RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 SPINK4O60575 86 aa8.92□□□□□ -0.98
SHMT2-221ENST00000555773 RNF212Q495C1 297 aa8.92□□□□□ -0.98
SHMT2-221ENST00000555773 PIK3CD-AS1Q5SR53 167 aa8.92□□□□□ -0.98
SHMT2-221ENST00000555773 FER1L6-AS1Q8NA97 138 aa8.92□□□□□ -0.98
SHMT2-221ENST00000555773 CLRN3Q8NCR9 226 aa8.92□□□□□ -0.98
SHMT2-221ENST00000555773 RASL10AQ92737 203 aa8.92□□□□□ -0.98
SHMT2-221ENST00000555773 NDUFAF3Q9BU61 184 aa8.92□□□□□ -0.98
SHMT2-221ENST00000555773 CTDSP1Q9GZU7 261 aa8.92□□□□□ -0.98
SHMT2-221ENST00000555773 DKK2Q9UBU2 259 aa8.92□□□□□ -0.98
SHMT2-221ENST00000555773 H3BVH4 76 aa8.91□□□□□ -0.98
SHMT2-221ENST00000555773 SNAI2O43623 268 aa8.91□□□□□ -0.98
SHMT2-221ENST00000555773 SNAPINO95295 136 aa8.91□□□□□ -0.98
SHMT2-221ENST00000555773 IGLC6P0CF74 106 aa8.91□□□□□ -0.98
SHMT2-221ENST00000555773 GZMBP10144 247 aa8.91□□□□□ -0.98
SHMT2-221ENST00000555773 RHEBQ15382 184 aa8.91□□□□□ -0.98
SHMT2-221ENST00000555773 FAM222AQ5U5X8 452 aa8.91□□□□□ -0.98
SHMT2-221ENST00000555773 WDR73Q6P4I2 378 aa8.91□□□□□ -0.98
SHMT2-221ENST00000555773 PHLDA3Q9Y5J5 127 aa8.91□□□□□ -0.98
SHMT2-221ENST00000555773 TENM3Q9P273 2699 aa8.9□□□□□ -0.98
SHMT2-221ENST00000555773 A0A087WWC5 75 aa8.9□□□□□ -0.98
SHMT2-221ENST00000555773 CACNG7P62955 275 aa8.9□□□□□ -0.98
SHMT2-221ENST00000555773 ZNF876PQ49A33 203 aa8.9□□□□□ -0.98
SHMT2-221ENST00000555773 LINC00612Q8N6U2 182 aa8.9□□□□□ -0.98
SHMT2-221ENST00000555773 SYT8Q8NBV8 401 aa8.9□□□□□ -0.98
SHMT2-221ENST00000555773 C11orf45Q8TAV5 145 aa8.9□□□□□ -0.98
SHMT2-221ENST00000555773 TMEM242Q9NWH2 141 aa8.9□□□□□ -0.98
SHMT2-221ENST00000555773 STAB2Q8WWQ8 2551 aa8.89□□□□□ -0.99
SHMT2-221ENST00000555773 TRGV1A0A0A0MS02 117 aa8.89□□□□□ -0.99
SHMT2-221ENST00000555773 SMIM27A0A1W2PRY6 76 aa8.89□□□□□ -0.99
SHMT2-221ENST00000555773 C7orf77A4D0Y5 90 aa8.89□□□□□ -0.99
SHMT2-221ENST00000555773 LYZL1Q6UWQ5 148 aa8.89□□□□□ -0.99
SHMT2-221ENST00000555773 ZFP82Q8N141 532 aa8.89□□□□□ -0.99
SHMT2-221ENST00000555773 GTSF1Q8WW33 167 aa8.89□□□□□ -0.99
SHMT2-221ENST00000555773 C18orf15Q96N68 181 aa8.89□□□□□ -0.99
SHMT2-221ENST00000555773 IMMP2LQ96T52 175 aa8.89□□□□□ -0.99
SHMT2-221ENST00000555773 TPPP3Q9BW30 176 aa8.89□□□□□ -0.99
SHMT2-221ENST00000555773 EDA2RQ9HAV5 297 aa8.89□□□□□ -0.99
SHMT2-221ENST00000555773 NAT8BQ9UHF3 227 aa8.89□□□□□ -0.99
SHMT2-221ENST00000555773 IGHV4-4A0A075B6R2 117 aa8.88□□□□□ -0.99
SHMT2-221ENST00000555773 HIGD1CA8MV81 97 aa8.88□□□□□ -0.99
SHMT2-221ENST00000555773 DEFB130BP0DP73 79 aa8.88□□□□□ -0.99
SHMT2-221ENST00000555773 DEFB130AP0DP74 79 aa8.88□□□□□ -0.99
SHMT2-221ENST00000555773 DAD1P61803 113 aa8.88□□□□□ -0.99
SHMT2-221ENST00000555773 SPANXN1Q5VSR9 72 aa8.88□□□□□ -0.99
SHMT2-221ENST00000555773 DMRTA1Q5VZB9 504 aa8.88□□□□□ -0.99
SHMT2-221ENST00000555773 Q6ZTI0 123 aa8.88□□□□□ -0.99
SHMT2-221ENST00000555773 CNFNQ9BYD5 112 aa8.88□□□□□ -0.99
SHMT2-221ENST00000555773 TRGV2A0A075B6R0 118 aa8.87□□□□□ -0.99
SHMT2-221ENST00000555773 GAGE12BA1L429 117 aa8.87□□□□□ -0.99
SHMT2-221ENST00000555773 M0R381 172 aa8.87□□□□□ -0.99
SHMT2-221ENST00000555773 CIDEAO60543 219 aa8.87□□□□□ -0.99
SHMT2-221ENST00000555773 GAGE7O76087 117 aa8.87□□□□□ -0.99
SHMT2-221ENST00000555773 NXPH4O95158 308 aa8.87□□□□□ -0.99
SHMT2-221ENST00000555773 GAGE12FP0CL80 117 aa8.87□□□□□ -0.99
SHMT2-221ENST00000555773 GAGE12GP0CL81 117 aa8.87□□□□□ -0.99
SHMT2-221ENST00000555773 GAGE12IP0CL82 117 aa8.87□□□□□ -0.99
SHMT2-221ENST00000555773 CTRLP40313 264 aa8.87□□□□□ -0.99
SHMT2-221ENST00000555773 C12orf74Q32Q52 190 aa8.87□□□□□ -0.99
SHMT2-221ENST00000555773 OR10AG1Q8NH19 301 aa8.87□□□□□ -0.99
SHMT2-221ENST00000555773 BORCS7Q96B45 105 aa8.87□□□□□ -0.99
SHMT2-221ENST00000555773 PGLYRP4Q96LB8 373 aa8.87□□□□□ -0.99
SHMT2-221ENST00000555773 RPS10P5Q9NQ39 176 aa8.87□□□□□ -0.99
SHMT2-221ENST00000555773 MRPL16Q9NX20 251 aaKnown RBP8.87□□□□□ -0.99
SHMT2-221ENST00000555773 CELA1Q9UNI1 258 aa8.87□□□□□ -0.99
SHMT2-221ENST00000555773 A0A1B0GUT8 65 aa8.86□□□□□ -0.99
SHMT2-221ENST00000555773 A8MWV9 139 aa8.86□□□□□ -0.99
SHMT2-221ENST00000555773 NUP35Q8NFH5 326 aa8.86□□□□□ -0.99
SHMT2-221ENST00000555773 RS1O15537 224 aa8.85□□□□□ -0.99
SHMT2-221ENST00000555773 NTF3P20783 257 aa8.85□□□□□ -0.99
SHMT2-221ENST00000555773 KCNIP4Q6PIL6 250 aa8.85□□□□□ -0.99
SHMT2-221ENST00000555773 COL7A1Q02388 2944 aa8.85□□□□□ -0.99
SHMT2-221ENST00000555773 TRAV4A0A0B4J268 109 aa8.84□□□□□ -0.99
SHMT2-221ENST00000555773 MUC21A0A0G2JKD1 596 aa8.84□□□□□ -0.99
SHMT2-221ENST00000555773 MUC21A0A140T8X8 626 aa8.84□□□□□ -0.99
SHMT2-221ENST00000555773 A0A1B0GW15 77 aa8.84□□□□□ -0.99
SHMT2-221ENST00000555773 ATP5G1P05496 136 aa8.84□□□□□ -0.99
SHMT2-221ENST00000555773 S100A1P23297 94 aa8.84□□□□□ -0.99
SHMT2-221ENST00000555773 S100PP25815 95 aa8.84□□□□□ -0.99
SHMT2-221ENST00000555773 NANOS2P60321 138 aaKnown RBP8.84□□□□□ -0.99
SHMT2-221ENST00000555773 RIGQ13278 110 aa8.84□□□□□ -0.99
SHMT2-221ENST00000555773 TWIST1Q15672 202 aa8.84□□□□□ -0.99
SHMT2-221ENST00000555773 OR4C5Q8NGB2 326 aa8.84□□□□□ -0.99
SHMT2-221ENST00000555773 TRAV9-1A0A075B6T8 112 aa8.83□□□□□ -1
SHMT2-221ENST00000555773 TRGC1P0CF51 173 aa8.83□□□□□ -1
SHMT2-221ENST00000555773 FAM3BP58499 235 aaPredicted RBP8.83□□□□□ -1
SHMT2-221ENST00000555773 SSTP61278 116 aa8.83□□□□□ -1
SHMT2-221ENST00000555773 CFAP126Q5VTH2 177 aa8.83□□□□□ -1
SHMT2-221ENST00000555773 ZFP2Q6ZN57 461 aa8.83□□□□□ -1
SHMT2-221ENST00000555773 POM121L12Q8N7R1 296 aa8.83□□□□□ -1
SHMT2-221ENST00000555773 BTF3L4Q96K17 158 aa8.83□□□□□ -1
SHMT2-221ENST00000555773 MSRB1Q9NZV6 116 aa8.83□□□□□ -1
SHMT2-221ENST00000555773 RHODO00212 210 aa8.82□□□□□ -1
SHMT2-221ENST00000555773 S100A8P05109 93 aa8.82□□□□□ -1
SHMT2-221ENST00000555773 CRYGDP07320 174 aa8.82□□□□□ -1
SHMT2-221ENST00000555773 SLAQ13239 276 aa8.82□□□□□ -1
SHMT2-221ENST00000555773 Q6ZTC4 211 aa8.82□□□□□ -1
SHMT2-221ENST00000555773 SMIM15Q7Z3B0 74 aa8.82□□□□□ -1
SHMT2-221ENST00000555773 ATP5L2Q7Z4Y8 100 aa8.82□□□□□ -1
SHMT2-221ENST00000555773 AP1S3Q96PC3 154 aa8.82□□□□□ -1
SHMT2-221ENST00000555773 TGP01266 2768 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms