RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 MUC4Q99102 2169 aa18.15■□□□□ 0.5
TMEM260-207ENST00000555497 MYO9AB2RTY4 2548 aa18.15■□□□□ 0.5
TMEM260-207ENST00000555497 CCDC168Q8NDH2 2452 aa18.14■□□□□ 0.49
TMEM260-207ENST00000555497 LEPP41159 167 aa18.14■□□□□ 0.49
TMEM260-207ENST00000555497 PCP4P48539 62 aa18.14■□□□□ 0.49
TMEM260-207ENST00000555497 IFI27L1Q96BM0 104 aa18.14■□□□□ 0.49
TMEM260-207ENST00000555497 SLURP1P55000 103 aa18.13■□□□□ 0.49
TMEM260-207ENST00000555497 UBE2V1Q13404 147 aa18.13■□□□□ 0.49
TMEM260-207ENST00000555497 Q8N8P6 123 aa18.13■□□□□ 0.49
TMEM260-207ENST00000555497 PHLDA3Q9Y5J5 127 aa18.13■□□□□ 0.49
TMEM260-207ENST00000555497 HIST2H2BDQ6DRA6 164 aa18.13■□□□□ 0.49
TMEM260-207ENST00000555497 A0A0J9YX75 114 aa18.12■□□□□ 0.49
TMEM260-207ENST00000555497 FCER1GP30273 86 aa18.12■□□□□ 0.49
TMEM260-207ENST00000555497 TCTEX1D4Q5JR98 221 aa18.12■□□□□ 0.49
TMEM260-207ENST00000555497 PRSS47A8MTI9 375 aa18.11■□□□□ 0.49
TMEM260-207ENST00000555497 IGKV3-20P01619 116 aa18.11■□□□□ 0.49
TMEM260-207ENST00000555497 MED14OSP0DP75 135 aa18.11■□□□□ 0.49
TMEM260-207ENST00000555497 TRAV12-3A0A0B4J271 114 aa18.11■□□□□ 0.49
TMEM260-207ENST00000555497 HSBP1L1C9JCN9 74 aa18.11■□□□□ 0.49
TMEM260-207ENST00000555497 SNRPD3P62318 126 aaKnown RBP18.11■□□□□ 0.49
TMEM260-207ENST00000555497 C14orf178Q8N769 122 aaPredicted RBP18.11■□□□□ 0.49
TMEM260-207ENST00000555497 C18orf15Q96N68 181 aa18.11■□□□□ 0.49
TMEM260-207ENST00000555497 FLNAP21333 2647 aaKnown RBP18.11■□□□□ 0.49
TMEM260-207ENST00000555497 LGALS9BQ3B8N2 356 aa18.1■□□□□ 0.49
TMEM260-207ENST00000555497 LGALS9CQ6DKI2 356 aa18.1■□□□□ 0.49
TMEM260-207ENST00000555497 Q6ZVH6 145 aa18.1■□□□□ 0.49
TMEM260-207ENST00000555497 C21orf62-AS1Q17RA5 79 aa18.1■□□□□ 0.49
TMEM260-207ENST00000555497 DEFB125Q8N687 156 aa18.1■□□□□ 0.49
TMEM260-207ENST00000555497 DUX3Q96PT4 197 aa18.1■□□□□ 0.49
TMEM260-207ENST00000555497 PDZD2O15018 2839 aa18.09■□□□□ 0.49
TMEM260-207ENST00000555497 TMEM158Q8WZ71 300 aa18.09■□□□□ 0.49
TMEM260-207ENST00000555497 MRAP2Q96G30 205 aa18.09■□□□□ 0.49
TMEM260-207ENST00000555497 TRAV12-2A0A075B6T6 113 aa18.08■□□□□ 0.48
TMEM260-207ENST00000555497 RNASE8Q8TDE3 154 aaKnown RBP18.08■□□□□ 0.48
TMEM260-207ENST00000555497 C7orf71A4D174 169 aa18.07■□□□□ 0.48
TMEM260-207ENST00000555497 FAM159AQ6UWV7 190 aa18.07■□□□□ 0.48
TMEM260-207ENST00000555497 DPH3P1Q9H4G8 78 aa18.07■□□□□ 0.48
TMEM260-207ENST00000555497 K7EP13 123 aa18.07■□□□□ 0.48
TMEM260-207ENST00000555497 CD5LO43866 347 aa18.07■□□□□ 0.48
TMEM260-207ENST00000555497 RASL10AQ92737 203 aa18.07■□□□□ 0.48
TMEM260-207ENST00000555497 PLA2G2AP14555 144 aa18.06■□□□□ 0.48
TMEM260-207ENST00000555497 ODF3Q96PU9 254 aa18.06■□□□□ 0.48
TMEM260-207ENST00000555497 KMT2BQ9UMN6 2715 aaPredicted RBP18.06■□□□□ 0.48
TMEM260-207ENST00000555497 NXPH4O95158 308 aa18.06■□□□□ 0.48
TMEM260-207ENST00000555497 RBX1P62877 108 aa18.06■□□□□ 0.48
TMEM260-207ENST00000555497 SLC25A34Q6PIV7 304 aa18.05■□□□□ 0.48
TMEM260-207ENST00000555497 OR11H1Q8NG94 326 aa18.05■□□□□ 0.48
TMEM260-207ENST00000555497 RPL39LQ96EH5 51 aaKnown RBP18.05■□□□□ 0.48
TMEM260-207ENST00000555497 DKK2Q9UBU2 259 aa18.05■□□□□ 0.48
TMEM260-207ENST00000555497 ANKRD39Q53RE8 183 aa18.04■□□□□ 0.48
TMEM260-207ENST00000555497 Q6ZSV7 163 aa18.04■□□□□ 0.48
TMEM260-207ENST00000555497 LINC01619G3V211 115 aa18.04■□□□□ 0.48
TMEM260-207ENST00000555497 CD7P09564 240 aa18.04■□□□□ 0.48
TMEM260-207ENST00000555497 AKAP9Q99996 3911 aa18.03■□□□□ 0.48
TMEM260-207ENST00000555497 MGPP08493 103 aa18.03■□□□□ 0.48
TMEM260-207ENST00000555497 LAGE3Q14657 143 aa18.03■□□□□ 0.48
TMEM260-207ENST00000555497 SPINK13Q1W4C9 94 aa18.03■□□□□ 0.48
TMEM260-207ENST00000555497 TMEM86BQ8N661 226 aa18.03■□□□□ 0.48
TMEM260-207ENST00000555497 JPT2Q9H910 190 aa18.03■□□□□ 0.48
TMEM260-207ENST00000555497 DNAJC9-AS1A6NH13 148 aa18.03■□□□□ 0.48
TMEM260-207ENST00000555497 C4orf3Q8WVX3 66 aa18.03■□□□□ 0.48
TMEM260-207ENST00000555497 DPF1Q92782 380 aa18.03■□□□□ 0.48
TMEM260-207ENST00000555497 KIF25-AS1Q9Y6Z4 181 aa18.03■□□□□ 0.48
TMEM260-207ENST00000555497 SMIM17P0DL12 118 aa18.02■□□□□ 0.48
TMEM260-207ENST00000555497 LINC00315P59091 139 aa18.02■□□□□ 0.48
TMEM260-207ENST00000555497 KHDC1LQ5JSQ8 128 aa18.02■□□□□ 0.48
TMEM260-207ENST00000555497 SMIM2Q9BVW6 85 aa18.02■□□□□ 0.48
TMEM260-207ENST00000555497 KRTAP1-1Q07627 177 aa18.02■□□□□ 0.47
TMEM260-207ENST00000555497 AP1S3Q96PC3 154 aa18.02■□□□□ 0.47
TMEM260-207ENST00000555497 ESM1Q9NQ30 184 aa18.02■□□□□ 0.47
TMEM260-207ENST00000555497 AMTNQ6UX39 209 aa18.01■□□□□ 0.47
TMEM260-207ENST00000555497 OR1N2Q8NGR9 330 aa18.01■□□□□ 0.47
TMEM260-207ENST00000555497 NF1P21359 2839 aa18.01■□□□□ 0.47
TMEM260-207ENST00000555497 CDKN1BP46527 198 aa18■□□□□ 0.47
TMEM260-207ENST00000555497 J3QKU1 62 aa18■□□□□ 0.47
TMEM260-207ENST00000555497 COX8AP10176 69 aa18■□□□□ 0.47
TMEM260-207ENST00000555497 TCTAP57738 103 aa18■□□□□ 0.47
TMEM260-207ENST00000555497 FOXI2Q6ZQN5 318 aa18■□□□□ 0.47
TMEM260-207ENST00000555497 DLX4Q92988 240 aaPredicted RBP18■□□□□ 0.47
TMEM260-207ENST00000555497 MDFICQ9P1T7 246 aa18■□□□□ 0.47
TMEM260-207ENST00000555497 ACANP16112 2415 aa18■□□□□ 0.47
TMEM260-207ENST00000555497 ITPR2Q14571 2701 aa18■□□□□ 0.47
TMEM260-207ENST00000555497 HELZ2Q9BYK8 2649 aaKnown RBP18■□□□□ 0.47
TMEM260-207ENST00000555497 IGHV3-16A0A0C4DH30 117 aa17.99■□□□□ 0.47
TMEM260-207ENST00000555497 SUMO2P61956 95 aaKnown RBP17.99■□□□□ 0.47
TMEM260-207ENST00000555497 ODF1Q14990 250 aa17.99■□□□□ 0.47
TMEM260-207ENST00000555497 POM121L12Q8N7R1 296 aa17.99■□□□□ 0.47
TMEM260-207ENST00000555497 OR9G4Q8NGQ1 327 aa17.99■□□□□ 0.47
TMEM260-207ENST00000555497 MPV17L2Q567V2 206 aa17.99■□□□□ 0.47
TMEM260-207ENST00000555497 KLHL30-AS1Q8NEE0 82 aa17.99■□□□□ 0.47
TMEM260-207ENST00000555497 KNCNA6PVL3 124 aa17.98■□□□□ 0.47
TMEM260-207ENST00000555497 DUSP14O95147 198 aaKnown RBP17.98■□□□□ 0.47
TMEM260-207ENST00000555497 OR4C5Q8NGB2 326 aa17.98■□□□□ 0.47
TMEM260-207ENST00000555497 PRSS1P07477 247 aa17.98■□□□□ 0.47
TMEM260-207ENST00000555497 Q8N1Y9 231 aa17.98■□□□□ 0.47
TMEM260-207ENST00000555497 C9orf85Q96MD7 179 aa17.98■□□□□ 0.47
TMEM260-207ENST00000555497 CUBNO60494 3623 aa17.97■□□□□ 0.47
TMEM260-207ENST00000555497 TMEM61Q8N0U2 210 aa17.97■□□□□ 0.47
TMEM260-207ENST00000555497 C20orf78Q9BR46 151 aa17.97■□□□□ 0.47
TMEM260-207ENST00000555497 FGF6P10767 208 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms