RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 PXMP4Q9Y6I8 212 aa3.53□□□□□ -1.84
ATXN3-245ENST00000556958 A0A0B4J2A0 478 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 PIGBOS1A0A0B4J2F0 54 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 IGHV3-16A0A0C4DH30 117 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 FBLL1A6NHQ2 334 aaKnown RBP3.52□□□□□ -1.85
ATXN3-245ENST00000556958 PMS2P5A8MQ11 134 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 MED6O75586 246 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 IFNA7P01567 189 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 OR5G3P0C626 314 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 RAB11AP62491 216 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 IFITM3Q01628 133 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 BTN1A1Q13410 526 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 TMEM183BQ1AE95 376 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 SPANXN5Q5MJ07 72 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 TMEM183AQ8IXX5 376 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 PRR26Q8N8Z3 221 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 TMEM75Q8N9X5 138 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 LYPD6BQ8NI32 183 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 DTD1Q8TEA8 209 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 DNAJC30Q96LL9 226 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 SEC22CQ9BRL7 303 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 SHPKQ9UHJ6 478 aa3.52□□□□□ -1.85
ATXN3-245ENST00000556958 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 TRAV1-1A0A0B4J248 108 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 SMCO3A2RU48 225 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 L7N2F9 121 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 M0R2P5 195 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 SYNGR2O43760 224 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 HLA-DQA1P01909 254 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 CRPP02741 224 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 IL5P05113 134 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 CHTF8P0CG12 524 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 CRISP2P16562 243 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 IAH1Q2TAA2 248 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-245ENST00000556958 MAJINQ3KP22 176 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 PIK3CD-AS1Q5SR53 167 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 C10orf25Q5T742 122 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 Q6ZQT7 251 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 ACOT7LQ6ZUV0 252 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 BPIFA4PQ86YQ2 179 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 C12orf45Q8N5I9 185 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-245ENST00000556958 CYB561D1Q8N8Q1 229 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 DEDD2Q8WXF8 326 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 RPL36ALQ969Q0 106 aaKnown RBP3.51□□□□□ -1.85
ATXN3-245ENST00000556958 C20orf85Q9H1P6 137 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 GPN1Q9HCN4 374 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-245ENST00000556958 NUDT15Q9NV35 164 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 PSENENQ9NZ42 101 aa3.51□□□□□ -1.85
ATXN3-245ENST00000556958 LSM5Q9Y4Y9 91 aaKnown RBP3.51□□□□□ -1.85
ATXN3-245ENST00000556958 IGLV1-50A0A075B6I6 118 aa3.5□□□□□ -1.85
ATXN3-245ENST00000556958 DUXBA0A1W2PPF3 345 aa3.5□□□□□ -1.85
ATXN3-245ENST00000556958 H3BP45 60 aa3.5□□□□□ -1.85
ATXN3-245ENST00000556958 SSNA1O43805 119 aa3.5□□□□□ -1.85
ATXN3-245ENST00000556958 SSSCA1O60232 199 aa3.5□□□□□ -1.85
ATXN3-245ENST00000556958 ZNF253O75346 499 aa3.5□□□□□ -1.85
ATXN3-245ENST00000556958 CFC1BP0CG36 223 aa3.5□□□□□ -1.85
ATXN3-245ENST00000556958 MGST1P10620 155 aaKnown RBP3.5□□□□□ -1.85
ATXN3-245ENST00000556958 S100A10P60903 97 aa3.5□□□□□ -1.85
ATXN3-245ENST00000556958 RRAS2P62070 204 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-245ENST00000556958 SELENOTP62341 195 aa3.5□□□□□ -1.85
ATXN3-245ENST00000556958 STPG4Q8N801 248 aa3.5□□□□□ -1.85
ATXN3-245ENST00000556958 FAM19A4Q96LR4 140 aa3.5□□□□□ -1.85
ATXN3-245ENST00000556958 SLC39A9Q9NUM3 307 aa3.5□□□□□ -1.85
ATXN3-245ENST00000556958 HSPB7Q9UBY9 170 aa3.5□□□□□ -1.85
ATXN3-245ENST00000556958 STRAPQ9Y3F4 350 aaKnown RBP3.5□□□□□ -1.85
ATXN3-245ENST00000556958 INMT-MINDY4F8WBC2 141 aa3.49□□□□□ -1.85
ATXN3-245ENST00000556958 GOSR2O14653 212 aa3.49□□□□□ -1.85
ATXN3-245ENST00000556958 SIX6O95475 246 aa3.49□□□□□ -1.85
ATXN3-245ENST00000556958 CRYGAP11844 174 aa3.49□□□□□ -1.85
ATXN3-245ENST00000556958 BTCP35070 178 aa3.49□□□□□ -1.85
ATXN3-245ENST00000556958 FGF8P55075 233 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-245ENST00000556958 PLP1P60201 277 aa3.49□□□□□ -1.85
ATXN3-245ENST00000556958 AKR1C1Q04828 323 aa3.49□□□□□ -1.85
ATXN3-245ENST00000556958 ERCC8Q13216 396 aa3.49□□□□□ -1.85
ATXN3-245ENST00000556958 ZFP69Q49AA0 526 aa3.49□□□□□ -1.85
ATXN3-245ENST00000556958 TMEM78Q5T7P6 136 aa3.49□□□□□ -1.85
ATXN3-245ENST00000556958 FAM159AQ6UWV7 190 aa3.49□□□□□ -1.85
ATXN3-245ENST00000556958 TMEM182Q6ZP80 229 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-245ENST00000556958 NRARPQ7Z6K4 114 aa3.49□□□□□ -1.85
ATXN3-245ENST00000556958 TCTE3Q8IZS6 198 aa3.49□□□□□ -1.85
ATXN3-245ENST00000556958 MRPL53Q96EL3 112 aaKnown RBP3.49□□□□□ -1.85
ATXN3-245ENST00000556958 CIB3Q96Q77 187 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-245ENST00000556958 ATP5SQ99766 215 aa3.49□□□□□ -1.85
ATXN3-245ENST00000556958 AGPAT4-IT1Q9H0P7 198 aa3.49□□□□□ -1.85
ATXN3-245ENST00000556958 LINC00474Q9P2X8 69 aa3.49□□□□□ -1.85
ATXN3-245ENST00000556958 hDV102S1A0JD36 115 aa3.48□□□□□ -1.85
ATXN3-245ENST00000556958 TMEM262E9PQX1 116 aa3.48□□□□□ -1.85
ATXN3-245ENST00000556958 MRPS12O15235 138 aaKnown RBP3.48□□□□□ -1.85
ATXN3-245ENST00000556958 NDUFS6O75380 124 aaKnown RBP3.48□□□□□ -1.85
ATXN3-245ENST00000556958 SNRPCP09234 159 aaKnown RBP3.48□□□□□ -1.85
ATXN3-245ENST00000556958 METTL15P1P0C7V9 234 aa3.48□□□□□ -1.85
ATXN3-245ENST00000556958 LINC00869P0C866 280 aa3.48□□□□□ -1.85
ATXN3-245ENST00000556958 HIST1H1EP10412 219 aaKnown RBP3.48□□□□□ -1.85
ATXN3-245ENST00000556958 SLC25A6P12236 298 aa3.48□□□□□ -1.85
ATXN3-245ENST00000556958 PVALBP20472 110 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-245ENST00000556958 RPL13AP40429 203 aaKnown RBP3.48□□□□□ -1.85
ATXN3-245ENST00000556958 CAV2P51636 162 aa3.48□□□□□ -1.85
ATXN3-245ENST00000556958 MIAQ16674 131 aa3.48□□□□□ -1.85
ATXN3-245ENST00000556958 LRRC37A5PQ49AS3 106 aa3.48□□□□□ -1.85
ATXN3-245ENST00000556958 MUC21Q5SSG8 566 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms