RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 SDF2L1Q9HCN8 221 aa9.64□□□□□ -0.87
VRTN-202ENST00000557177 RPH3ALQ9UNE2 315 aa9.64□□□□□ -0.87
VRTN-202ENST00000557177 TRAV8-1A0A0A6YYK1 113 aa9.63□□□□□ -0.87
VRTN-202ENST00000557177 FBLL1A6NHQ2 334 aaKnown RBP9.63□□□□□ -0.87
VRTN-202ENST00000557177 SULT1A2P50226 295 aa9.63□□□□□ -0.87
VRTN-202ENST00000557177 FAM74A1Q5RGS3 127 aa9.63□□□□□ -0.87
VRTN-202ENST00000557177 Q6ZSN1 163 aa9.63□□□□□ -0.87
VRTN-202ENST00000557177 SLC25A29Q8N8R3 303 aa9.63□□□□□ -0.87
VRTN-202ENST00000557177 KCNS1Q96KK3 526 aa9.63□□□□□ -0.87
VRTN-202ENST00000557177 TREM1Q9NP99 234 aa9.63□□□□□ -0.87
VRTN-202ENST00000557177 PFN1P07737 140 aaKnown RBP9.62□□□□□ -0.87
VRTN-202ENST00000557177 PQLC2Q6ZP29 291 aa9.62□□□□□ -0.87
VRTN-202ENST00000557177 SCGB1C1Q8TD33 95 aa9.62□□□□□ -0.87
VRTN-202ENST00000557177 TRAV8-6A0A0B4J262 113 aa9.61□□□□□ -0.87
VRTN-202ENST00000557177 TRBV6-4A0A1B0GX49 114 aa9.61□□□□□ -0.87
VRTN-202ENST00000557177 RS1O15537 224 aa9.61□□□□□ -0.87
VRTN-202ENST00000557177 CIDEAO60543 219 aa9.61□□□□□ -0.87
VRTN-202ENST00000557177 GNG5P63218 68 aa9.61□□□□□ -0.87
VRTN-202ENST00000557177 BLOC1S1P78537 153 aa9.61□□□□□ -0.87
VRTN-202ENST00000557177 RHOHQ15669 191 aa9.61□□□□□ -0.87
VRTN-202ENST00000557177 ZNF876PQ49A33 203 aa9.61□□□□□ -0.87
VRTN-202ENST00000557177 OR10J3Q5JRS4 329 aa9.61□□□□□ -0.87
VRTN-202ENST00000557177 CFAP126Q5VTH2 177 aa9.61□□□□□ -0.87
VRTN-202ENST00000557177 DPPA3Q6W0C5 159 aa9.61□□□□□ -0.87
VRTN-202ENST00000557177 COMMD7Q86VX2 200 aa9.61□□□□□ -0.87
VRTN-202ENST00000557177 SMIM3Q9BZL3 60 aa9.61□□□□□ -0.87
VRTN-202ENST00000557177 Q9HAA7 133 aa9.61□□□□□ -0.87
VRTN-202ENST00000557177 FAM30AQ9NZY2 134 aa9.61□□□□□ -0.87
VRTN-202ENST00000557177 UMAD1C9J7I0 102 aa9.6□□□□□ -0.87
VRTN-202ENST00000557177 ACOT6Q3I5F7 207 aaPredicted RBP9.6□□□□□ -0.87
VRTN-202ENST00000557177 LELP1Q5T871 98 aa9.6□□□□□ -0.87
VRTN-202ENST00000557177 PRADC1Q9BSG0 188 aa9.6□□□□□ -0.87
VRTN-202ENST00000557177 C11orf21Q9P2W6 132 aa9.6□□□□□ -0.87
VRTN-202ENST00000557177 RAB19A4D1S5 217 aa9.59□□□□□ -0.87
VRTN-202ENST00000557177 IGHV3-30P01768 117 aa9.59□□□□□ -0.87
VRTN-202ENST00000557177 IGHV3-33P01772 117 aa9.59□□□□□ -0.87
VRTN-202ENST00000557177 IGHV3-30-3P0DP02 117 aa9.59□□□□□ -0.87
VRTN-202ENST00000557177 IGHV3-30-5P0DP03 117 aa9.59□□□□□ -0.87
VRTN-202ENST00000557177 ZNF80P51504 273 aaPredicted RBP9.59□□□□□ -0.87
VRTN-202ENST00000557177 LAGE3Q14657 143 aa9.59□□□□□ -0.87
VRTN-202ENST00000557177 LYPD6BQ8NI32 183 aa9.59□□□□□ -0.87
VRTN-202ENST00000557177 C9orf85Q96MD7 179 aa9.59□□□□□ -0.87
VRTN-202ENST00000557177 PSMG3Q9BT73 122 aaPredicted RBP9.59□□□□□ -0.87
VRTN-202ENST00000557177 SERTM2A0A1B0GWG4 89 aa9.58□□□□□ -0.88
VRTN-202ENST00000557177 A0A1W2PPV4 95 aa9.58□□□□□ -0.88
VRTN-202ENST00000557177 RAB2AP61019 212 aa9.58□□□□□ -0.88
VRTN-202ENST00000557177 UQCC3Q6UW78 93 aa9.58□□□□□ -0.88
VRTN-202ENST00000557177 PTH2Q96A98 100 aa9.58□□□□□ -0.88
VRTN-202ENST00000557177 SGK494Q96LW2 274 aa9.58□□□□□ -0.88
VRTN-202ENST00000557177 GTSF1LQ9H1H1 148 aa9.58□□□□□ -0.88
VRTN-202ENST00000557177 IGHV3-73A0A0B4J1V6 119 aa9.57□□□□□ -0.88
VRTN-202ENST00000557177 HMGB3O15347 200 aaKnown RBP9.57□□□□□ -0.88
VRTN-202ENST00000557177 ARL14EPLP0DKL9 152 aa9.57□□□□□ -0.88
VRTN-202ENST00000557177 MGST1P10620 155 aaKnown RBP9.57□□□□□ -0.88
VRTN-202ENST00000557177 ATP6V0CP27449 155 aa9.57□□□□□ -0.88
VRTN-202ENST00000557177 SERF2P84101 59 aa9.57□□□□□ -0.88
VRTN-202ENST00000557177 WFDC2Q14508 124 aa9.57□□□□□ -0.88
VRTN-202ENST00000557177 ZNF506Q5JVG8 444 aa9.57□□□□□ -0.88
VRTN-202ENST00000557177 Q6ZSA8 131 aa9.57□□□□□ -0.88
VRTN-202ENST00000557177 NDFIP1Q9BT67 221 aa9.57□□□□□ -0.88
VRTN-202ENST00000557177 PGPEP1LA6NFU8 196 aa9.56□□□□□ -0.88
VRTN-202ENST00000557177 GCGP01275 180 aa9.56□□□□□ -0.88
VRTN-202ENST00000557177 IGLV2-11P01706 119 aa9.56□□□□□ -0.88
VRTN-202ENST00000557177 TCRAP04437 139 aa9.56□□□□□ -0.88
VRTN-202ENST00000557177 RNASE3P12724 160 aaKnown RBP9.56□□□□□ -0.88
VRTN-202ENST00000557177 Q8N3U1 123 aa9.56□□□□□ -0.88
VRTN-202ENST00000557177 TMEM75Q8N9X5 138 aa9.56□□□□□ -0.88
VRTN-202ENST00000557177 C5orf17Q8NAS9 161 aa9.56□□□□□ -0.88
VRTN-202ENST00000557177 HSD17B11Q8NBQ5 300 aa9.56□□□□□ -0.88
VRTN-202ENST00000557177 OR10G9Q8NGN4 311 aa9.56□□□□□ -0.88
VRTN-202ENST00000557177 OR10G7Q8NGN6 311 aa9.56□□□□□ -0.88
VRTN-202ENST00000557177 OR2G3Q8NGZ4 309 aa9.56□□□□□ -0.88
VRTN-202ENST00000557177 ATP6V0E2Q8NHE4 81 aa9.56□□□□□ -0.88
VRTN-202ENST00000557177 SUN5Q8TC36 379 aa9.56□□□□□ -0.88
VRTN-202ENST00000557177 TEX46H3BTG2 121 aa9.55□□□□□ -0.88
VRTN-202ENST00000557177 STAG3L2P0CL84 134 aa9.55□□□□□ -0.88
VRTN-202ENST00000557177 STAG3L3P0CL85 134 aa9.55□□□□□ -0.88
VRTN-202ENST00000557177 LINC00694P0DN24 101 aa9.55□□□□□ -0.88
VRTN-202ENST00000557177 TM2D2Q9BX73 214 aa9.55□□□□□ -0.88
VRTN-202ENST00000557177 PSG8Q9UQ74 426 aa9.55□□□□□ -0.88
VRTN-202ENST00000557177 KRBOX1C9JBD0 128 aa9.54□□□□□ -0.88
VRTN-202ENST00000557177 CDC34P49427 236 aaPredicted RBP9.54□□□□□ -0.88
VRTN-202ENST00000557177 SH3BGRL3Q9H299 93 aa9.54□□□□□ -0.88
VRTN-202ENST00000557177 TRAV1-1A0A0B4J248 108 aa9.53□□□□□ -0.88
VRTN-202ENST00000557177 GGTLC3B5MD39 225 aa9.53□□□□□ -0.88
VRTN-202ENST00000557177 J3QL48 77 aa9.53□□□□□ -0.88
VRTN-202ENST00000557177 K7EQM0 130 aa9.53□□□□□ -0.88
VRTN-202ENST00000557177 SMUG1Q53HV7 270 aa9.53□□□□□ -0.88
VRTN-202ENST00000557177 AKR1C8PQ5T2L2 129 aa9.53□□□□□ -0.88
VRTN-202ENST00000557177 ZFP2Q6ZN57 461 aa9.53□□□□□ -0.88
VRTN-202ENST00000557177 PARLQ9H300 379 aa9.53□□□□□ -0.88
VRTN-202ENST00000557177 LRP1Q07954 4544 aaKnown RBP9.52□□□□□ -0.89
VRTN-202ENST00000557177 TRAV8-3A0A0A6YYJ7 113 aa9.52□□□□□ -0.89
VRTN-202ENST00000557177 MBP02144 154 aa9.52□□□□□ -0.89
VRTN-202ENST00000557177 PLA2G1BP04054 148 aaKnown RBP9.52□□□□□ -0.89
VRTN-202ENST00000557177 GCHFRP30047 84 aa9.52□□□□□ -0.89
VRTN-202ENST00000557177 FLI1Q01543 452 aaPredicted RBP9.52□□□□□ -0.89
VRTN-202ENST00000557177 TOR2AQ5JU69 321 aa9.52□□□□□ -0.89
VRTN-202ENST00000557177 PIK3CD-AS1Q5SR53 167 aa9.52□□□□□ -0.89
VRTN-202ENST00000557177 RAB24Q969Q5 203 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms