262 B4DEV8 164 aa10.56□□□□□ -0.72
TUBB3-213ENST00000557262 PEX7O00628 323 aa10.56□□□□□ -0.72
TUBB3-213ENST00000557262 LINC00694P0DN24 101 aa10.56□□□□□ -0.72
TUBB3-213ENST00000557262 HAMPP81172 84 aa10.56□□□□□ -0.72
TUBB3-213ENST00000557262 DNLZQ5SXM8 178 aa10.56□□□□□ -0.72
TUBB3-213ENST00000557262 DMRTA1Q5VZB9 504 aa10.56□□□□□ -0.72
TUBB3-213ENST00000557262 UFSP1Q6NVU6 142 aa10.56□□□□□ -0.72
TUBB3-213ENST00000557262 SAMD10Q9BYL1 202 aa10.56□□□□□ -0.72
TUBB3-213ENST00000557262 Q9UF83 564 aa10.56□□□□□ -0.72
TUBB3-213ENST00000557262 ZFP30Q9Y2G7 519 aa10.56□□□□□ -0.72
TUBB3-213ENST00000557262 FAM74A7A6NL05 159 aa10.55□□□□□ -0.72
TUBB3-213ENST00000557262 KRBOX1C9JBD0 128 aa10.55□□□□□ -0.72
TUBB3-213ENST00000557262 C1QBP02746 253 aa10.55□□□□□ -0.72
TUBB3-213ENST00000557262 ARMS2P0C7Q2 107 aa10.55□□□□□ -0.72
TUBB3-213ENST00000557262 CRIP1P50238 77 aa10.55□□□□□ -0.72
TUBB3-213ENST00000557262 TOR2AQ5JU69 321 aa10.55□□□□□ -0.72
TUBB3-213ENST00000557262 AKR1C8PQ5T2L2 129 aa10.55□□□□□ -0.72
TUBB3-213ENST00000557262 COX8CQ7Z4L0 72 aa10.55□□□□□ -0.72
TUBB3-213ENST00000557262 Q86TA4 180 aa10.55□□□□□ -0.72
TUBB3-213ENST00000557262 Q8N3U1 123 aa10.55□□□□□ -0.72
TUBB3-213ENST00000557262 SYT8Q8NBV8 401 aa10.55□□□□□ -0.72
TUBB3-213ENST00000557262 FAM30AQ9NZY2 134 aa10.55□□□□□ -0.72
TUBB3-213ENST00000557262 MYCBP2O75592 4640 aa10.54□□□□□ -0.72
TUBB3-213ENST00000557262 H3BVH4 76 aa10.54□□□□□ -0.72
TUBB3-213ENST00000557262 DAZ4Q86SG3 579 aaKnown RBP10.54□□□□□ -0.72
TUBB3-213ENST00000557262 C14orf178Q8N769 122 aaPredicted RBP10.54□□□□□ -0.72
TUBB3-213ENST00000557262 ZC2HC1AQ96GY0 325 aa10.54□□□□□ -0.72
TUBB3-213ENST00000557262 DAZ3Q9NR90 486 aaKnown RBP10.54□□□□□ -0.72
TUBB3-213ENST00000557262 SRRM2Q9UQ35 2752 aaKnown RBP10.54□□□□□ -0.72
TUBB3-213ENST00000557262 RHODO00212 210 aa10.53□□□□□ -0.72
TUBB3-213ENST00000557262 OR11H4Q8NGC9 324 aa10.53□□□□□ -0.72
TUBB3-213ENST00000557262 FLG2Q5D862 2391 aaPredicted RBP10.52□□□□□ -0.73
TUBB3-213ENST00000557262 GRIFINA4D1Z8 144 aa10.52□□□□□ -0.73
TUBB3-213ENST00000557262 M0R036 132 aa10.52□□□□□ -0.73
TUBB3-213ENST00000557262 SH2D1AO60880 128 aa10.52□□□□□ -0.73
TUBB3-213ENST00000557262 UBE2G1P62253 170 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms