RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 ARPC5O15511 151 aa8.58□□□□□ -1.04
SNX6-207ENST00000556303 MGST1P10620 155 aaKnown RBP8.58□□□□□ -1.04
SNX6-207ENST00000556303 RNASE3P12724 160 aaKnown RBP8.58□□□□□ -1.04
SNX6-207ENST00000556303 RHOHQ15669 191 aa8.58□□□□□ -1.04
SNX6-207ENST00000556303 STOML3Q8TAV4 291 aa8.58□□□□□ -1.04
SNX6-207ENST00000556303 CYTL1Q9NRR1 136 aa8.58□□□□□ -1.04
SNX6-207ENST00000556303 PGPEP1Q9NXJ5 209 aa8.58□□□□□ -1.04
SNX6-207ENST00000556303 TRBV6-1A0A0K0K1D8 114 aa8.57□□□□□ -1.04
SNX6-207ENST00000556303 HMSDA8MTL9 139 aa8.57□□□□□ -1.04
SNX6-207ENST00000556303 S100A4P26447 101 aaKnown RBP8.57□□□□□ -1.04
SNX6-207ENST00000556303 ZFP2Q6ZN57 461 aa8.57□□□□□ -1.04
SNX6-207ENST00000556303 SLC25A29Q8N8R3 303 aa8.57□□□□□ -1.04
SNX6-207ENST00000556303 LINC00479Q96M42 142 aa8.57□□□□□ -1.04
SNX6-207ENST00000556303 IGKV3D-20A0A0C4DH25 116 aa8.56□□□□□ -1.04
SNX6-207ENST00000556303 MAP1LC3B2A6NCE7 125 aa8.56□□□□□ -1.04
SNX6-207ENST00000556303 A8MWV9 139 aa8.56□□□□□ -1.04
SNX6-207ENST00000556303 UMAD1C9J7I0 102 aa8.56□□□□□ -1.04
SNX6-207ENST00000556303 SEC11BP0C7V7 166 aa8.56□□□□□ -1.04
SNX6-207ENST00000556303 UBE2G2P60604 165 aa8.56□□□□□ -1.04
SNX6-207ENST00000556303 ERVFC1-1P60608 527 aa8.56□□□□□ -1.04
SNX6-207ENST00000556303 ZNF506Q5JVG8 444 aa8.56□□□□□ -1.04
SNX6-207ENST00000556303 DNLZQ5SXM8 178 aa8.56□□□□□ -1.04
SNX6-207ENST00000556303 CDPF1Q6NVV7 123 aa8.56□□□□□ -1.04
SNX6-207ENST00000556303 DPPA3Q6W0C5 159 aa8.56□□□□□ -1.04
SNX6-207ENST00000556303 KCNRGQ8N5I3 272 aa8.56□□□□□ -1.04
SNX6-207ENST00000556303 NHLRC2Q8NBF2 726 aa8.56□□□□□ -1.04
SNX6-207ENST00000556303 FMC1Q96HJ9 113 aa8.56□□□□□ -1.04
SNX6-207ENST00000556303 MAP1LC3BQ9GZQ8 125 aa8.56□□□□□ -1.04
SNX6-207ENST00000556303 IL36BQ9NZH7 164 aa8.56□□□□□ -1.04
SNX6-207ENST00000556303 MSRB1Q9NZV6 116 aa8.56□□□□□ -1.04
SNX6-207ENST00000556303 TRAV8-6A0A0B4J262 113 aa8.55□□□□□ -1.04
SNX6-207ENST00000556303 TRAV34A0A0B4J273 112 aa8.55□□□□□ -1.04
SNX6-207ENST00000556303 A0A0D9SG52 128 aa8.55□□□□□ -1.04
SNX6-207ENST00000556303 PGPEP1LA6NFU8 196 aa8.55□□□□□ -1.04
SNX6-207ENST00000556303 CRYGDP07320 174 aa8.55□□□□□ -1.04
SNX6-207ENST00000556303 ASIPP42127 132 aa8.55□□□□□ -1.04
SNX6-207ENST00000556303 FGF8P55075 233 aaPredicted RBP8.55□□□□□ -1.04
SNX6-207ENST00000556303 LINC01556Q5JQF7 62 aa8.55□□□□□ -1.04
SNX6-207ENST00000556303 Q86TA4 180 aa8.55□□□□□ -1.04
SNX6-207ENST00000556303 WFDC10BQ8IUB3 73 aa8.55□□□□□ -1.04
SNX6-207ENST00000556303 IGHV3-38A0A0C4DH36 116 aa8.54□□□□□ -1.04
SNX6-207ENST00000556303 B4DEV8 164 aa8.54□□□□□ -1.04
SNX6-207ENST00000556303 S100A9P06702 114 aaKnown RBP8.54□□□□□ -1.04
SNX6-207ENST00000556303 KRTAP10-2P60368 255 aa8.54□□□□□ -1.04
SNX6-207ENST00000556303 UBE2G1P62253 170 aa8.54□□□□□ -1.04
SNX6-207ENST00000556303 EIF5AP63241 154 aaKnown RBP8.54□□□□□ -1.04
SNX6-207ENST00000556303 FAM162BQ5T6X4 162 aa8.54□□□□□ -1.04
SNX6-207ENST00000556303 MBD3L1Q8WWY6 194 aa8.54□□□□□ -1.04
SNX6-207ENST00000556303 GTSF1LQ9H1H1 148 aa8.54□□□□□ -1.04
SNX6-207ENST00000556303 LOC100131303A0A0U1RQF7 123 aa8.53□□□□□ -1.04
SNX6-207ENST00000556303 LELP1Q5T871 98 aa8.53□□□□□ -1.04
SNX6-207ENST00000556303 SYT8Q8NBV8 401 aa8.53□□□□□ -1.04
SNX6-207ENST00000556303 PARLQ9H300 379 aa8.53□□□□□ -1.04
SNX6-207ENST00000556303 KANTRA0A1W2PQU2 76 aa8.52□□□□□ -1.05
SNX6-207ENST00000556303 KRBOX1C9JBD0 128 aa8.52□□□□□ -1.05
SNX6-207ENST00000556303 RHODO00212 210 aa8.52□□□□□ -1.05
SNX6-207ENST00000556303 LTAP01374 205 aa8.52□□□□□ -1.05
SNX6-207ENST00000556303 CRIP1P50238 77 aa8.52□□□□□ -1.05
SNX6-207ENST00000556303 ZNF674Q2M3X9 581 aa8.52□□□□□ -1.05
SNX6-207ENST00000556303 LGALSLQ3ZCW2 172 aaPredicted RBP8.52□□□□□ -1.05
SNX6-207ENST00000556303 LINC01559Q495D7 138 aa8.52□□□□□ -1.05
SNX6-207ENST00000556303 CST9LP1Q5W188 147 aa8.52□□□□□ -1.05
SNX6-207ENST00000556303 ATP6V0E2Q8NHE4 81 aa8.52□□□□□ -1.05
SNX6-207ENST00000556303 ZC2HC1AQ96GY0 325 aa8.52□□□□□ -1.05
SNX6-207ENST00000556303 A0A087WTM6 91 aa8.51□□□□□ -1.05
SNX6-207ENST00000556303 IGHV3-73A0A0B4J1V6 119 aa8.51□□□□□ -1.05
SNX6-207ENST00000556303 IBA57-AS1B1ANH7 110 aa8.51□□□□□ -1.05
SNX6-207ENST00000556303 OR10J3Q5JRS4 329 aa8.51□□□□□ -1.05
SNX6-207ENST00000556303 UFSP1Q6NVU6 142 aa8.51□□□□□ -1.05
SNX6-207ENST00000556303 SFT2D1Q8WV19 159 aa8.51□□□□□ -1.05
SNX6-207ENST00000556303 SCRT2Q9NQ03 307 aa8.51□□□□□ -1.05
SNX6-207ENST00000556303 TNFRSF18Q9Y5U5 241 aa8.51□□□□□ -1.05
SNX6-207ENST00000556303 A0A087WWC5 75 aa8.5□□□□□ -1.05
SNX6-207ENST00000556303 SMLR1H3BR10 107 aa8.5□□□□□ -1.05
SNX6-207ENST00000556303 BCL2L11O43521 198 aa8.5□□□□□ -1.05
SNX6-207ENST00000556303 SH2D1AO60880 128 aa8.5□□□□□ -1.05
SNX6-207ENST00000556303 ARMS2P0C7Q2 107 aa8.5□□□□□ -1.05
SNX6-207ENST00000556303 AKR1C3P42330 323 aa8.5□□□□□ -1.05
SNX6-207ENST00000556303 LAGE3Q14657 143 aa8.5□□□□□ -1.05
SNX6-207ENST00000556303 MAPKAPK5-AS1Q8N8E1 139 aa8.5□□□□□ -1.05
SNX6-207ENST00000556303 OR11H4Q8NGC9 324 aa8.5□□□□□ -1.05
SNX6-207ENST00000556303 ZNF471Q9BX82 626 aaPredicted RBP8.5□□□□□ -1.05
SNX6-207ENST00000556303 H3BVH4 76 aa8.49□□□□□ -1.05
SNX6-207ENST00000556303 PAGE4O60829 102 aa8.49□□□□□ -1.05
SNX6-207ENST00000556303 PFDN1O60925 122 aa8.49□□□□□ -1.05
SNX6-207ENST00000556303 CXCL1P09341 107 aa8.49□□□□□ -1.05
SNX6-207ENST00000556303 LINC00694P0DN24 101 aa8.49□□□□□ -1.05
SNX6-207ENST00000556303 Q8N1X5 172 aa8.49□□□□□ -1.05
SNX6-207ENST00000556303 SFRP2Q96HF1 295 aa8.49□□□□□ -1.05
SNX6-207ENST00000556303 PHLDA3Q9Y5J5 127 aa8.49□□□□□ -1.05
SNX6-207ENST00000556303 FAT1Q14517 4588 aa8.48□□□□□ -1.05
SNX6-207ENST00000556303 H2AFB1P0C5Y9 115 aa8.48□□□□□ -1.05
SNX6-207ENST00000556303 TPT1P13693 172 aaKnown RBP8.48□□□□□ -1.05
SNX6-207ENST00000556303 RAB5CP51148 216 aa8.48□□□□□ -1.05
SNX6-207ENST00000556303 Q6ZSN1 163 aa8.48□□□□□ -1.05
SNX6-207ENST00000556303 ZFP82Q8N141 532 aa8.48□□□□□ -1.05
SNX6-207ENST00000556303 FAM213BQ8TBF2 198 aa8.48□□□□□ -1.05
SNX6-207ENST00000556303 DNAH8Q96JB1 4490 aa8.47□□□□□ -1.05
SNX6-207ENST00000556303 TRBV10-1A0A0K0K1A3 114 aa8.47□□□□□ -1.05
SNX6-207ENST00000556303 M0R036 132 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms