RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 K7EQD1 137 aa6.73□□□□□ -1.33
SCFD1-220ENST00000556486 IGHV3-53P01767 116 aa6.73□□□□□ -1.33
SCFD1-220ENST00000556486 ORM1P02763 201 aa6.73□□□□□ -1.33
SCFD1-220ENST00000556486 PHYHIPLQ96FC7 376 aa6.73□□□□□ -1.33
SCFD1-220ENST00000556486 WDR61Q9GZS3 305 aaKnown RBP6.73□□□□□ -1.33
SCFD1-220ENST00000556486 SLC25A31Q9H0C2 315 aa6.73□□□□□ -1.33
SCFD1-220ENST00000556486 IGLV5-52A0A0A0MRZ9 124 aa6.72□□□□□ -1.33
SCFD1-220ENST00000556486 E5RGE8 158 aa6.72□□□□□ -1.33
SCFD1-220ENST00000556486 EVI2AP22794 236 aa6.72□□□□□ -1.33
SCFD1-220ENST00000556486 SRIP30626 198 aa6.72□□□□□ -1.33
SCFD1-220ENST00000556486 C10orf126Q8N4M7 172 aa6.72□□□□□ -1.33
SCFD1-220ENST00000556486 Q8TAT8 98 aa6.72□□□□□ -1.33
SCFD1-220ENST00000556486 ZNF479Q96JC4 524 aa6.72□□□□□ -1.33
SCFD1-220ENST00000556486 PAXXQ9BUH6 204 aa6.72□□□□□ -1.33
SCFD1-220ENST00000556486 NMES1Q9C002 83 aa6.72□□□□□ -1.33
SCFD1-220ENST00000556486 FAT3Q8TDW7 4589 aa6.72□□□□□ -1.33
SCFD1-220ENST00000556486 RNF213Q63HN8 5207 aa6.71□□□□□ -1.34
SCFD1-220ENST00000556486 TRGV4A0A0C4DH28 118 aa6.71□□□□□ -1.34
SCFD1-220ENST00000556486 FAM240BA0A1B0GVZ2 78 aa6.71□□□□□ -1.34
SCFD1-220ENST00000556486 C9JCJ5 164 aa6.71□□□□□ -1.34
SCFD1-220ENST00000556486 OR10J4P0C629 311 aa6.71□□□□□ -1.34
SCFD1-220ENST00000556486 CSN1S1P47710 185 aa6.71□□□□□ -1.34
SCFD1-220ENST00000556486 ASAH1Q13510 395 aa6.71□□□□□ -1.34
SCFD1-220ENST00000556486 SH2D6Q7Z4S9 175 aa6.71□□□□□ -1.34
SCFD1-220ENST00000556486 WFDC10BQ8IUB3 73 aa6.71□□□□□ -1.34
SCFD1-220ENST00000556486 TXNDC17Q9BRA2 123 aa6.71□□□□□ -1.34
SCFD1-220ENST00000556486 NDUFA13Q9P0J0 144 aa6.71□□□□□ -1.34
SCFD1-220ENST00000556486 TRAV4A0A0B4J268 109 aa6.7□□□□□ -1.34
SCFD1-220ENST00000556486 IGLV5-39A0A0G2JS06 123 aa6.7□□□□□ -1.34
SCFD1-220ENST00000556486 C17orf112F2Z3M2 114 aa6.7□□□□□ -1.34
SCFD1-220ENST00000556486 OR7C2O60412 319 aa6.7□□□□□ -1.34
SCFD1-220ENST00000556486 SFTA3P0C7M3 94 aa6.7□□□□□ -1.34
SCFD1-220ENST00000556486 RANP62826 216 aaKnown RBP6.7□□□□□ -1.34
SCFD1-220ENST00000556486 CYCSP99999 105 aaKnown RBP6.7□□□□□ -1.34
SCFD1-220ENST00000556486 MUC21Q5SSG8 566 aa6.7□□□□□ -1.34
SCFD1-220ENST00000556486 FAM159AQ6UWV7 190 aa6.7□□□□□ -1.34
SCFD1-220ENST00000556486 PCNPQ8WW12 178 aaKnown RBP6.7□□□□□ -1.34
SCFD1-220ENST00000556486 OR5AC2Q9NZP5 309 aa6.7□□□□□ -1.34
SCFD1-220ENST00000556486 LRCOL1A6NCL2 159 aa6.69□□□□□ -1.34
SCFD1-220ENST00000556486 UBE2L3P68036 154 aaKnown RBP6.69□□□□□ -1.34
SCFD1-220ENST00000556486 TMEM183BQ1AE95 376 aa6.69□□□□□ -1.34
SCFD1-220ENST00000556486 KHDC3LQ587J8 217 aa6.69□□□□□ -1.34
SCFD1-220ENST00000556486 TMEM183AQ8IXX5 376 aa6.69□□□□□ -1.34
SCFD1-220ENST00000556486 NTN5Q8WTR8 489 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-220ENST00000556486 SGK494Q96LW2 274 aa6.69□□□□□ -1.34
SCFD1-220ENST00000556486 ATP5SQ99766 215 aa6.69□□□□□ -1.34
SCFD1-220ENST00000556486 TMEM70Q9BUB7 260 aa6.69□□□□□ -1.34
SCFD1-220ENST00000556486 IGHV3-16A0A0C4DH30 117 aa6.68□□□□□ -1.34
SCFD1-220ENST00000556486 M0R2P5 195 aa6.68□□□□□ -1.34
SCFD1-220ENST00000556486 CIDEAO60543 219 aa6.68□□□□□ -1.34
SCFD1-220ENST00000556486 CRYGDP07320 174 aa6.68□□□□□ -1.34
SCFD1-220ENST00000556486 TAS2R45P59539 299 aa6.68□□□□□ -1.34
SCFD1-220ENST00000556486 LINC01556Q5JQF7 62 aa6.68□□□□□ -1.34
SCFD1-220ENST00000556486 OTORQ9NRC9 128 aa6.68□□□□□ -1.34
SCFD1-220ENST00000556486 TRAV21A0A0B4J279 112 aa6.67□□□□□ -1.34
SCFD1-220ENST00000556486 IGHV3-38A0A0C4DH36 116 aa6.67□□□□□ -1.34
SCFD1-220ENST00000556486 IBA57-AS1B1ANH7 110 aa6.67□□□□□ -1.34
SCFD1-220ENST00000556486 C1QBP02746 253 aa6.67□□□□□ -1.34
SCFD1-220ENST00000556486 GATA1P15976 413 aaPredicted RBP6.67□□□□□ -1.34
SCFD1-220ENST00000556486 H2BFSP57053 126 aa6.67□□□□□ -1.34
SCFD1-220ENST00000556486 OR4C5Q8NGB2 326 aa6.67□□□□□ -1.34
SCFD1-220ENST00000556486 OR11H4Q8NGC9 324 aa6.67□□□□□ -1.34
SCFD1-220ENST00000556486 DEFB104AQ8WTQ1 72 aa6.67□□□□□ -1.34
SCFD1-220ENST00000556486 PPP1R1CQ8WVI7 109 aa6.67□□□□□ -1.34
SCFD1-220ENST00000556486 SIX6O95475 246 aa6.66□□□□□ -1.34
SCFD1-220ENST00000556486 LAGE3Q14657 143 aa6.66□□□□□ -1.34
SCFD1-220ENST00000556486 LRRC37A5PQ49AS3 106 aa6.66□□□□□ -1.34
SCFD1-220ENST00000556486 FFAR4Q5NUL3 377 aa6.66□□□□□ -1.34
SCFD1-220ENST00000556486 FAM74A1Q5RGS3 127 aa6.66□□□□□ -1.34
SCFD1-220ENST00000556486 S100ZQ8WXG8 99 aa6.66□□□□□ -1.34
SCFD1-220ENST00000556486 PTH2Q96A98 100 aa6.66□□□□□ -1.34
SCFD1-220ENST00000556486 TVP23CQ96ET8 276 aa6.66□□□□□ -1.34
SCFD1-220ENST00000556486 KCNS1Q96KK3 526 aa6.66□□□□□ -1.34
SCFD1-220ENST00000556486 HSPB11Q9Y547 144 aa6.66□□□□□ -1.34
SCFD1-220ENST00000556486 SERTM2A0A1B0GWG4 89 aa6.65□□□□□ -1.34
SCFD1-220ENST00000556486 TRBV6-4A0A1B0GX49 114 aa6.65□□□□□ -1.34
SCFD1-220ENST00000556486 GNRH2O43555 120 aa6.65□□□□□ -1.34
SCFD1-220ENST00000556486 PSCAO43653 123 aa6.65□□□□□ -1.34
SCFD1-220ENST00000556486 ATP6V1G1O75348 118 aa6.65□□□□□ -1.34
SCFD1-220ENST00000556486 MPC2O95563 127 aa6.65□□□□□ -1.34
SCFD1-220ENST00000556486 TYMSP04818 313 aa6.65□□□□□ -1.34
SCFD1-220ENST00000556486 PFN1P07737 140 aaKnown RBP6.65□□□□□ -1.34
SCFD1-220ENST00000556486 PET100P0DJ07 73 aa6.65□□□□□ -1.34
SCFD1-220ENST00000556486 CMTM2Q8TAZ6 248 aa6.65□□□□□ -1.34
SCFD1-220ENST00000556486 ENKURQ8TC29 256 aa6.65□□□□□ -1.34
SCFD1-220ENST00000556486 MARVELD1Q9BSK0 173 aa6.65□□□□□ -1.34
SCFD1-220ENST00000556486 SDF2L1Q9HCN8 221 aa6.65□□□□□ -1.34
SCFD1-220ENST00000556486 C11orf21Q9P2W6 132 aa6.65□□□□□ -1.34
SCFD1-220ENST00000556486 MBD2Q9UBB5 411 aa6.65□□□□□ -1.34
SCFD1-220ENST00000556486 LOC100131303A0A0U1RQF7 123 aa6.64□□□□□ -1.35
SCFD1-220ENST00000556486 PGPA6NDG6 321 aa6.64□□□□□ -1.35
SCFD1-220ENST00000556486 FBLL1A6NHQ2 334 aaKnown RBP6.64□□□□□ -1.35
SCFD1-220ENST00000556486 UPK1BO75841 260 aa6.64□□□□□ -1.35
SCFD1-220ENST00000556486 LINC01620Q4KN68 170 aa6.64□□□□□ -1.35
SCFD1-220ENST00000556486 GOLT1AQ6ZVE7 132 aa6.64□□□□□ -1.35
SCFD1-220ENST00000556486 Q8N814 137 aa6.64□□□□□ -1.35
SCFD1-220ENST00000556486 SLC25A29Q8N8R3 303 aa6.64□□□□□ -1.35
SCFD1-220ENST00000556486 SUN5Q8TC36 379 aa6.64□□□□□ -1.35
SCFD1-220ENST00000556486 HYLS1Q96M11 299 aa6.64□□□□□ -1.35
SCFD1-220ENST00000556486 TREM1Q9NP99 234 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms