RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 C21orf62-AS1Q17RA5 79 aa14.46□□□□□ -0.09
FOXN3-214ENST00000557258 NEGR1Q7Z3B1 354 aa14.46□□□□□ -0.09
FOXN3-214ENST00000557258 NOTCH3Q9UM47 2321 aa14.46□□□□□ -0.09
FOXN3-214ENST00000557258 CD5LO43866 347 aa14.45□□□□□ -0.1
FOXN3-214ENST00000557258 RNASE3P12724 160 aaKnown RBP14.45□□□□□ -0.1
FOXN3-214ENST00000557258 ZNF702PQ9H963 129 aa14.45□□□□□ -0.1
FOXN3-214ENST00000557258 NXT2Q9NPJ8 142 aaKnown RBP14.45□□□□□ -0.1
FOXN3-214ENST00000557258 PPP1R14DQ9NXH3 145 aa14.45□□□□□ -0.1
FOXN3-214ENST00000557258 IGLV2-18A0A075B6J9 118 aa14.45□□□□□ -0.1
FOXN3-214ENST00000557258 FCER1GP30273 86 aa14.45□□□□□ -0.1
FOXN3-214ENST00000557258 KHDC1LQ5JSQ8 128 aa14.45□□□□□ -0.1
FOXN3-214ENST00000557258 PCP2Q8IVA1 136 aa14.45□□□□□ -0.1
FOXN3-214ENST00000557258 FOXC2Q99958 501 aa14.45□□□□□ -0.1
FOXN3-214ENST00000557258 DEFB113Q30KQ7 82 aa14.44□□□□□ -0.1
FOXN3-214ENST00000557258 HOXD3P31249 432 aaPredicted RBP14.44□□□□□ -0.1
FOXN3-214ENST00000557258 LGALS9BQ3B8N2 356 aa14.44□□□□□ -0.1
FOXN3-214ENST00000557258 LGALS9CQ6DKI2 356 aa14.44□□□□□ -0.1
FOXN3-214ENST00000557258 Q8N8P6 123 aa14.44□□□□□ -0.1
FOXN3-214ENST00000557258 FAM19A4Q96LR4 140 aa14.44□□□□□ -0.1
FOXN3-214ENST00000557258 LENEPQ9Y5L5 61 aa14.44□□□□□ -0.1
FOXN3-214ENST00000557258 C7orf71A4D174 169 aa14.43□□□□□ -0.1
FOXN3-214ENST00000557258 SMIM17P0DL12 118 aa14.43□□□□□ -0.1
FOXN3-214ENST00000557258 Q6YL49 198 aa14.43□□□□□ -0.1
FOXN3-214ENST00000557258 C2orf91Q6ZV80 131 aa14.43□□□□□ -0.1
FOXN3-214ENST00000557258 A0A087WWL8 130 aa14.43□□□□□ -0.1
FOXN3-214ENST00000557258 COX8AP10176 69 aa14.43□□□□□ -0.1
FOXN3-214ENST00000557258 SLURP1P55000 103 aa14.43□□□□□ -0.1
FOXN3-214ENST00000557258 J3QLI3 93 aa14.42□□□□□ -0.1
FOXN3-214ENST00000557258 CD7P09564 240 aa14.42□□□□□ -0.1
FOXN3-214ENST00000557258 SPINK13Q1W4C9 94 aa14.42□□□□□ -0.1
FOXN3-214ENST00000557258 BVES-AS1Q5T3Y7 98 aa14.42□□□□□ -0.1
FOXN3-214ENST00000557258 C11orf44Q8N8P7 122 aa14.41□□□□□ -0.1
FOXN3-214ENST00000557258 RASL10AQ92737 203 aa14.41□□□□□ -0.1
FOXN3-214ENST00000557258 HTN1P15515 57 aa14.41□□□□□ -0.1
FOXN3-214ENST00000557258 ID1P41134 155 aa14.41□□□□□ -0.1
FOXN3-214ENST00000557258 FAM159AQ6UWV7 190 aa14.41□□□□□ -0.1
FOXN3-214ENST00000557258 IGHV4-4A0A075B6R2 117 aa14.4□□□□□ -0.1
FOXN3-214ENST00000557258 CBY3A6NI87 242 aa14.4□□□□□ -0.1
FOXN3-214ENST00000557258 K7EMT4 169 aa14.4□□□□□ -0.1
FOXN3-214ENST00000557258 LAGE3Q14657 143 aa14.4□□□□□ -0.1
FOXN3-214ENST00000557258 ODF1Q14990 250 aa14.4□□□□□ -0.1
FOXN3-214ENST00000557258 IGKV2D-26A0A0A0MRZ7 120 aa14.4□□□□□ -0.1
FOXN3-214ENST00000557258 FGF6P10767 208 aa14.4□□□□□ -0.1
FOXN3-214ENST00000557258 JMJD1CQ15652 2540 aa14.4□□□□□ -0.1
FOXN3-214ENST00000557258 FAM74A4Q5TZK3 123 aa14.39□□□□□ -0.11
FOXN3-214ENST00000557258 DPF1Q92782 380 aa14.39□□□□□ -0.11
FOXN3-214ENST00000557258 TMEM160Q9NX00 188 aa14.39□□□□□ -0.11
FOXN3-214ENST00000557258 PRM2P04554 102 aa14.39□□□□□ -0.11
FOXN3-214ENST00000557258 LGALS1P09382 135 aaKnown RBP14.39□□□□□ -0.11
FOXN3-214ENST00000557258 GTSCR1Q86UQ5 136 aa14.39□□□□□ -0.11
FOXN3-214ENST00000557258 WFDC11Q8NEX6 87 aa14.39□□□□□ -0.11
FOXN3-214ENST00000557258 MDFICQ9P1T7 246 aa14.38□□□□□ -0.11
FOXN3-214ENST00000557258 NOTCH2Q04721 2471 aa14.38□□□□□ -0.11
FOXN3-214ENST00000557258 KLLNB2CW77 178 aa14.38□□□□□ -0.11
FOXN3-214ENST00000557258 DPH3P1Q9H4G8 78 aa14.38□□□□□ -0.11
FOXN3-214ENST00000557258 FSHBP01225 129 aa14.38□□□□□ -0.11
FOXN3-214ENST00000557258 SMIM2Q9BVW6 85 aa14.38□□□□□ -0.11
FOXN3-214ENST00000557258 COX11Q9Y6N1 276 aa14.38□□□□□ -0.11
FOXN3-214ENST00000557258 SUMO2P61956 95 aaKnown RBP14.37□□□□□ -0.11
FOXN3-214ENST00000557258 MRPL35Q9NZE8 188 aaKnown RBP14.37□□□□□ -0.11
FOXN3-214ENST00000557258 SNRPD3P62318 126 aaKnown RBP14.37□□□□□ -0.11
FOXN3-214ENST00000557258 ADAMTSL5Q6ZMM2 481 aa14.37□□□□□ -0.11
FOXN3-214ENST00000557258 F5H697 171 aa14.36□□□□□ -0.11
FOXN3-214ENST00000557258 TCTEX1D4Q5JR98 221 aa14.36□□□□□ -0.11
FOXN3-214ENST00000557258 LINC01546A6NGU7 62 aa14.36□□□□□ -0.11
FOXN3-214ENST00000557258 KNCNA6PVL3 124 aa14.36□□□□□ -0.11
FOXN3-214ENST00000557258 A0A0J9YX75 114 aa14.35□□□□□ -0.11
FOXN3-214ENST00000557258 KRTAP1-3Q8IUG1 177 aa14.35□□□□□ -0.11
FOXN3-214ENST00000557258 AP1S3Q96PC3 154 aa14.35□□□□□ -0.11
FOXN3-214ENST00000557258 ZNF580Q9UK33 172 aa14.35□□□□□ -0.11
FOXN3-214ENST00000557258 CBY1Q9Y3M2 126 aa14.35□□□□□ -0.11
FOXN3-214ENST00000557258 K7EQG2 157 aa14.35□□□□□ -0.11
FOXN3-214ENST00000557258 CCL25O15444 150 aa14.35□□□□□ -0.11
FOXN3-214ENST00000557258 APRG1Q8IVJ8 170 aa14.35□□□□□ -0.11
FOXN3-214ENST00000557258 MYOZ3Q8TDC0 251 aa14.35□□□□□ -0.11
FOXN3-214ENST00000557258 MRAP2Q96G30 205 aa14.35□□□□□ -0.11
FOXN3-214ENST00000557258 NAA38Q9BRA0 125 aaKnown RBP14.35□□□□□ -0.11
FOXN3-214ENST00000557258 HHLA3Q9XRX5 114 aa14.35□□□□□ -0.11
FOXN3-214ENST00000557258 GAGE1Q13065 139 aa14.34□□□□□ -0.11
FOXN3-214ENST00000557258 ZC2HC1BQ5TFG8 222 aa14.34□□□□□ -0.11
FOXN3-214ENST00000557258 TAX1BP3O14907 124 aa14.34□□□□□ -0.11
FOXN3-214ENST00000557258 Q8N1Y9 231 aa14.34□□□□□ -0.11
FOXN3-214ENST00000557258 OR11H1Q8NG94 326 aa14.34□□□□□ -0.11
FOXN3-214ENST00000557258 PDZD2O15018 2839 aa14.33□□□□□ -0.11
FOXN3-214ENST00000557258 HECTD1Q9ULT8 2610 aa14.33□□□□□ -0.12
FOXN3-214ENST00000557258 IGKCP01834 107 aa14.33□□□□□ -0.12
FOXN3-214ENST00000557258 PCP4P48539 62 aa14.33□□□□□ -0.12
FOXN3-214ENST00000557258 UBE2E2Q96LR5 201 aa14.33□□□□□ -0.12
FOXN3-214ENST00000557258 CSTL1Q9H114 145 aa14.33□□□□□ -0.12
FOXN3-214ENST00000557258 K7EMI3 77 aa14.33□□□□□ -0.12
FOXN3-214ENST00000557258 C12orf54Q6X4T0 127 aa14.33□□□□□ -0.12
FOXN3-214ENST00000557258 K7EP13 123 aa14.32□□□□□ -0.12
FOXN3-214ENST00000557258 ELANEP08246 267 aa14.32□□□□□ -0.12
FOXN3-214ENST00000557258 PTTG1IPP53801 180 aa14.32□□□□□ -0.12
FOXN3-214ENST00000557258 VAMP3Q15836 100 aa14.32□□□□□ -0.12
FOXN3-214ENST00000557258 BOD1L2Q8IYS8 172 aa14.32□□□□□ -0.12
FOXN3-214ENST00000557258 FASNP49327 2511 aaKnown RBP14.32□□□□□ -0.12
FOXN3-214ENST00000557258 A0A1W2PRX2 142 aa14.32□□□□□ -0.12
FOXN3-214ENST00000557258 UNC79Q9P2D8 2635 aa14.31□□□□□ -0.12
FOXN3-214ENST00000557258 TMEM97Q5BJF2 176 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms