RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 C16orf90A8MZG2 172 aa8.07□□□□□ -1.12
VRK1-204ENST00000555351 DNAH10OSP0CZ25 163 aa8.07□□□□□ -1.12
VRK1-204ENST00000555351 MGST1P10620 155 aaKnown RBP8.07□□□□□ -1.12
VRK1-204ENST00000555351 EIF5AP63241 154 aaKnown RBP8.07□□□□□ -1.12
VRK1-204ENST00000555351 RHOHQ15669 191 aa8.07□□□□□ -1.12
VRK1-204ENST00000555351 DPPA3Q6W0C5 159 aa8.07□□□□□ -1.12
VRK1-204ENST00000555351 ZFP2Q6ZN57 461 aa8.07□□□□□ -1.12
VRK1-204ENST00000555351 LINC00479Q96M42 142 aa8.07□□□□□ -1.12
VRK1-204ENST00000555351 PRADC1Q9BSG0 188 aa8.07□□□□□ -1.12
VRK1-204ENST00000555351 IL36BQ9NZH7 164 aa8.07□□□□□ -1.12
VRK1-204ENST00000555351 TRAV34A0A0B4J273 112 aa8.06□□□□□ -1.12
VRK1-204ENST00000555351 IGKV3D-20A0A0C4DH25 116 aa8.06□□□□□ -1.12
VRK1-204ENST00000555351 A8MWV9 139 aa8.06□□□□□ -1.12
VRK1-204ENST00000555351 EVI2AP22794 236 aa8.06□□□□□ -1.12
VRK1-204ENST00000555351 FGF8P55075 233 aaPredicted RBP8.06□□□□□ -1.12
VRK1-204ENST00000555351 UBE2G2P60604 165 aa8.06□□□□□ -1.12
VRK1-204ENST00000555351 ZNF506Q5JVG8 444 aa8.06□□□□□ -1.12
VRK1-204ENST00000555351 C10orf126Q8N4M7 172 aa8.06□□□□□ -1.12
VRK1-204ENST00000555351 SLC25A29Q8N8R3 303 aa8.06□□□□□ -1.12
VRK1-204ENST00000555351 MBD3L1Q8WWY6 194 aa8.06□□□□□ -1.12
VRK1-204ENST00000555351 DYNC1H1Q14204 4646 aaKnown RBP8.05□□□□□ -1.12
VRK1-204ENST00000555351 PGPEP1LA6NFU8 196 aa8.05□□□□□ -1.12
VRK1-204ENST00000555351 S100A9P06702 114 aaKnown RBP8.05□□□□□ -1.12
VRK1-204ENST00000555351 S100A4P26447 101 aaKnown RBP8.05□□□□□ -1.12
VRK1-204ENST00000555351 ASIPP42127 132 aa8.05□□□□□ -1.12
VRK1-204ENST00000555351 LGALSLQ3ZCW2 172 aaPredicted RBP8.05□□□□□ -1.12
VRK1-204ENST00000555351 KANTRA0A1W2PQU2 76 aa8.04□□□□□ -1.12
VRK1-204ENST00000555351 B4DEV8 164 aa8.04□□□□□ -1.12
VRK1-204ENST00000555351 KRBOX1C9JBD0 128 aa8.04□□□□□ -1.12
VRK1-204ENST00000555351 EREGO14944 169 aa8.04□□□□□ -1.12
VRK1-204ENST00000555351 BCL2L11O43521 198 aa8.04□□□□□ -1.12
VRK1-204ENST00000555351 LTAP01374 205 aa8.04□□□□□ -1.12
VRK1-204ENST00000555351 UBE2G1P62253 170 aa8.04□□□□□ -1.12
VRK1-204ENST00000555351 ZNF674Q2M3X9 581 aa8.04□□□□□ -1.12
VRK1-204ENST00000555351 FAM162BQ5T6X4 162 aa8.04□□□□□ -1.12
VRK1-204ENST00000555351 SPATA12Q7Z6I5 190 aa8.04□□□□□ -1.12
VRK1-204ENST00000555351 WFDC10BQ8IUB3 73 aa8.04□□□□□ -1.12
VRK1-204ENST00000555351 NHLRC2Q8NBF2 726 aa8.04□□□□□ -1.12
VRK1-204ENST00000555351 OR11H4Q8NGC9 324 aa8.04□□□□□ -1.12
VRK1-204ENST00000555351 PGPEP1Q9NXJ5 209 aa8.04□□□□□ -1.12
VRK1-204ENST00000555351 IGHV3-38A0A0C4DH36 116 aa8.03□□□□□ -1.12
VRK1-204ENST00000555351 SMLR1H3BR10 107 aa8.03□□□□□ -1.12
VRK1-204ENST00000555351 CRIP1P50238 77 aa8.03□□□□□ -1.12
VRK1-204ENST00000555351 ERVFC1-1P60608 527 aa8.03□□□□□ -1.12
VRK1-204ENST00000555351 LINC01556Q5JQF7 62 aa8.03□□□□□ -1.12
VRK1-204ENST00000555351 CST9LP1Q5W188 147 aa8.03□□□□□ -1.12
VRK1-204ENST00000555351 CDPF1Q6NVV7 123 aa8.03□□□□□ -1.12
VRK1-204ENST00000555351 SYT8Q8NBV8 401 aa8.03□□□□□ -1.12
VRK1-204ENST00000555351 ZC2HC1AQ96GY0 325 aa8.03□□□□□ -1.12
VRK1-204ENST00000555351 ZNF471Q9BX82 626 aaPredicted RBP8.03□□□□□ -1.12
VRK1-204ENST00000555351 PARLQ9H300 379 aa8.03□□□□□ -1.12
VRK1-204ENST00000555351 MSRB1Q9NZV6 116 aa8.03□□□□□ -1.12
VRK1-204ENST00000555351 TRAV8-6A0A0B4J262 113 aa8.02□□□□□ -1.13
VRK1-204ENST00000555351 LOC100131303A0A0U1RQF7 123 aa8.02□□□□□ -1.13
VRK1-204ENST00000555351 RHODO00212 210 aa8.02□□□□□ -1.13
VRK1-204ENST00000555351 PAGE4O60829 102 aa8.02□□□□□ -1.13
VRK1-204ENST00000555351 SH2D1AO60880 128 aa8.02□□□□□ -1.13
VRK1-204ENST00000555351 FAM213BQ8TBF2 198 aa8.02□□□□□ -1.13
VRK1-204ENST00000555351 SFT2D1Q8WV19 159 aa8.02□□□□□ -1.13
VRK1-204ENST00000555351 SCRT2Q9NQ03 307 aa8.02□□□□□ -1.13
VRK1-204ENST00000555351 PFDN1O60925 122 aa8.01□□□□□ -1.13
VRK1-204ENST00000555351 CRYGDP07320 174 aa8.01□□□□□ -1.13
VRK1-204ENST00000555351 CXCL1P09341 107 aa8.01□□□□□ -1.13
VRK1-204ENST00000555351 H2AFB1P0C5Y9 115 aa8.01□□□□□ -1.13
VRK1-204ENST00000555351 TPT1P13693 172 aaKnown RBP8.01□□□□□ -1.13
VRK1-204ENST00000555351 AKR1C3P42330 323 aa8.01□□□□□ -1.13
VRK1-204ENST00000555351 RAB5CP51148 216 aa8.01□□□□□ -1.13
VRK1-204ENST00000555351 LELP1Q5T871 98 aa8.01□□□□□ -1.13
VRK1-204ENST00000555351 UFSP1Q6NVU6 142 aa8.01□□□□□ -1.13
VRK1-204ENST00000555351 ATP6V0E2Q8NHE4 81 aa8.01□□□□□ -1.13
VRK1-204ENST00000555351 KRTAP17-1Q9BYP8 105 aa8.01□□□□□ -1.13
VRK1-204ENST00000555351 GTSF1LQ9H1H1 148 aa8.01□□□□□ -1.13
VRK1-204ENST00000555351 TRAV1-1A0A0B4J248 108 aa8□□□□□ -1.13
VRK1-204ENST00000555351 IBA57-AS1B1ANH7 110 aa8□□□□□ -1.13
VRK1-204ENST00000555351 ARMS2P0C7Q2 107 aa8□□□□□ -1.13
VRK1-204ENST00000555351 LINC00694P0DN24 101 aa8□□□□□ -1.13
VRK1-204ENST00000555351 KRTAP10-2P60368 255 aa8□□□□□ -1.13
VRK1-204ENST00000555351 EIF5AL1Q6IS14 154 aaKnown RBP8□□□□□ -1.13
VRK1-204ENST00000555351 TMUB2Q71RG4 321 aa8□□□□□ -1.13
VRK1-204ENST00000555351 MLST8Q9BVC4 326 aa8□□□□□ -1.13
VRK1-204ENST00000555351 A0A087WWC5 75 aa7.99□□□□□ -1.13
VRK1-204ENST00000555351 IGHV3-73A0A0B4J1V6 119 aa7.99□□□□□ -1.13
VRK1-204ENST00000555351 H3BVH4 76 aa7.99□□□□□ -1.13
VRK1-204ENST00000555351 LAGE3Q14657 143 aa7.99□□□□□ -1.13
VRK1-204ENST00000555351 OR10J3Q5JRS4 329 aa7.99□□□□□ -1.13
VRK1-204ENST00000555351 SFRP2Q96HF1 295 aa7.99□□□□□ -1.13
VRK1-204ENST00000555351 MANBALQ9NQG1 85 aa7.99□□□□□ -1.13
VRK1-204ENST00000555351 PHLDA3Q9Y5J5 127 aa7.99□□□□□ -1.13
VRK1-204ENST00000555351 A0A087WTM6 91 aa7.98□□□□□ -1.13
VRK1-204ENST00000555351 TEX46H3BTG2 121 aa7.98□□□□□ -1.13
VRK1-204ENST00000555351 M0R036 132 aa7.98□□□□□ -1.13
VRK1-204ENST00000555351 Q6ZSN1 163 aa7.98□□□□□ -1.13
VRK1-204ENST00000555351 TCTE3Q8IZS6 198 aa7.98□□□□□ -1.13
VRK1-204ENST00000555351 ZFP82Q8N141 532 aa7.98□□□□□ -1.13
VRK1-204ENST00000555351 TNFRSF18Q9Y5U5 241 aa7.98□□□□□ -1.13
VRK1-204ENST00000555351 TRBV10-1A0A0K0K1A3 114 aa7.97□□□□□ -1.13
VRK1-204ENST00000555351 BAGE2Q86Y30 109 aa7.97□□□□□ -1.13
VRK1-204ENST00000555351 C11orf52Q96A22 123 aa7.97□□□□□ -1.13
VRK1-204ENST00000555351 SCO2A0A1W2PP80 73 aa7.96□□□□□ -1.14
VRK1-204ENST00000555351 GRIFINA4D1Z8 144 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms