RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 C5orf17Q8NAS9 161 aa1.99□□□□□ -2.09
VRK1-205ENST00000555402 CASZ1Q86V15 1759 aa1.99□□□□□ -2.09
VRK1-205ENST00000555402 CR1P17927 2039 aa1.98□□□□□ -2.09
VRK1-205ENST00000555402 SNCGO76070 127 aa1.98□□□□□ -2.09
VRK1-205ENST00000555402 NDUFB6O95139 128 aa1.98□□□□□ -2.09
VRK1-205ENST00000555402 PIRTP0C851 137 aa1.98□□□□□ -2.09
VRK1-205ENST00000555402 PIPP12273 146 aaPredicted RBP1.98□□□□□ -2.09
VRK1-205ENST00000555402 C10orf55Q5SWW7 151 aa1.98□□□□□ -2.09
VRK1-205ENST00000555402 SPANXN1Q5VSR9 72 aa1.98□□□□□ -2.09
VRK1-205ENST00000555402 C4orf3Q8WVX3 66 aa1.98□□□□□ -2.09
VRK1-205ENST00000555402 LINC00052Q96N35 136 aa1.98□□□□□ -2.09
VRK1-205ENST00000555402 ORMDL1Q9P0S3 153 aa1.98□□□□□ -2.09
VRK1-205ENST00000555402 ROBO1Q9Y6N7 1651 aa1.98□□□□□ -2.09
VRK1-205ENST00000555402 EML5Q05BV3 1969 aa1.98□□□□□ -2.09
VRK1-205ENST00000555402 SPHKAPQ2M3C7 1700 aa1.97□□□□□ -2.09
VRK1-205ENST00000555402 PLXNA2O75051 1894 aa1.97□□□□□ -2.09
VRK1-205ENST00000555402 PTPRMP28827 1452 aa1.97□□□□□ -2.09
VRK1-205ENST00000555402 CECR2Q9BXF3 1484 aa1.97□□□□□ -2.09
VRK1-205ENST00000555402 A0A1W2PRS3 328 aa1.97□□□□□ -2.09
VRK1-205ENST00000555402 F8W1H4 67 aa1.97□□□□□ -2.09
VRK1-205ENST00000555402 SPINK8P0C7L1 97 aa1.97□□□□□ -2.09
VRK1-205ENST00000555402 IFITM1P13164 125 aa1.97□□□□□ -2.09
VRK1-205ENST00000555402 COX7CP15954 63 aa1.97□□□□□ -2.09
VRK1-205ENST00000555402 POLR2JP52435 117 aaKnown RBP1.97□□□□□ -2.09
VRK1-205ENST00000555402 NPC2P61916 151 aa1.97□□□□□ -2.09
VRK1-205ENST00000555402 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.97□□□□□ -2.09
VRK1-205ENST00000555402 OR10AG1Q8NH19 301 aa1.97□□□□□ -2.09
VRK1-205ENST00000555402 PATE1Q8WXA2 126 aa1.97□□□□□ -2.09
VRK1-205ENST00000555402 LINC00526Q96FQ7 95 aa1.97□□□□□ -2.09
VRK1-205ENST00000555402 PRDM2Q13029 1718 aa1.97□□□□□ -2.09
VRK1-205ENST00000555402 CEP192Q8TEP8 1941 aa1.96□□□□□ -2.1
VRK1-205ENST00000555402 TRAV2A0A0B4J234 112 aa1.96□□□□□ -2.1
VRK1-205ENST00000555402 OOSP1A8MZH6 123 aa1.96□□□□□ -2.1
VRK1-205ENST00000555402 GYPBP06028 91 aa1.96□□□□□ -2.1
VRK1-205ENST00000555402 IL7P13232 177 aa1.96□□□□□ -2.1
VRK1-205ENST00000555402 FAM74A1Q5RGS3 127 aa1.96□□□□□ -2.1
VRK1-205ENST00000555402 S100A7L2Q5SY68 101 aa1.96□□□□□ -2.1
VRK1-205ENST00000555402 C12orf73Q69YU5 71 aa1.96□□□□□ -2.1
VRK1-205ENST00000555402 UNQ5815/PRO19632Q6UWF5 114 aa1.96□□□□□ -2.1
VRK1-205ENST00000555402 DEFB119Q8N690 84 aa1.96□□□□□ -2.1
VRK1-205ENST00000555402 C10orf105Q8TEF2 133 aa1.96□□□□□ -2.1
VRK1-205ENST00000555402 RTTNQ86VV8 2226 aa1.96□□□□□ -2.1
VRK1-205ENST00000555402 ZFHX2Q9C0A1 2572 aaPredicted RBP1.96□□□□□ -2.1
VRK1-205ENST00000555402 RBBP6Q7Z6E9 1792 aaKnown RBP1.95□□□□□ -2.1
VRK1-205ENST00000555402 DAPK1P53355 1430 aa1.95□□□□□ -2.1
VRK1-205ENST00000555402 H3BRM9 83 aa1.95□□□□□ -2.1
VRK1-205ENST00000555402 CCL16O15467 120 aa1.95□□□□□ -2.1
VRK1-205ENST00000555402 CNBPP62633 177 aaKnown RBP1.95□□□□□ -2.1
VRK1-205ENST00000555402 TTC9CQ8N5M4 171 aa1.95□□□□□ -2.1
VRK1-205ENST00000555402 DSCR8Q96T75 97 aa1.95□□□□□ -2.1
VRK1-205ENST00000555402 NDUFA12Q9UI09 145 aa1.95□□□□□ -2.1
VRK1-205ENST00000555402 MCM3APO60318 1980 aa1.95□□□□□ -2.1
VRK1-205ENST00000555402 COL4A1P02462 1669 aa1.95□□□□□ -2.1
VRK1-205ENST00000555402 MUC4Q99102 2169 aa1.95□□□□□ -2.1
VRK1-205ENST00000555402 SIP14410 1827 aa1.94□□□□□ -2.1
VRK1-205ENST00000555402 RNASE3P12724 160 aaKnown RBP1.94□□□□□ -2.1
VRK1-205ENST00000555402 INSL4Q14641 139 aa1.94□□□□□ -2.1
VRK1-205ENST00000555402 COL5A1-AS1Q5SY13 56 aa1.94□□□□□ -2.1
VRK1-205ENST00000555402 SLC48A1Q6P1K1 146 aa1.94□□□□□ -2.1
VRK1-205ENST00000555402 Q8N8P6 123 aa1.94□□□□□ -2.1
VRK1-205ENST00000555402 TSKUQ8WUA8 353 aa1.94□□□□□ -2.1
VRK1-205ENST00000555402 PPDPFLQ8WWR9 84 aa1.94□□□□□ -2.1
VRK1-205ENST00000555402 SNHG12Q9BXW3 62 aa1.94□□□□□ -2.1
VRK1-205ENST00000555402 MUC22E2RYF6 1773 aaPredicted RBP1.94□□□□□ -2.1
VRK1-205ENST00000555402 ABCA3Q99758 1704 aa1.94□□□□□ -2.1
VRK1-205ENST00000555402 PTPRFP10586 1907 aa1.93□□□□□ -2.1
VRK1-205ENST00000555402 LAMB1P07942 1786 aa1.93□□□□□ -2.1
VRK1-205ENST00000555402 ARHGAP5Q13017 1502 aa1.93□□□□□ -2.1
VRK1-205ENST00000555402 TRBV6-4A0A1B0GX49 114 aa1.93□□□□□ -2.1
VRK1-205ENST00000555402 TMEM30CPA0ZSE6 113 aa1.93□□□□□ -2.1
VRK1-205ENST00000555402 FAM24AA6NFZ4 105 aa1.93□□□□□ -2.1
VRK1-205ENST00000555402 MPC2O95563 127 aa1.93□□□□□ -2.1
VRK1-205ENST00000555402 IGHV3-33P01772 117 aa1.93□□□□□ -2.1
VRK1-205ENST00000555402 IGKCP01834 107 aa1.93□□□□□ -2.1
VRK1-205ENST00000555402 SLC25A6P12236 298 aa1.93□□□□□ -2.1
VRK1-205ENST00000555402 RPL7L1Q6DKI1 246 aaKnown RBP1.93□□□□□ -2.1
VRK1-205ENST00000555402 TMEM141Q96I45 108 aa1.93□□□□□ -2.1
VRK1-205ENST00000555402 AQP10Q96PS8 301 aa1.93□□□□□ -2.1
VRK1-205ENST00000555402 LIMD2Q9BT23 127 aa1.93□□□□□ -2.1
VRK1-205ENST00000555402 REG4Q9BYZ8 158 aa1.93□□□□□ -2.1
VRK1-205ENST00000555402 CDC42SE1Q9NRR8 79 aa1.93□□□□□ -2.1
VRK1-205ENST00000555402 KLK9Q9UKQ9 250 aa1.93□□□□□ -2.1
VRK1-205ENST00000555402 TROQ12816 1431 aaPredicted RBP1.92□□□□□ -2.1
VRK1-205ENST00000555402 PHIPQ8WWQ0 1821 aa1.92□□□□□ -2.1
VRK1-205ENST00000555402 PVALEFA0A1B0GWK0 134 aa1.92□□□□□ -2.1
VRK1-205ENST00000555402 TFF1P04155 84 aa1.92□□□□□ -2.1
VRK1-205ENST00000555402 PRB1P04280 392 aa1.92□□□□□ -2.1
VRK1-205ENST00000555402 RHOHQ15669 191 aa1.92□□□□□ -2.1
VRK1-205ENST00000555402 IQCJQ1A5X6 159 aa1.92□□□□□ -2.1
VRK1-205ENST00000555402 BAZ1AQ9NRL2 1556 aaPredicted RBP1.92□□□□□ -2.1
VRK1-205ENST00000555402 FREM1Q5H8C1 2179 aa1.92□□□□□ -2.1
VRK1-205ENST00000555402 CPSF1Q10570 1443 aaKnown RBP1.91□□□□□ -2.1
VRK1-205ENST00000555402 SHROOM2Q13796 1616 aa1.91□□□□□ -2.1
VRK1-205ENST00000555402 HEATR5BQ9P2D3 2071 aa1.91□□□□□ -2.1
VRK1-205ENST00000555402 PCDH15Q96QU1 1955 aa1.91□□□□□ -2.1
VRK1-205ENST00000555402 TOPAZ1Q8N9V7 1692 aa1.91□□□□□ -2.1
VRK1-205ENST00000555402 CDK12Q9NYV4 1490 aaPredicted RBP1.91□□□□□ -2.1
VRK1-205ENST00000555402 PIGBOS1A0A0B4J2F0 54 aa1.91□□□□□ -2.1
VRK1-205ENST00000555402 TCRBV3S1A0A5B6 114 aa1.91□□□□□ -2.1
VRK1-205ENST00000555402 PPYP01298 95 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms