RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 RPH3ALQ9UNE2 315 aa5.23□□□□□ -1.57
PTCSC3-201ENST00000556013 VPS13BQ7Z7G8 4022 aa5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 LOC100131303A0A0U1RQF7 123 aa5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 PGPEP1LA6NFU8 196 aa5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 F6UZH7 168 aa5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 HMGB3O15347 200 aaKnown RBP5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 PSCAO43653 123 aa5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 EIF3GO75821 320 aaKnown RBP eCLIP5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 PTTG1O95997 202 aa5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 INAFM2P0DMQ5 153 aa5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 RNASE3P12724 160 aaKnown RBP5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 FGF8P55075 233 aaPredicted RBP5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 KRTAP10-1P60331 282 aa5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 GNG5P63218 68 aa5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 OR10J3Q5JRS4 329 aa5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 TOR2AQ5JU69 321 aa5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 DPPA3Q6W0C5 159 aa5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 HSD17B11Q8NBQ5 300 aa5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 INO80EQ8NBZ0 244 aaPredicted RBP5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 HIST1H2BAQ96A08 127 aa5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 MED28Q9H204 178 aa5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 C11orf21Q9P2W6 132 aa5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 ALG5Q9Y673 324 aa5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 COX11Q9Y6N1 276 aa5.22□□□□□ -1.57
PTCSC3-201ENST00000556013 A0A087WWC5 75 aa5.21□□□□□ -1.58
PTCSC3-201ENST00000556013 TRAV8-3A0A0A6YYJ7 113 aa5.21□□□□□ -1.58
PTCSC3-201ENST00000556013 BORCS7-ASMTA0A0B4J1R7 106 aa5.21□□□□□ -1.58
PTCSC3-201ENST00000556013 FAM229AH3BQW9 127 aa5.21□□□□□ -1.58
PTCSC3-201ENST00000556013 GIPP09681 153 aaPredicted RBP5.21□□□□□ -1.58
PTCSC3-201ENST00000556013 SEC11BP0C7V7 166 aa5.21□□□□□ -1.58
PTCSC3-201ENST00000556013 ZNF506Q5JVG8 444 aa5.21□□□□□ -1.58
PTCSC3-201ENST00000556013 PRNTQ86SH4 94 aa5.21□□□□□ -1.58
PTCSC3-201ENST00000556013 SGK494Q96LW2 274 aa5.21□□□□□ -1.58
PTCSC3-201ENST00000556013 IL36BQ9NZH7 164 aa5.21□□□□□ -1.58
PTCSC3-201ENST00000556013 ZFP30Q9Y2G7 519 aa5.21□□□□□ -1.58
PTCSC3-201ENST00000556013 IGLV5-52A0A0A0MRZ9 124 aa5.2□□□□□ -1.58
PTCSC3-201ENST00000556013 IGKV3D-20A0A0C4DH25 116 aa5.2□□□□□ -1.58
PTCSC3-201ENST00000556013 CTXND1A0A1B0GTU2 59 aa5.2□□□□□ -1.58
PTCSC3-201ENST00000556013 GGTLC3B5MD39 225 aa5.2□□□□□ -1.58
PTCSC3-201ENST00000556013 RHODO00212 210 aa5.2□□□□□ -1.58
PTCSC3-201ENST00000556013 S100A4P26447 101 aaKnown RBP5.2□□□□□ -1.58
PTCSC3-201ENST00000556013 FHITP49789 147 aa5.2□□□□□ -1.58
PTCSC3-201ENST00000556013 Q8N814 137 aa5.2□□□□□ -1.58
PTCSC3-201ENST00000556013 LINC00479Q96M42 142 aa5.2□□□□□ -1.58
PTCSC3-201ENST00000556013 TCEAL7Q9BRU2 100 aa5.2□□□□□ -1.58
PTCSC3-201ENST00000556013 TRBV6-1A0A0K0K1D8 114 aa5.19□□□□□ -1.58
PTCSC3-201ENST00000556013 LINC00694P0DN24 101 aa5.19□□□□□ -1.58
PTCSC3-201ENST00000556013 ASIPP42127 132 aa5.19□□□□□ -1.58
PTCSC3-201ENST00000556013 Q5VSD8 79 aa5.19□□□□□ -1.58
PTCSC3-201ENST00000556013 UFSP1Q6NVU6 142 aa5.19□□□□□ -1.58
PTCSC3-201ENST00000556013 SYT8Q8NBV8 401 aa5.19□□□□□ -1.58
PTCSC3-201ENST00000556013 FAM210AQ96ND0 272 aa5.19□□□□□ -1.58
PTCSC3-201ENST00000556013 CHCHD7Q9BUK0 85 aa5.19□□□□□ -1.58
PTCSC3-201ENST00000556013 PARLQ9H300 379 aa5.19□□□□□ -1.58
PTCSC3-201ENST00000556013 ARL2-SNX15V9GYD0 113 aa5.19□□□□□ -1.58
PTCSC3-201ENST00000556013 HERC1Q15751 4861 aa5.19□□□□□ -1.58
PTCSC3-201ENST00000556013 TRBV10-1A0A0K0K1A3 114 aa5.18□□□□□ -1.58
PTCSC3-201ENST00000556013 RNF222A6NCQ9 220 aa5.18□□□□□ -1.58
PTCSC3-201ENST00000556013 IFNA7P01567 189 aa5.18□□□□□ -1.58
PTCSC3-201ENST00000556013 ELOBQ15370 118 aa5.18□□□□□ -1.58
PTCSC3-201ENST00000556013 LGALSLQ3ZCW2 172 aaPredicted RBP5.18□□□□□ -1.58
PTCSC3-201ENST00000556013 C4orf48Q5BLP8 95 aa5.18□□□□□ -1.58
PTCSC3-201ENST00000556013 AKR1C8PQ5T2L2 129 aa5.18□□□□□ -1.58
PTCSC3-201ENST00000556013 RPL7L1Q6DKI1 246 aaKnown RBP5.18□□□□□ -1.58
PTCSC3-201ENST00000556013 RMI2Q96E14 147 aa5.18□□□□□ -1.58
PTCSC3-201ENST00000556013 IGHV3-73A0A0B4J1V6 119 aa5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 FAM74A7A6NL05 159 aa5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 B4DEV8 164 aa5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 KRBOX1C9JBD0 128 aa5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 PEX7O00628 323 aa5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 IGHV3-30P01768 117 aa5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 IGHV3-33P01772 117 aa5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 S100A9P06702 114 aaKnown RBP5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 ARMS2P0C7Q2 107 aa5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 IGHV3-30-3P0DP02 117 aa5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 IGHV3-30-5P0DP03 117 aa5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 FUSP35637 526 aaKnown RBP eCLIP5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 CRIP1P50238 77 aa5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 ZNF726P1Q15940 193 aa5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 ZNF674Q2M3X9 581 aa5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 Q5BKY6 102 aa5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 Q6ZSN1 163 aa5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 Q8N976 141 aa5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 STOML3Q8TAV4 291 aa5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 SFRP2Q96HF1 295 aa5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 FMC1Q96HJ9 113 aa5.17□□□□□ -1.58
PTCSC3-201ENST00000556013 TRAV34A0A0B4J273 112 aa5.16□□□□□ -1.58
PTCSC3-201ENST00000556013 GAGE12JA6NER3 117 aa5.16□□□□□ -1.58
PTCSC3-201ENST00000556013 SMR3BP02814 79 aaPredicted RBP5.16□□□□□ -1.58
PTCSC3-201ENST00000556013 CXCL1P09341 107 aa5.16□□□□□ -1.58
PTCSC3-201ENST00000556013 TPT1P13693 172 aaKnown RBP5.16□□□□□ -1.58
PTCSC3-201ENST00000556013 GAGE1Q13065 139 aa5.16□□□□□ -1.58
PTCSC3-201ENST00000556013 GAGE4Q13068 117 aa5.16□□□□□ -1.58
PTCSC3-201ENST00000556013 GAGE5Q13069 117 aa5.16□□□□□ -1.58
PTCSC3-201ENST00000556013 LINC01559Q495D7 138 aa5.16□□□□□ -1.58
PTCSC3-201ENST00000556013 GAGE13Q4V321 117 aa5.16□□□□□ -1.58
PTCSC3-201ENST00000556013 FAM162BQ5T6X4 162 aa5.16□□□□□ -1.58
PTCSC3-201ENST00000556013 Q6ZSA8 131 aa5.16□□□□□ -1.58
PTCSC3-201ENST00000556013 NIT1Q86X76 327 aa5.16□□□□□ -1.58
PTCSC3-201ENST00000556013 OR11H4Q8NGC9 324 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms