RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 WFDC10BQ8IUB3 73 aa15.4■□□□□ 0.06
TMEM260-214ENST00000556975 SLC25A29Q8N8R3 303 aa15.4■□□□□ 0.06
TMEM260-214ENST00000556975 FHITP49789 147 aa15.39■□□□□ 0.05
TMEM260-214ENST00000556975 PIK3CD-AS1Q5SR53 167 aa15.39■□□□□ 0.05
TMEM260-214ENST00000556975 Q86TA4 180 aa15.39■□□□□ 0.05
TMEM260-214ENST00000556975 KRTAP4-5Q9BYR2 181 aa15.39■□□□□ 0.05
TMEM260-214ENST00000556975 ZFP30Q9Y2G7 519 aa15.39■□□□□ 0.05
TMEM260-214ENST00000556975 HMSDA8MTL9 139 aa15.38■□□□□ 0.05
TMEM260-214ENST00000556975 EVI2AP22794 236 aa15.38■□□□□ 0.05
TMEM260-214ENST00000556975 KRTAP10-2P60368 255 aa15.38■□□□□ 0.05
TMEM260-214ENST00000556975 STOML3Q8TAV4 291 aa15.38■□□□□ 0.05
TMEM260-214ENST00000556975 TCEAL7Q9BRU2 100 aa15.38■□□□□ 0.05
TMEM260-214ENST00000556975 PRADC1Q9BSG0 188 aa15.38■□□□□ 0.05
TMEM260-214ENST00000556975 TNFRSF18Q9Y5U5 241 aa15.38■□□□□ 0.05
TMEM260-214ENST00000556975 RHOHQ15669 191 aa15.37■□□□□ 0.05
TMEM260-214ENST00000556975 NHLRC2Q8NBF2 726 aa15.37■□□□□ 0.05
TMEM260-214ENST00000556975 DNAH5Q8TE73 4624 aa15.36■□□□□ 0.05
TMEM260-214ENST00000556975 TRBV6-1A0A0K0K1D8 114 aa15.36■□□□□ 0.05
TMEM260-214ENST00000556975 SEC11BP0C7V7 166 aa15.36■□□□□ 0.05
TMEM260-214ENST00000556975 MGST1P10620 155 aaKnown RBP15.36■□□□□ 0.05
TMEM260-214ENST00000556975 CRIP1P50238 77 aa15.36■□□□□ 0.05
TMEM260-214ENST00000556975 OR11H4Q8NGC9 324 aa15.36■□□□□ 0.05
TMEM260-214ENST00000556975 FMC1Q96HJ9 113 aa15.36■□□□□ 0.05
TMEM260-214ENST00000556975 IL36BQ9NZH7 164 aa15.36■□□□□ 0.05
TMEM260-214ENST00000556975 S100A4P26447 101 aaKnown RBP15.35■□□□□ 0.05
TMEM260-214ENST00000556975 DNLZQ5SXM8 178 aa15.35■□□□□ 0.05
TMEM260-214ENST00000556975 BOLA1Q9Y3E2 137 aa15.35■□□□□ 0.05
TMEM260-214ENST00000556975 IGHV3-73A0A0B4J1V6 119 aa15.34■□□□□ 0.05
TMEM260-214ENST00000556975 A0A0D9SG52 128 aa15.34■□□□□ 0.05
TMEM260-214ENST00000556975 A8MWV9 139 aa15.34■□□□□ 0.05
TMEM260-214ENST00000556975 UMAD1C9J7I0 102 aa15.34■□□□□ 0.05
TMEM260-214ENST00000556975 ASIPP42127 132 aa15.34■□□□□ 0.05
TMEM260-214ENST00000556975 ZFP2Q6ZN57 461 aa15.34■□□□□ 0.05
TMEM260-214ENST00000556975 C10orf126Q8N4M7 172 aa15.34■□□□□ 0.05
TMEM260-214ENST00000556975 MBD3L1Q8WWY6 194 aa15.34■□□□□ 0.05
TMEM260-214ENST00000556975 ZC2HC1AQ96GY0 325 aa15.34■□□□□ 0.05
TMEM260-214ENST00000556975 MSRB1Q9NZV6 116 aa15.34■□□□□ 0.05
TMEM260-214ENST00000556975 B4DEV8 164 aa15.33■□□□□ 0.04
TMEM260-214ENST00000556975 PARLQ9H300 379 aa15.33■□□□□ 0.04
TMEM260-214ENST00000556975 PGPEP1Q9NXJ5 209 aa15.33■□□□□ 0.04
TMEM260-214ENST00000556975 APOBP04114 4563 aaKnown RBP15.33■□□□□ 0.04
TMEM260-214ENST00000556975 IGHV3-38A0A0C4DH36 116 aa15.32■□□□□ 0.04
TMEM260-214ENST00000556975 KRBOX1C9JBD0 128 aa15.32■□□□□ 0.04
TMEM260-214ENST00000556975 ERVFC1-1P60608 527 aa15.32■□□□□ 0.04
TMEM260-214ENST00000556975 UBE2G1P62253 170 aa15.32■□□□□ 0.04
TMEM260-214ENST00000556975 CST9LP1Q5W188 147 aa15.32■□□□□ 0.04
TMEM260-214ENST00000556975 EREGO14944 169 aa15.31■□□□□ 0.04
TMEM260-214ENST00000556975 LTAP01374 205 aa15.31■□□□□ 0.04
TMEM260-214ENST00000556975 CRYGDP07320 174 aa15.31■□□□□ 0.04
TMEM260-214ENST00000556975 ZNF674Q2M3X9 581 aa15.31■□□□□ 0.04
TMEM260-214ENST00000556975 LINC01556Q5JQF7 62 aa15.31■□□□□ 0.04
TMEM260-214ENST00000556975 FAM162BQ5T6X4 162 aa15.31■□□□□ 0.04
TMEM260-214ENST00000556975 TRAV8-6A0A0B4J262 113 aa15.3■□□□□ 0.04
TMEM260-214ENST00000556975 BCL2L11O43521 198 aa15.3■□□□□ 0.04
TMEM260-214ENST00000556975 PAGE4O60829 102 aa15.3■□□□□ 0.04
TMEM260-214ENST00000556975 SH2D1AO60880 128 aa15.3■□□□□ 0.04
TMEM260-214ENST00000556975 LGALSLQ3ZCW2 172 aaPredicted RBP15.3■□□□□ 0.04
TMEM260-214ENST00000556975 UFSP1Q6NVU6 142 aa15.3■□□□□ 0.04
TMEM260-214ENST00000556975 Q6ZSN1 163 aa15.3■□□□□ 0.04
TMEM260-214ENST00000556975 SFT2D1Q8WV19 159 aa15.3■□□□□ 0.04
TMEM260-214ENST00000556975 ZNF471Q9BX82 626 aaPredicted RBP15.3■□□□□ 0.04
TMEM260-214ENST00000556975 KANTRA0A1W2PQU2 76 aa15.29■□□□□ 0.04
TMEM260-214ENST00000556975 ARMS2P0C7Q2 107 aa15.29■□□□□ 0.04
TMEM260-214ENST00000556975 LELP1Q5T871 98 aa15.29■□□□□ 0.04
TMEM260-214ENST00000556975 DMRTA1Q5VZB9 504 aa15.29■□□□□ 0.04
TMEM260-214ENST00000556975 ATP6V0E2Q8NHE4 81 aa15.29■□□□□ 0.04
TMEM260-214ENST00000556975 FAM213BQ8TBF2 198 aa15.29■□□□□ 0.04
TMEM260-214ENST00000556975 GTSF1LQ9H1H1 148 aa15.29■□□□□ 0.04
TMEM260-214ENST00000556975 A0A087WTM6 91 aa15.28■□□□□ 0.04
TMEM260-214ENST00000556975 H3BVH4 76 aa15.28■□□□□ 0.04
TMEM260-214ENST00000556975 M0R036 132 aa15.28■□□□□ 0.04
TMEM260-214ENST00000556975 EIF5AP63241 154 aaKnown RBP15.28■□□□□ 0.04
TMEM260-214ENST00000556975 LINC01559Q495D7 138 aa15.28■□□□□ 0.04
TMEM260-214ENST00000556975 S100A9P06702 114 aaKnown RBP15.27■□□□□ 0.04
TMEM260-214ENST00000556975 AKR1C3P42330 323 aa15.27■□□□□ 0.04
TMEM260-214ENST00000556975 OR10J3Q5JRS4 329 aa15.27■□□□□ 0.04
TMEM260-214ENST00000556975 CDPF1Q6NVV7 123 aa15.27■□□□□ 0.04
TMEM260-214ENST00000556975 SYT8Q8NBV8 401 aa15.27■□□□□ 0.04
TMEM260-214ENST00000556975 JPT2Q9H910 190 aa15.27■□□□□ 0.04
TMEM260-214ENST00000556975 SCRT2Q9NQ03 307 aa15.27■□□□□ 0.04
TMEM260-214ENST00000556975 IBA57-AS1B1ANH7 110 aa15.26■□□□□ 0.03
TMEM260-214ENST00000556975 LINC00694P0DN24 101 aa15.26■□□□□ 0.03
TMEM260-214ENST00000556975 MAPKAPK5-AS1Q8N8E1 139 aa15.26■□□□□ 0.03
TMEM260-214ENST00000556975 SAMD10Q9BYL1 202 aa15.26■□□□□ 0.03
TMEM260-214ENST00000556975 GRIFINA4D1Z8 144 aa15.25■□□□□ 0.03
TMEM260-214ENST00000556975 RHODO00212 210 aa15.24■□□□□ 0.03
TMEM260-214ENST00000556975 H2AFB1P0C5Y9 115 aa15.24■□□□□ 0.03
TMEM260-214ENST00000556975 TMUB2Q71RG4 321 aa15.24■□□□□ 0.03
TMEM260-214ENST00000556975 PHLDA3Q9Y5J5 127 aa15.24■□□□□ 0.03
TMEM260-214ENST00000556975 SFRP2Q96HF1 295 aa15.23■□□□□ 0.03
TMEM260-214ENST00000556975 MLST8Q9BVC4 326 aa15.23■□□□□ 0.03
TMEM260-214ENST00000556975 A0A1B0GV50 99 aa15.22■□□□□ 0.03
TMEM260-214ENST00000556975 GAGE12JA6NER3 117 aa15.22■□□□□ 0.03
TMEM260-214ENST00000556975 PFDN1O60925 122 aa15.22■□□□□ 0.03
TMEM260-214ENST00000556975 TPT1P13693 172 aaKnown RBP15.22■□□□□ 0.03
TMEM260-214ENST00000556975 GAGE1Q13065 139 aa15.22■□□□□ 0.03
TMEM260-214ENST00000556975 GAGE4Q13068 117 aa15.22■□□□□ 0.03
TMEM260-214ENST00000556975 GAGE5Q13069 117 aa15.22■□□□□ 0.03
TMEM260-214ENST00000556975 GAGE13Q4V321 117 aa15.22■□□□□ 0.03
TMEM260-214ENST00000556975 C14orf178Q8N769 122 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms