RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 FCER1GP30273 86 aa7.53□□□□□ -1.2
TMEM260-211ENST00000556648 SPINK13Q1W4C9 94 aa7.53□□□□□ -1.2
TMEM260-211ENST00000556648 SAMD13Q5VXD3 122 aa7.53□□□□□ -1.2
TMEM260-211ENST00000556648 RASL10AQ92737 203 aa7.53□□□□□ -1.2
TMEM260-211ENST00000556648 ITPR3Q14573 2671 aa7.53□□□□□ -1.2
TMEM260-211ENST00000556648 CREBBPQ92793 2442 aa7.53□□□□□ -1.2
TMEM260-211ENST00000556648 KNCNA6PVL3 124 aa7.52□□□□□ -1.2
TMEM260-211ENST00000556648 MED14OSP0DP75 135 aa7.52□□□□□ -1.2
TMEM260-211ENST00000556648 SNRPD3P62318 126 aaKnown RBP7.52□□□□□ -1.2
TMEM260-211ENST00000556648 ZNF124Q15973 351 aa7.52□□□□□ -1.2
TMEM260-211ENST00000556648 ANKRD39Q53RE8 183 aa7.52□□□□□ -1.2
TMEM260-211ENST00000556648 STPG4Q8N801 248 aa7.52□□□□□ -1.2
TMEM260-211ENST00000556648 OR11H1Q8NG94 326 aa7.52□□□□□ -1.2
TMEM260-211ENST00000556648 DPH3P1Q9H4G8 78 aa7.52□□□□□ -1.2
TMEM260-211ENST00000556648 GOLT1BQ9Y3E0 138 aa7.52□□□□□ -1.2
TMEM260-211ENST00000556648 LINC01619G3V211 115 aa7.52□□□□□ -1.21
TMEM260-211ENST00000556648 J3QKU1 62 aa7.52□□□□□ -1.21
TMEM260-211ENST00000556648 CD5LO43866 347 aa7.52□□□□□ -1.21
TMEM260-211ENST00000556648 NXPH4O95158 308 aa7.52□□□□□ -1.21
TMEM260-211ENST00000556648 HINT1P49773 126 aaPredicted RBP7.52□□□□□ -1.21
TMEM260-211ENST00000556648 LGALS9BQ3B8N2 356 aa7.52□□□□□ -1.21
TMEM260-211ENST00000556648 LGALS9CQ6DKI2 356 aa7.52□□□□□ -1.21
TMEM260-211ENST00000556648 C11orf44Q8N8P7 122 aa7.52□□□□□ -1.21
TMEM260-211ENST00000556648 KLHL30-AS1Q8NEE0 82 aa7.52□□□□□ -1.21
TMEM260-211ENST00000556648 C4orf3Q8WVX3 66 aa7.52□□□□□ -1.21
TMEM260-211ENST00000556648 MRAP2Q96G30 205 aa7.52□□□□□ -1.21
TMEM260-211ENST00000556648 DKK2Q9UBU2 259 aa7.52□□□□□ -1.21
TMEM260-211ENST00000556648 AKAP9Q99996 3911 aa7.51□□□□□ -1.21
TMEM260-211ENST00000556648 PRSS47A8MTI9 375 aa7.51□□□□□ -1.21
TMEM260-211ENST00000556648 HSBP1L1C9JCN9 74 aa7.51□□□□□ -1.21
TMEM260-211ENST00000556648 CD7P09564 240 aa7.51□□□□□ -1.21
TMEM260-211ENST00000556648 FAM159AQ6UWV7 190 aa7.51□□□□□ -1.21
TMEM260-211ENST00000556648 AMTNQ6UX39 209 aa7.51□□□□□ -1.21
TMEM260-211ENST00000556648 LINC00469Q8N7U9 141 aa7.51□□□□□ -1.21
TMEM260-211ENST00000556648 OR1N2Q8NGR9 330 aa7.51□□□□□ -1.21
TMEM260-211ENST00000556648 DLX4Q92988 240 aaPredicted RBP7.51□□□□□ -1.21
TMEM260-211ENST00000556648 MDFICQ9P1T7 246 aa7.51□□□□□ -1.21
TMEM260-211ENST00000556648 MRPS16Q9Y3D3 137 aaKnown RBP7.51□□□□□ -1.21
TMEM260-211ENST00000556648 AP1S3Q96PC3 154 aa7.51□□□□□ -1.21
TMEM260-211ENST00000556648 ODF3Q96PU9 254 aa7.51□□□□□ -1.21
TMEM260-211ENST00000556648 SMIM2Q9BVW6 85 aa7.51□□□□□ -1.21
TMEM260-211ENST00000556648 KIF25-AS1Q9Y6Z4 181 aa7.51□□□□□ -1.21
TMEM260-211ENST00000556648 PDZD2O15018 2839 aa7.5□□□□□ -1.21
TMEM260-211ENST00000556648 A0A087WWL8 130 aa7.5□□□□□ -1.21
TMEM260-211ENST00000556648 IGHV3-16A0A0C4DH30 117 aa7.5□□□□□ -1.21
TMEM260-211ENST00000556648 A0A1W2PRX2 142 aa7.5□□□□□ -1.21
TMEM260-211ENST00000556648 RBMY1BA6NDE4 496 aaKnown RBP7.5□□□□□ -1.21
TMEM260-211ENST00000556648 RBMY1EA6NEQ0 496 aaKnown RBP7.5□□□□□ -1.21
TMEM260-211ENST00000556648 RBMY1DP0C7P1 496 aaKnown RBP7.5□□□□□ -1.21
TMEM260-211ENST00000556648 RBMY1A1P0DJD3 496 aaKnown RBP7.5□□□□□ -1.21
TMEM260-211ENST00000556648 RBMY1CP0DJD4 496 aa7.5□□□□□ -1.21
TMEM260-211ENST00000556648 G0S2P27469 103 aa7.5□□□□□ -1.21
TMEM260-211ENST00000556648 LINC00315P59091 139 aa7.5□□□□□ -1.21
TMEM260-211ENST00000556648 RBMY1FQ15415 496 aaKnown RBP7.5□□□□□ -1.21
TMEM260-211ENST00000556648 NEGR1Q7Z3B1 354 aa7.5□□□□□ -1.21
TMEM260-211ENST00000556648 TMEM61Q8N0U2 210 aa7.5□□□□□ -1.21
TMEM260-211ENST00000556648 TMEM86BQ8N661 226 aa7.5□□□□□ -1.21
TMEM260-211ENST00000556648 YAE1D1Q9NRH1 226 aa7.5□□□□□ -1.21
TMEM260-211ENST00000556648 CDKN1BP46527 198 aa7.49□□□□□ -1.21
TMEM260-211ENST00000556648 DEFB131AP59861 70 aa7.49□□□□□ -1.21
TMEM260-211ENST00000556648 LAGE3Q14657 143 aa7.49□□□□□ -1.21
TMEM260-211ENST00000556648 SLC25A34Q6PIV7 304 aa7.49□□□□□ -1.21
TMEM260-211ENST00000556648 FOXI2Q6ZQN5 318 aa7.49□□□□□ -1.21
TMEM260-211ENST00000556648 DEFB125Q8N687 156 aa7.49□□□□□ -1.21
TMEM260-211ENST00000556648 OR9G4Q8NGQ1 327 aa7.49□□□□□ -1.21
TMEM260-211ENST00000556648 DPF1Q92782 380 aa7.49□□□□□ -1.21
TMEM260-211ENST00000556648 ZMAT5Q9UDW3 170 aaKnown RBP7.49□□□□□ -1.21
TMEM260-211ENST00000556648 KMT2BQ9UMN6 2715 aaPredicted RBP7.49□□□□□ -1.21
TMEM260-211ENST00000556648 SMIM17P0DL12 118 aa7.49□□□□□ -1.21
TMEM260-211ENST00000556648 FGF6P10767 208 aa7.49□□□□□ -1.21
TMEM260-211ENST00000556648 ODF1Q14990 250 aa7.49□□□□□ -1.21
TMEM260-211ENST00000556648 Q6ZVH6 145 aa7.49□□□□□ -1.21
TMEM260-211ENST00000556648 Q8N1Y9 231 aa7.49□□□□□ -1.21
TMEM260-211ENST00000556648 DEFB104AQ8WTQ1 72 aa7.49□□□□□ -1.21
TMEM260-211ENST00000556648 C9orf85Q96MD7 179 aa7.49□□□□□ -1.21
TMEM260-211ENST00000556648 FOXC2Q99958 501 aa7.49□□□□□ -1.21
TMEM260-211ENST00000556648 DUSP14O95147 198 aaKnown RBP7.48□□□□□ -1.21
TMEM260-211ENST00000556648 PRM2P04554 102 aa7.48□□□□□ -1.21
TMEM260-211ENST00000556648 COX8AP10176 69 aa7.48□□□□□ -1.21
TMEM260-211ENST00000556648 CD28P10747 220 aa7.48□□□□□ -1.21
TMEM260-211ENST00000556648 SUMO2P61956 95 aaKnown RBP7.48□□□□□ -1.21
TMEM260-211ENST00000556648 COL5A1-AS1Q5SY13 56 aa7.48□□□□□ -1.21
TMEM260-211ENST00000556648 C2orf91Q6ZV80 131 aa7.48□□□□□ -1.21
TMEM260-211ENST00000556648 RAX2Q96IS3 184 aa7.48□□□□□ -1.21
TMEM260-211ENST00000556648 CUBNO60494 3623 aa7.48□□□□□ -1.21
TMEM260-211ENST00000556648 SONP18583 2426 aaKnown RBP7.48□□□□□ -1.21
TMEM260-211ENST00000556648 TLN2Q9Y4G6 2542 aa7.48□□□□□ -1.21
TMEM260-211ENST00000556648 CHD6Q8TD26 2715 aa7.47□□□□□ -1.21
TMEM260-211ENST00000556648 IGHV1OR15-1A0A075B7D0 117 aa7.47□□□□□ -1.21
TMEM260-211ENST00000556648 NUDT3O95989 172 aa7.47□□□□□ -1.21
TMEM260-211ENST00000556648 SUMO4Q6EEV6 95 aa7.47□□□□□ -1.21
TMEM260-211ENST00000556648 POM121L12Q8N7R1 296 aa7.47□□□□□ -1.21
TMEM260-211ENST00000556648 FLNAP21333 2647 aaKnown RBP7.47□□□□□ -1.21
TMEM260-211ENST00000556648 PRSS1P07477 247 aa7.47□□□□□ -1.21
TMEM260-211ENST00000556648 ZNF25P17030 456 aaPredicted RBP7.47□□□□□ -1.21
TMEM260-211ENST00000556648 MPV17L2Q567V2 206 aa7.47□□□□□ -1.21
TMEM260-211ENST00000556648 DYNLRB2Q8TF09 96 aa7.47□□□□□ -1.21
TMEM260-211ENST00000556648 PEMTQ9UBM1 199 aa7.47□□□□□ -1.21
TMEM260-211ENST00000556648 SORL1Q92673 2214 aa7.46□□□□□ -1.22
TMEM260-211ENST00000556648 H3BMM0 161 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms