RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 SSBP4Q9BWG4 385 aaPredicted RBP7.85□□□□□ -1.15
SHMT2-218ENST00000555213 NAT8BQ9UHF3 227 aa7.85□□□□□ -1.15
SHMT2-218ENST00000555213 A0A1B0GXF2 115 aa7.84□□□□□ -1.15
SHMT2-218ENST00000555213 SPINK4O60575 86 aa7.84□□□□□ -1.15
SHMT2-218ENST00000555213 SPART-AS1P0CW21 52 aa7.84□□□□□ -1.15
SHMT2-218ENST00000555213 S100PP25815 95 aa7.84□□□□□ -1.15
SHMT2-218ENST00000555213 DNLZQ5SXM8 178 aa7.84□□□□□ -1.15
SHMT2-218ENST00000555213 FAM159AQ6UWV7 190 aa7.84□□□□□ -1.15
SHMT2-218ENST00000555213 C11orf45Q8TAV5 145 aa7.84□□□□□ -1.15
SHMT2-218ENST00000555213 MUC7Q8TAX7 377 aa7.84□□□□□ -1.15
SHMT2-218ENST00000555213 BTF3L4Q96K17 158 aa7.84□□□□□ -1.15
SHMT2-218ENST00000555213 PGLYRP4Q96LB8 373 aa7.84□□□□□ -1.15
SHMT2-218ENST00000555213 NAGKQ9UJ70 344 aa7.84□□□□□ -1.15
SHMT2-218ENST00000555213 TRGV11A0A075B6L2 103 aa7.83□□□□□ -1.16
SHMT2-218ENST00000555213 IGHV1OR15-1A0A075B7D0 117 aa7.83□□□□□ -1.16
SHMT2-218ENST00000555213 SNURFLB1AK76 121 aa7.83□□□□□ -1.16
SHMT2-218ENST00000555213 RPS20P60866 119 aaKnown RBP7.83□□□□□ -1.16
SHMT2-218ENST00000555213 TDRG1Q3Y452 100 aa7.83□□□□□ -1.16
SHMT2-218ENST00000555213 MUC21Q5SSG8 566 aa7.83□□□□□ -1.16
SHMT2-218ENST00000555213 LYZL1Q6UWQ5 148 aa7.83□□□□□ -1.16
SHMT2-218ENST00000555213 RNASE8Q8TDE3 154 aaKnown RBP7.83□□□□□ -1.16
SHMT2-218ENST00000555213 TP53TG3Q9ULZ0 132 aa7.83□□□□□ -1.16
SHMT2-218ENST00000555213 LYRM9A8MSI8 78 aa7.82□□□□□ -1.16
SHMT2-218ENST00000555213 PRM2P04554 102 aa7.82□□□□□ -1.16
SHMT2-218ENST00000555213 ARMS2P0C7Q2 107 aa7.82□□□□□ -1.16
SHMT2-218ENST00000555213 RNASE3P12724 160 aaKnown RBP7.82□□□□□ -1.16
SHMT2-218ENST00000555213 RPS10P46783 165 aaKnown RBP7.82□□□□□ -1.16
SHMT2-218ENST00000555213 FAM222AQ5U5X8 452 aa7.82□□□□□ -1.16
SHMT2-218ENST00000555213 TMEM136Q6ZRR5 245 aa7.82□□□□□ -1.16
SHMT2-218ENST00000555213 KCNS1Q96KK3 526 aa7.82□□□□□ -1.16
SHMT2-218ENST00000555213 SCRT2Q9NQ03 307 aa7.82□□□□□ -1.16
SHMT2-218ENST00000555213 TIMM8BQ9Y5J9 83 aaPredicted RBP7.82□□□□□ -1.16
SHMT2-218ENST00000555213 RYR3Q15413 4870 aa7.81□□□□□ -1.16
SHMT2-218ENST00000555213 COL7A1Q02388 2944 aa7.81□□□□□ -1.16
SHMT2-218ENST00000555213 C3orf84H3BNL1 204 aa7.81□□□□□ -1.16
SHMT2-218ENST00000555213 SNAI2O43623 268 aa7.81□□□□□ -1.16
SHMT2-218ENST00000555213 TRGC2P03986 189 aa7.81□□□□□ -1.16
SHMT2-218ENST00000555213 AZU1P20160 251 aa7.81□□□□□ -1.16
SHMT2-218ENST00000555213 CTRLP40313 264 aa7.81□□□□□ -1.16
SHMT2-218ENST00000555213 ZNF415Q09FC8 603 aa7.81□□□□□ -1.16
SHMT2-218ENST00000555213 MRPL54Q6P161 138 aaKnown RBP7.81□□□□□ -1.16
SHMT2-218ENST00000555213 GATD1Q8NB37 220 aa7.81□□□□□ -1.16
SHMT2-218ENST00000555213 CNFNQ9BYD5 112 aa7.81□□□□□ -1.16
SHMT2-218ENST00000555213 MSRB1Q9NZV6 116 aa7.81□□□□□ -1.16
SHMT2-218ENST00000555213 DKK2Q9UBU2 259 aa7.81□□□□□ -1.16
SHMT2-218ENST00000555213 DNAH9Q9NYC9 4486 aa7.8□□□□□ -1.16
SHMT2-218ENST00000555213 IGHV4-4A0A075B6R2 117 aa7.8□□□□□ -1.16
SHMT2-218ENST00000555213 IGHV3-16A0A0C4DH30 117 aa7.8□□□□□ -1.16
SHMT2-218ENST00000555213 MUC21A0A0G2JKD1 596 aa7.8□□□□□ -1.16
SHMT2-218ENST00000555213 MUC21A0A140T8X8 626 aa7.8□□□□□ -1.16
SHMT2-218ENST00000555213 NUPR2A6NF83 97 aa7.8□□□□□ -1.16
SHMT2-218ENST00000555213 NANOS2P60321 138 aaKnown RBP7.8□□□□□ -1.16
SHMT2-218ENST00000555213 DAD1P61803 113 aa7.8□□□□□ -1.16
SHMT2-218ENST00000555213 WDR73Q6P4I2 378 aa7.8□□□□□ -1.16
SHMT2-218ENST00000555213 FER1L6-AS1Q8NA97 138 aa7.8□□□□□ -1.16
SHMT2-218ENST00000555213 FRZBQ92765 325 aa7.8□□□□□ -1.16
SHMT2-218ENST00000555213 GNB1LQ9BYB4 327 aa7.8□□□□□ -1.16
SHMT2-218ENST00000555213 MDFICQ9P1T7 246 aa7.8□□□□□ -1.16
SHMT2-218ENST00000555213 CELA1Q9UNI1 258 aa7.8□□□□□ -1.16
SHMT2-218ENST00000555213 MUC4Q99102 2169 aa7.8□□□□□ -1.16
SHMT2-218ENST00000555213 A0A1B0GUT8 65 aa7.79□□□□□ -1.16
SHMT2-218ENST00000555213 XKRY2A2RUG3 117 aa7.79□□□□□ -1.16
SHMT2-218ENST00000555213 OR5AL1P0C617 328 aa7.79□□□□□ -1.16
SHMT2-218ENST00000555213 NTF3P20783 257 aa7.79□□□□□ -1.16
SHMT2-218ENST00000555213 RASL11AQ6T310 242 aa7.79□□□□□ -1.16
SHMT2-218ENST00000555213 ATP5L2Q7Z4Y8 100 aa7.79□□□□□ -1.16
SHMT2-218ENST00000555213 NOP10Q9NPE3 64 aaKnown RBP7.79□□□□□ -1.16
SHMT2-218ENST00000555213 GSN-AS1Q9NRJ2 163 aa7.79□□□□□ -1.16
SHMT2-218ENST00000555213 PLAC8L1A1L4L8 177 aa7.78□□□□□ -1.16
SHMT2-218ENST00000555213 F2Z2F3 143 aa7.78□□□□□ -1.16
SHMT2-218ENST00000555213 DEFB130BP0DP73 79 aa7.78□□□□□ -1.16
SHMT2-218ENST00000555213 DEFB130AP0DP74 79 aa7.78□□□□□ -1.16
SHMT2-218ENST00000555213 FABP9Q0Z7S8 132 aa7.78□□□□□ -1.16
SHMT2-218ENST00000555213 DAZ2Q13117 558 aaKnown RBP7.78□□□□□ -1.16
SHMT2-218ENST00000555213 ZFAND6Q6FIF0 208 aa7.78□□□□□ -1.16
SHMT2-218ENST00000555213 C11orf72Q8NBR9 251 aa7.78□□□□□ -1.16
SHMT2-218ENST00000555213 OR10AG1Q8NH19 301 aa7.78□□□□□ -1.16
SHMT2-218ENST00000555213 C9orf85Q96MD7 179 aa7.78□□□□□ -1.16
SHMT2-218ENST00000555213 KLK5Q9Y337 293 aaPredicted RBP7.78□□□□□ -1.16
SHMT2-218ENST00000555213 TRAV10A0A0B4J240 114 aa7.77□□□□□ -1.17
SHMT2-218ENST00000555213 H3BVH4 76 aa7.77□□□□□ -1.17
SHMT2-218ENST00000555213 MED14OSP0DP75 135 aa7.77□□□□□ -1.17
SHMT2-218ENST00000555213 S100A4P26447 101 aaKnown RBP7.77□□□□□ -1.17
SHMT2-218ENST00000555213 ASIPP42127 132 aa7.77□□□□□ -1.17
SHMT2-218ENST00000555213 CAMPP49913 170 aa7.77□□□□□ -1.17
SHMT2-218ENST00000555213 SSTP61278 116 aa7.77□□□□□ -1.17
SHMT2-218ENST00000555213 SLAQ13239 276 aa7.77□□□□□ -1.17
SHMT2-218ENST00000555213 RIGQ13278 110 aa7.77□□□□□ -1.17
SHMT2-218ENST00000555213 C12orf74Q32Q52 190 aa7.77□□□□□ -1.17
SHMT2-218ENST00000555213 Q6ZTC4 211 aa7.77□□□□□ -1.17
SHMT2-218ENST00000555213 PHLDA1Q8WV24 401 aaPredicted RBP7.77□□□□□ -1.17
SHMT2-218ENST00000555213 SPXQ9BT56 116 aa7.77□□□□□ -1.17
SHMT2-218ENST00000555213 TRAPPC1Q9Y5R8 145 aa7.77□□□□□ -1.17
SHMT2-218ENST00000555213 HUWE1Q7Z6Z7 4374 aaKnown RBP7.77□□□□□ -1.17
SHMT2-218ENST00000555213 TRGV2A0A075B6R0 118 aa7.76□□□□□ -1.17
SHMT2-218ENST00000555213 TRGV1A0A0A0MS02 117 aa7.76□□□□□ -1.17
SHMT2-218ENST00000555213 NXPH4O95158 308 aa7.76□□□□□ -1.17
SHMT2-218ENST00000555213 TRGC1P0CF51 173 aa7.76□□□□□ -1.17
SHMT2-218ENST00000555213 HBBP68871 147 aa7.76□□□□□ -1.17
SHMT2-218ENST00000555213 LGALS9BQ3B8N2 356 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms