RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 AKAP6Q13023 2319 aa-0.27□□□□□ -2.45
SRP54-207ENST00000555535 MYO7BQ6PIF6 2116 aa-0.28□□□□□ -2.45
SRP54-207ENST00000555535 FLNCQ14315 2725 aa-0.28□□□□□ -2.45
SRP54-207ENST00000555535 A2MP01023 1474 aa-0.28□□□□□ -2.45
SRP54-207ENST00000555535 GVQW2A0A096LPI5 108 aaPredicted RBP-0.28□□□□□ -2.45
SRP54-207ENST00000555535 TEX49A0A1B0GTD5 131 aa-0.28□□□□□ -2.45
SRP54-207ENST00000555535 PFDN1O60925 122 aa-0.28□□□□□ -2.45
SRP54-207ENST00000555535 E2F6O75461 281 aa-0.28□□□□□ -2.45
SRP54-207ENST00000555535 IFNA21P01568 189 aa-0.28□□□□□ -2.45
SRP54-207ENST00000555535 TCRAP04437 139 aa-0.28□□□□□ -2.45
SRP54-207ENST00000555535 SLC25A5P05141 298 aaKnown RBP-0.28□□□□□ -2.45
SRP54-207ENST00000555535 COX4I1P13073 169 aa-0.28□□□□□ -2.45
SRP54-207ENST00000555535 ACYP2P14621 99 aa-0.28□□□□□ -2.45
SRP54-207ENST00000555535 RPL7P18124 248 aaKnown RBP-0.28□□□□□ -2.45
SRP54-207ENST00000555535 SRP9P49458 86 aaKnown RBP-0.28□□□□□ -2.45
SRP54-207ENST00000555535 CYP2G1PQ6ZSU1 146 aa-0.28□□□□□ -2.45
SRP54-207ENST00000555535 NAT14Q8WUY8 206 aa-0.28□□□□□ -2.45
SRP54-207ENST00000555535 PPP1R1CQ8WVI7 109 aa-0.28□□□□□ -2.45
SRP54-207ENST00000555535 MUC22E2RYF6 1773 aaPredicted RBP-0.28□□□□□ -2.45
SRP54-207ENST00000555535 KIAA0100Q14667 2235 aaKnown RBP-0.28□□□□□ -2.45
SRP54-207ENST00000555535 WDR97A6NE52 1622 aa-0.28□□□□□ -2.45
SRP54-207ENST00000555535 CDK13Q14004 1512 aaKnown RBP-0.28□□□□□ -2.45
SRP54-207ENST00000555535 PLXNB2O15031 1838 aa-0.29□□□□□ -2.46
SRP54-207ENST00000555535 PBRM1Q86U86 1689 aa-0.29□□□□□ -2.46
SRP54-207ENST00000555535 SPTBN2O15020 2390 aa-0.29□□□□□ -2.46
SRP54-207ENST00000555535 TRAV12-2A0A075B6T6 113 aa-0.29□□□□□ -2.46
SRP54-207ENST00000555535 A0A1B0GW64 132 aa-0.29□□□□□ -2.46
SRP54-207ENST00000555535 A0A1W2PRE2 83 aa-0.29□□□□□ -2.46
SRP54-207ENST00000555535 TMEM238C9JI98 176 aa-0.29□□□□□ -2.46
SRP54-207ENST00000555535 MCRIP1C9JLW8 97 aa-0.29□□□□□ -2.46
SRP54-207ENST00000555535 OR2H2O95918 312 aa-0.29□□□□□ -2.46
SRP54-207ENST00000555535 GNG10P50151 68 aa-0.29□□□□□ -2.46
SRP54-207ENST00000555535 AKR1D1P51857 326 aa-0.29□□□□□ -2.46
SRP54-207ENST00000555535 EMX2Q04743 252 aa-0.29□□□□□ -2.46
SRP54-207ENST00000555535 Q5XG85 94 aa-0.29□□□□□ -2.46
SRP54-207ENST00000555535 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.29□□□□□ -2.46
SRP54-207ENST00000555535 THEM6Q8WUY1 208 aa-0.29□□□□□ -2.46
SRP54-207ENST00000555535 SLC35B3Q9H1N7 401 aa-0.29□□□□□ -2.46
SRP54-207ENST00000555535 NDUFAF1Q9Y375 327 aa-0.29□□□□□ -2.46
SRP54-207ENST00000555535 WNK3Q9BYP7 1800 aa-0.29□□□□□ -2.46
SRP54-207ENST00000555535 HSPG2P98160 4391 aa-0.29□□□□□ -2.46
SRP54-207ENST00000555535 PTPRGP23470 1445 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 EIF3AQ14152 1382 aaKnown RBP-0.3□□□□□ -2.46
SRP54-207ENST00000555535 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.3□□□□□ -2.46
SRP54-207ENST00000555535 TNXBP22105 4242 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 TRBV7-1A0A0A6YYK4 115 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 TRBV7-6A0A0J9YX20 115 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 PNMA8CA0A1B0GUJ8 204 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 RBAKDNA6NC62 111 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 E7EQ34 232 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 UQCRQO14949 82 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 SLC25A6P12236 298 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 HIST1H1BP16401 226 aaKnown RBP-0.3□□□□□ -2.46
SRP54-207ENST00000555535 GCHFRP30047 84 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 RPL22P35268 128 aaKnown RBP-0.3□□□□□ -2.46
SRP54-207ENST00000555535 POLR2HP52434 150 aaKnown RBP-0.3□□□□□ -2.46
SRP54-207ENST00000555535 PSPHP78330 225 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 HSD17B12Q53GQ0 312 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 TMEM78Q5T7P6 136 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 PPP1R2P3Q6NXS1 205 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 SLC25A26Q70HW3 274 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 SNX29P2Q8IUI4 249 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 C4orf33Q8N1A6 199 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 IFI27L1Q96BM0 104 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 PCBD2Q9H0N5 130 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 TMEM242Q9NWH2 141 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 CALML5Q9NZT1 146 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 USF3Q68DE3 2245 aa-0.3□□□□□ -2.46
SRP54-207ENST00000555535 PPRC1Q5VV67 1664 aaKnown RBP-0.3□□□□□ -2.46
SRP54-207ENST00000555535 C2CD3Q4AC94 2353 aa-0.31□□□□□ -2.46
SRP54-207ENST00000555535 CSPG4Q6UVK1 2322 aa-0.31□□□□□ -2.46
SRP54-207ENST00000555535 SPEF2Q9C093 1822 aa-0.31□□□□□ -2.46
SRP54-207ENST00000555535 SIPA1L3O60292 1781 aaPredicted RBP-0.31□□□□□ -2.46
SRP54-207ENST00000555535 ZNF815PA8K554 130 aa-0.31□□□□□ -2.46
SRP54-207ENST00000555535 FAM107AO95990 144 aa-0.31□□□□□ -2.46
SRP54-207ENST00000555535 MT-ND4LP03901 98 aa-0.31□□□□□ -2.46
SRP54-207ENST00000555535 PLGLB1Q02325 96 aa-0.31□□□□□ -2.46
SRP54-207ENST00000555535 DEFB109BQ30KR1 87 aa-0.31□□□□□ -2.46
SRP54-207ENST00000555535 FAM74A4Q5TZK3 123 aa-0.31□□□□□ -2.46
SRP54-207ENST00000555535 SSBP3-AS1Q7Z2R9 100 aa-0.31□□□□□ -2.46
SRP54-207ENST00000555535 UBE2DNLQ8IWF7 75 aa-0.31□□□□□ -2.46
SRP54-207ENST00000555535 C20orf197Q8N268 126 aa-0.31□□□□□ -2.46
SRP54-207ENST00000555535 CCDC115Q96NT0 180 aa-0.31□□□□□ -2.46
SRP54-207ENST00000555535 BANF2Q9H503 90 aa-0.31□□□□□ -2.46
SRP54-207ENST00000555535 PRO0255Q9UI72 69 aa-0.31□□□□□ -2.46
SRP54-207ENST00000555535 NOP16Q9Y3C1 178 aaKnown RBP-0.31□□□□□ -2.46
SRP54-207ENST00000555535 IFT172Q9UG01 1749 aa-0.31□□□□□ -2.46
SRP54-207ENST00000555535 NHSL1Q5SYE7 1610 aa-0.31□□□□□ -2.46
SRP54-207ENST00000555535 BIVM-ERCC5R4GMW8 1640 aa-0.31□□□□□ -2.46
SRP54-207ENST00000555535 TSC2P49815 1807 aa-0.31□□□□□ -2.46
SRP54-207ENST00000555535 LAMB1P07942 1786 aa-0.32□□□□□ -2.46
SRP54-207ENST00000555535 CCDC171Q6TFL3 1326 aa-0.32□□□□□ -2.46
SRP54-207ENST00000555535 CXorf51AA0A1B0GTR3 108 aa-0.32□□□□□ -2.46
SRP54-207ENST00000555535 M0R3E3 92 aa-0.32□□□□□ -2.46
SRP54-207ENST00000555535 PAEPP09466 180 aa-0.32□□□□□ -2.46
SRP54-207ENST00000555535 NPC2P61916 151 aa-0.32□□□□□ -2.46
SRP54-207ENST00000555535 SPAG11BQ08648 103 aa-0.32□□□□□ -2.46
SRP54-207ENST00000555535 CLLU1Q5K131 121 aa-0.32□□□□□ -2.46
SRP54-207ENST00000555535 SAMD13Q5VXD3 122 aa-0.32□□□□□ -2.46
SRP54-207ENST00000555535 OR2T2Q6IF00 324 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms