RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 V9GYV3 84 aa14.62□□□□□ -0.07
FOXN3-209ENST00000555353 A0A087WWC5 75 aa14.61□□□□□ -0.07
FOXN3-209ENST00000555353 S100A4P26447 101 aaKnown RBP14.61□□□□□ -0.07
FOXN3-209ENST00000555353 KMT2CQ8NEZ4 4911 aaKnown RBP14.61□□□□□ -0.07
FOXN3-209ENST00000555353 DEFB131BA0A096LNP1 70 aa14.6□□□□□ -0.07
FOXN3-209ENST00000555353 SNURFLB1AK76 121 aa14.6□□□□□ -0.07
FOXN3-209ENST00000555353 TYMSP04818 313 aa14.6□□□□□ -0.07
FOXN3-209ENST00000555353 TSKUQ8WUA8 353 aa14.6□□□□□ -0.07
FOXN3-209ENST00000555353 NOP10Q9NPE3 64 aaKnown RBP14.6□□□□□ -0.07
FOXN3-209ENST00000555353 TMEM242Q9NWH2 141 aa14.6□□□□□ -0.07
FOXN3-209ENST00000555353 GRIFINA4D1Z8 144 aa14.59□□□□□ -0.07
FOXN3-209ENST00000555353 FAM231BA6NCW3 169 aa14.59□□□□□ -0.07
FOXN3-209ENST00000555353 GNRH2O43555 120 aa14.59□□□□□ -0.07
FOXN3-209ENST00000555353 DEFB130BP0DP73 79 aa14.59□□□□□ -0.07
FOXN3-209ENST00000555353 DEFB130AP0DP74 79 aa14.59□□□□□ -0.07
FOXN3-209ENST00000555353 DNLZQ5SXM8 178 aa14.59□□□□□ -0.07
FOXN3-209ENST00000555353 GFRA4Q9GZZ7 299 aa14.59□□□□□ -0.07
FOXN3-209ENST00000555353 A0A1W2PPQ1 181 aa14.58□□□□□ -0.08
FOXN3-209ENST00000555353 IGLL5B9A064 214 aa14.58□□□□□ -0.08
FOXN3-209ENST00000555353 ZNF415Q09FC8 603 aa14.58□□□□□ -0.08
FOXN3-209ENST00000555353 TP53TG3Q9ULZ0 132 aa14.58□□□□□ -0.08
FOXN3-209ENST00000555353 LCE6AA0A183 80 aa14.57□□□□□ -0.08
FOXN3-209ENST00000555353 HTN3P15516 51 aa14.57□□□□□ -0.08
FOXN3-209ENST00000555353 FER1L6-AS1Q8NA97 138 aa14.57□□□□□ -0.08
FOXN3-209ENST00000555353 IL36BQ9NZH7 164 aa14.57□□□□□ -0.08
FOXN3-209ENST00000555353 IGHV3-16A0A0C4DH30 117 aa14.56□□□□□ -0.08
FOXN3-209ENST00000555353 MED14OSP0DP75 135 aa14.56□□□□□ -0.08
FOXN3-209ENST00000555353 GZMBP10144 247 aa14.56□□□□□ -0.08
FOXN3-209ENST00000555353 TCTAP57738 103 aa14.56□□□□□ -0.08
FOXN3-209ENST00000555353 KCNIP4Q6PIL6 250 aa14.56□□□□□ -0.08
FOXN3-209ENST00000555353 IMMP2LQ96T52 175 aa14.56□□□□□ -0.08
FOXN3-209ENST00000555353 GSN-AS1Q9NRJ2 163 aa14.56□□□□□ -0.08
FOXN3-209ENST00000555353 NAT8BQ9UHF3 227 aa14.56□□□□□ -0.08
FOXN3-209ENST00000555353 SMIM27A0A1W2PRY6 76 aa14.55□□□□□ -0.08
FOXN3-209ENST00000555353 F2Z2F3 143 aa14.55□□□□□ -0.08
FOXN3-209ENST00000555353 H3BVH4 76 aa14.55□□□□□ -0.08
FOXN3-209ENST00000555353 ARMS2P0C7Q2 107 aa14.55□□□□□ -0.08
FOXN3-209ENST00000555353 S100PP25815 95 aa14.55□□□□□ -0.08
FOXN3-209ENST00000555353 C11orf72Q8NBR9 251 aa14.55□□□□□ -0.08
FOXN3-209ENST00000555353 BORCS7Q96B45 105 aa14.55□□□□□ -0.08
FOXN3-209ENST00000555353 TPPP3Q9BW30 176 aa14.55□□□□□ -0.08
FOXN3-209ENST00000555353 MDFICQ9P1T7 246 aa14.55□□□□□ -0.08
FOXN3-209ENST00000555353 HIGD1CA8MV81 97 aa14.54□□□□□ -0.08
FOXN3-209ENST00000555353 DAZ2Q13117 558 aaKnown RBP14.54□□□□□ -0.08
FOXN3-209ENST00000555353 SPXQ9BT56 116 aa14.54□□□□□ -0.08
FOXN3-209ENST00000555353 IGHV4-4A0A075B6R2 117 aa14.53□□□□□ -0.08
FOXN3-209ENST00000555353 OR5AL1P0C617 328 aa14.53□□□□□ -0.08
FOXN3-209ENST00000555353 IGLC6P0CF74 106 aa14.53□□□□□ -0.08
FOXN3-209ENST00000555353 RNASE3P12724 160 aaKnown RBP14.53□□□□□ -0.08
FOXN3-209ENST00000555353 FOXA3P55318 350 aaPredicted RBP14.53□□□□□ -0.08
FOXN3-209ENST00000555353 TCL1AP56279 114 aa14.53□□□□□ -0.08
FOXN3-209ENST00000555353 ATRAIDQ6UW56 229 aa14.53□□□□□ -0.08
FOXN3-209ENST00000555353 GTSF1Q8WW33 167 aa14.53□□□□□ -0.08
FOXN3-209ENST00000555353 SNAI2O43623 268 aa14.52□□□□□ -0.08
FOXN3-209ENST00000555353 ZNF575Q86XF7 245 aa14.52□□□□□ -0.08
FOXN3-209ENST00000555353 C9orf85Q96MD7 179 aa14.52□□□□□ -0.08
FOXN3-209ENST00000555353 SSBP4Q9BWG4 385 aaPredicted RBP14.52□□□□□ -0.08
FOXN3-209ENST00000555353 PHLDA3Q9Y5J5 127 aa14.52□□□□□ -0.08
FOXN3-209ENST00000555353 PLECQ15149 4684 aaKnown RBP14.52□□□□□ -0.09
FOXN3-209ENST00000555353 DYNC2H1Q8NCM8 4307 aaKnown RBP14.52□□□□□ -0.09
FOXN3-209ENST00000555353 ATP5G1P05496 136 aa14.51□□□□□ -0.09
FOXN3-209ENST00000555353 PGLYRP4Q96LB8 373 aa14.51□□□□□ -0.09
FOXN3-209ENST00000555353 GAGE12BA1L429 117 aa14.51□□□□□ -0.09
FOXN3-209ENST00000555353 GAGE7O76087 117 aa14.51□□□□□ -0.09
FOXN3-209ENST00000555353 GAGE12FP0CL80 117 aa14.51□□□□□ -0.09
FOXN3-209ENST00000555353 GAGE12GP0CL81 117 aa14.51□□□□□ -0.09
FOXN3-209ENST00000555353 GAGE12IP0CL82 117 aa14.51□□□□□ -0.09
FOXN3-209ENST00000555353 CTRLP40313 264 aa14.51□□□□□ -0.09
FOXN3-209ENST00000555353 LYZL1Q6UWQ5 148 aa14.51□□□□□ -0.09
FOXN3-209ENST00000555353 SYT8Q8NBV8 401 aa14.51□□□□□ -0.09
FOXN3-209ENST00000555353 NDUFAF3Q9BU61 184 aa14.51□□□□□ -0.09
FOXN3-209ENST00000555353 SMCO4Q9NRQ5 59 aa14.51□□□□□ -0.09
FOXN3-209ENST00000555353 CACNG7P62955 275 aa14.5□□□□□ -0.09
FOXN3-209ENST00000555353 SPANXN1Q5VSR9 72 aa14.5□□□□□ -0.09
FOXN3-209ENST00000555353 Q6ZTI0 123 aa14.5□□□□□ -0.09
FOXN3-209ENST00000555353 LINC00612Q8N6U2 182 aa14.5□□□□□ -0.09
FOXN3-209ENST00000555353 NUP35Q8NFH5 326 aa14.5□□□□□ -0.09
FOXN3-209ENST00000555353 LINC00476Q8WZB0 136 aa14.5□□□□□ -0.09
FOXN3-209ENST00000555353 FAM210BQ96KR6 192 aa14.5□□□□□ -0.09
FOXN3-209ENST00000555353 SCRT2Q9NQ03 307 aa14.5□□□□□ -0.09
FOXN3-209ENST00000555353 APLNQ9ULZ1 77 aa14.5□□□□□ -0.09
FOXN3-209ENST00000555353 TRGV1A0A0A0MS02 117 aa14.49□□□□□ -0.09
FOXN3-209ENST00000555353 M0R2P5 195 aa14.49□□□□□ -0.09
FOXN3-209ENST00000555353 LY6G6CO95867 125 aa14.49□□□□□ -0.09
FOXN3-209ENST00000555353 WDR73Q6P4I2 378 aa14.49□□□□□ -0.09
FOXN3-209ENST00000555353 ZFP82Q8N141 532 aa14.49□□□□□ -0.09
FOXN3-209ENST00000555353 TRAV9-1A0A075B6T8 112 aa14.48□□□□□ -0.09
FOXN3-209ENST00000555353 F5H768 121 aa14.48□□□□□ -0.09
FOXN3-209ENST00000555353 FAM3BP58499 235 aaPredicted RBP14.48□□□□□ -0.09
FOXN3-209ENST00000555353 URGCP-MRPS24S4R325 110 aa14.48□□□□□ -0.09
FOXN3-209ENST00000555353 TRGV2A0A075B6R0 118 aa14.47□□□□□ -0.09
FOXN3-209ENST00000555353 A0A1B0GUT8 65 aa14.47□□□□□ -0.09
FOXN3-209ENST00000555353 RIGQ13278 110 aa14.47□□□□□ -0.09
FOXN3-209ENST00000555353 BTF3L4Q96K17 158 aa14.47□□□□□ -0.09
FOXN3-209ENST00000555353 SPINK4O60575 86 aa14.47□□□□□ -0.09
FOXN3-209ENST00000555353 LGALS9BQ3B8N2 356 aa14.47□□□□□ -0.09
FOXN3-209ENST00000555353 OR10AG1Q8NH19 301 aa14.47□□□□□ -0.09
FOXN3-209ENST00000555353 PTH2Q96A98 100 aa14.47□□□□□ -0.09
FOXN3-209ENST00000555353 LYSTQ99698 3801 aa14.47□□□□□ -0.09
FOXN3-209ENST00000555353 CNFNQ9BYD5 112 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms