RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 FAM19A2Q8N3H0 131 aa7.32□□□□□ -1.24
PSEN1-213ENST00000555386 C8orf49Q96NF6 230 aa7.32□□□□□ -1.24
PSEN1-213ENST00000555386 IGKV2-40A0A087WW87 121 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-213ENST00000555386 CRXO43186 299 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-213ENST00000555386 IGKV2D-40P01614 121 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-213ENST00000555386 ARMS2P0C7Q2 107 aa7.31□□□□□ -1.24
PSEN1-213ENST00000555386 LINC00614P0C842 121 aa7.31□□□□□ -1.24
PSEN1-213ENST00000555386 PRB4P10163 310 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-213ENST00000555386 DEFB131AP59861 70 aa7.31□□□□□ -1.24
PSEN1-213ENST00000555386 ODF3L2Q3SX64 289 aa7.31□□□□□ -1.24
PSEN1-213ENST00000555386 URB1-AS1Q96HZ7 61 aa7.31□□□□□ -1.24
PSEN1-213ENST00000555386 MAP6D1Q9H9H5 199 aa7.31□□□□□ -1.24
PSEN1-213ENST00000555386 PAM16Q9Y3D7 125 aa7.31□□□□□ -1.24
PSEN1-213ENST00000555386 NBEAL2Q6ZNJ1 2754 aa7.31□□□□□ -1.24
PSEN1-213ENST00000555386 K7EQG2 157 aa7.3□□□□□ -1.24
PSEN1-213ENST00000555386 RPL35AP18077 110 aaKnown RBP7.3□□□□□ -1.24
PSEN1-213ENST00000555386 TDRG1Q3Y452 100 aa7.3□□□□□ -1.24
PSEN1-213ENST00000555386 PSMG4Q5JS54 123 aa7.3□□□□□ -1.24
PSEN1-213ENST00000555386 IGFL4Q6B9Z1 124 aa7.3□□□□□ -1.24
PSEN1-213ENST00000555386 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.3□□□□□ -1.24
PSEN1-213ENST00000555386 TMEM70Q9BUB7 260 aa7.3□□□□□ -1.24
PSEN1-213ENST00000555386 PPP1R14DQ9NXH3 145 aa7.3□□□□□ -1.24
PSEN1-213ENST00000555386 DEFB1P60022 68 aa7.3□□□□□ -1.24
PSEN1-213ENST00000555386 SSTP61278 116 aa7.3□□□□□ -1.24
PSEN1-213ENST00000555386 SPATA45Q537H7 98 aa7.3□□□□□ -1.24
PSEN1-213ENST00000555386 ZNF705AQ6ZN79 300 aaPredicted RBP7.3□□□□□ -1.24
PSEN1-213ENST00000555386 DCANP1Q8TF63 244 aa7.3□□□□□ -1.24
PSEN1-213ENST00000555386 C16orf92Q96LL3 132 aa7.3□□□□□ -1.24
PSEN1-213ENST00000555386 VGLL1Q99990 258 aa7.3□□□□□ -1.24
PSEN1-213ENST00000555386 C19orf73Q9NVV2 129 aa7.3□□□□□ -1.24
PSEN1-213ENST00000555386 UQCR10Q9UDW1 63 aa7.3□□□□□ -1.24
PSEN1-213ENST00000555386 U3KQK5 164 aa7.3□□□□□ -1.24
PSEN1-213ENST00000555386 COL7A1Q02388 2944 aa7.29□□□□□ -1.24
PSEN1-213ENST00000555386 IGHV1-24A0A0C4DH33 117 aa7.29□□□□□ -1.24
PSEN1-213ENST00000555386 RBMY1BA6NDE4 496 aaKnown RBP7.29□□□□□ -1.24
PSEN1-213ENST00000555386 RBMY1EA6NEQ0 496 aaKnown RBP7.29□□□□□ -1.24
PSEN1-213ENST00000555386 KNCNA6PVL3 124 aa7.29□□□□□ -1.24
PSEN1-213ENST00000555386 FABP5P3A8MUU1 101 aa7.29□□□□□ -1.24
PSEN1-213ENST00000555386 LEPROTL1O95214 131 aa7.29□□□□□ -1.24
PSEN1-213ENST00000555386 RBMY1DP0C7P1 496 aaKnown RBP7.29□□□□□ -1.24
PSEN1-213ENST00000555386 IGLC6P0CF74 106 aa7.29□□□□□ -1.24
PSEN1-213ENST00000555386 SNRPD3P62318 126 aaKnown RBP7.29□□□□□ -1.24
PSEN1-213ENST00000555386 FAM104BQ5XKR9 115 aa7.29□□□□□ -1.24
PSEN1-213ENST00000555386 EBLN2Q6P2I7 272 aa7.29□□□□□ -1.24
PSEN1-213ENST00000555386 LYZL1Q6UWQ5 148 aa7.29□□□□□ -1.24
PSEN1-213ENST00000555386 SBSPONQ8IVN8 264 aa7.29□□□□□ -1.24
PSEN1-213ENST00000555386 RNF182Q8N6D2 247 aa7.29□□□□□ -1.24
PSEN1-213ENST00000555386 LINC00469Q8N7U9 141 aa7.29□□□□□ -1.24
PSEN1-213ENST00000555386 SNHG12Q9BXW3 62 aa7.29□□□□□ -1.24
PSEN1-213ENST00000555386 CNFNQ9BYD5 112 aa7.29□□□□□ -1.24
PSEN1-213ENST00000555386 HSPB8Q9UJY1 196 aa7.29□□□□□ -1.24
PSEN1-213ENST00000555386 TRAV9-2A0A087WT02 112 aa7.28□□□□□ -1.24
PSEN1-213ENST00000555386 A0A1B0GV90 55 aa7.28□□□□□ -1.24
PSEN1-213ENST00000555386 IGKV3-20P01619 116 aa7.28□□□□□ -1.24
PSEN1-213ENST00000555386 IGLC3P0DOY3 106 aa7.28□□□□□ -1.24
PSEN1-213ENST00000555386 HLA-DMBP28068 263 aa7.28□□□□□ -1.24
PSEN1-213ENST00000555386 ID1P41134 155 aa7.28□□□□□ -1.24
PSEN1-213ENST00000555386 HIST1H1AQ02539 215 aaPredicted RBP7.28□□□□□ -1.24
PSEN1-213ENST00000555386 PET117Q6UWS5 81 aa7.28□□□□□ -1.24
PSEN1-213ENST00000555386 FER1L6-AS1Q8NA97 138 aa7.28□□□□□ -1.24
PSEN1-213ENST00000555386 LENEPQ9Y5L5 61 aa7.28□□□□□ -1.24
PSEN1-213ENST00000555386 TRAV2A0A0B4J234 112 aa7.27□□□□□ -1.25
PSEN1-213ENST00000555386 SYS1-DBNDD2H3BUS1 97 aa7.27□□□□□ -1.25
PSEN1-213ENST00000555386 CMC4P56277 68 aaPredicted RBP7.27□□□□□ -1.25
PSEN1-213ENST00000555386 NUTF2P61970 127 aaKnown RBP7.27□□□□□ -1.25
PSEN1-213ENST00000555386 C9orf47Q6ZRZ4 202 aa7.27□□□□□ -1.25
PSEN1-213ENST00000555386 ORMDL3Q8N138 153 aa7.27□□□□□ -1.25
PSEN1-213ENST00000555386 C20orf173Q96LM9 149 aa7.27□□□□□ -1.25
PSEN1-213ENST00000555386 B9D2Q9BPU9 175 aa7.27□□□□□ -1.25
PSEN1-213ENST00000555386 TPPP3Q9BW30 176 aa7.27□□□□□ -1.25
PSEN1-213ENST00000555386 AP5S1Q9NUS5 200 aa7.27□□□□□ -1.25
PSEN1-213ENST00000555386 TRAV8-2A0A0B4J237 113 aa7.26□□□□□ -1.25
PSEN1-213ENST00000555386 F6UB75 175 aa7.26□□□□□ -1.25
PSEN1-213ENST00000555386 PPBPP02775 128 aa7.26□□□□□ -1.25
PSEN1-213ENST00000555386 ZNF80P51504 273 aaPredicted RBP7.26□□□□□ -1.25
PSEN1-213ENST00000555386 ZNF138P52744 262 aa7.26□□□□□ -1.25
PSEN1-213ENST00000555386 C21orf62-AS1Q17RA5 79 aa7.26□□□□□ -1.25
PSEN1-213ENST00000555386 TMEM78Q5T7P6 136 aa7.26□□□□□ -1.25
PSEN1-213ENST00000555386 FA2HQ7L5A8 372 aa7.26□□□□□ -1.25
PSEN1-213ENST00000555386 SPATA12Q7Z6I5 190 aa7.26□□□□□ -1.25
PSEN1-213ENST00000555386 STHQ8IWL8 128 aa7.26□□□□□ -1.25
PSEN1-213ENST00000555386 ZNF738Q8NE65 137 aa7.26□□□□□ -1.25
PSEN1-213ENST00000555386 OR10AG1Q8NH19 301 aa7.26□□□□□ -1.25
PSEN1-213ENST00000555386 Q8TAT8 98 aa7.26□□□□□ -1.25
PSEN1-213ENST00000555386 MAP1LC3CQ9BXW4 147 aa7.26□□□□□ -1.25
PSEN1-213ENST00000555386 TMEM191AQ9H0A3 160 aa7.26□□□□□ -1.25
PSEN1-213ENST00000555386 RETNQ9HD89 108 aa7.26□□□□□ -1.25
PSEN1-213ENST00000555386 LAMTOR2Q9Y2Q5 125 aa7.26□□□□□ -1.25
PSEN1-213ENST00000555386 TMSB15BA0A087X1C1 80 aa7.25□□□□□ -1.25
PSEN1-213ENST00000555386 SOCS3O14543 225 aa7.25□□□□□ -1.25
PSEN1-213ENST00000555386 ORM1P02763 201 aa7.25□□□□□ -1.25
PSEN1-213ENST00000555386 PRSS3P2Q8NHM4 247 aa7.25□□□□□ -1.25
PSEN1-213ENST00000555386 PRELID3AQ96N28 172 aa7.25□□□□□ -1.25
PSEN1-213ENST00000555386 AGPAT4-IT1Q9H0P7 198 aa7.25□□□□□ -1.25
PSEN1-213ENST00000555386 ST20Q9HBF5 79 aa7.25□□□□□ -1.25
PSEN1-213ENST00000555386 TENM3Q9P273 2699 aa7.25□□□□□ -1.25
PSEN1-213ENST00000555386 PRAC2D3DTV9 90 aa7.24□□□□□ -1.25
PSEN1-213ENST00000555386 D6R8Y8 96 aa7.24□□□□□ -1.25
PSEN1-213ENST00000555386 FXYD7P58549 80 aa7.24□□□□□ -1.25
PSEN1-213ENST00000555386 ERCC8Q13216 396 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms