RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 CST9LQ9H4G1 147 aa8.47□□□□□ -1.05
SRP54-205ENST00000554803 VPREB3Q9UKI3 123 aa8.47□□□□□ -1.05
SRP54-205ENST00000554803 TRBV7-9A0A0J9YWB2 115 aa8.46□□□□□ -1.06
SRP54-205ENST00000554803 GAGE10A6NGK3 116 aa8.46□□□□□ -1.06
SRP54-205ENST00000554803 PPP1R17O96001 155 aa8.46□□□□□ -1.06
SRP54-205ENST00000554803 ZNF138P52744 262 aa8.46□□□□□ -1.06
SRP54-205ENST00000554803 COTL1Q14019 142 aa8.46□□□□□ -1.06
SRP54-205ENST00000554803 OCIAD2Q56VL3 154 aa8.46□□□□□ -1.06
SRP54-205ENST00000554803 SAMD13Q5VXD3 122 aa8.46□□□□□ -1.06
SRP54-205ENST00000554803 MRAP2Q96G30 205 aa8.46□□□□□ -1.06
SRP54-205ENST00000554803 MEGF9Q9H1U4 602 aa8.46□□□□□ -1.06
SRP54-205ENST00000554803 IGKV2-40A0A087WW87 121 aaPredicted RBP8.45□□□□□ -1.06
SRP54-205ENST00000554803 IGHV7-81A0A0B4J1V7 117 aa8.45□□□□□ -1.06
SRP54-205ENST00000554803 TMEM213A2RRL7 107 aa8.45□□□□□ -1.06
SRP54-205ENST00000554803 FAM223BA6NKX1 122 aa8.45□□□□□ -1.06
SRP54-205ENST00000554803 NCBP2LA6PVI3 153 aaKnown RBP8.45□□□□□ -1.06
SRP54-205ENST00000554803 LINC01619G3V211 115 aa8.45□□□□□ -1.06
SRP54-205ENST00000554803 BUB3O43684 328 aa8.45□□□□□ -1.06
SRP54-205ENST00000554803 IGKV2D-40P01614 121 aaPredicted RBP8.45□□□□□ -1.06
SRP54-205ENST00000554803 ORM1P02763 201 aa8.45□□□□□ -1.06
SRP54-205ENST00000554803 SMIM17P0DL12 118 aa8.45□□□□□ -1.06
SRP54-205ENST00000554803 MED14OSP0DP75 135 aa8.45□□□□□ -1.06
SRP54-205ENST00000554803 CRIP2P52943 208 aaPredicted RBP8.45□□□□□ -1.06
SRP54-205ENST00000554803 TMEM78Q5T7P6 136 aa8.45□□□□□ -1.06
SRP54-205ENST00000554803 AMMECR1LQ6DCA0 310 aa8.45□□□□□ -1.06
SRP54-205ENST00000554803 C9orf47Q6ZRZ4 202 aa8.45□□□□□ -1.06
SRP54-205ENST00000554803 FAM223AQ8IWN6 122 aa8.45□□□□□ -1.06
SRP54-205ENST00000554803 C11orf44Q8N8P7 122 aa8.45□□□□□ -1.06
SRP54-205ENST00000554803 RNASE8Q8TDE3 154 aaKnown RBP8.45□□□□□ -1.06
SRP54-205ENST00000554803 METTL26Q96S19 204 aa8.45□□□□□ -1.06
SRP54-205ENST00000554803 ZFAND3Q9H8U3 227 aa8.45□□□□□ -1.06
SRP54-205ENST00000554803 OR2T8A6NH00 312 aa8.44□□□□□ -1.06
SRP54-205ENST00000554803 H3BUX3 64 aa8.44□□□□□ -1.06
SRP54-205ENST00000554803 K7EP34 96 aa8.44□□□□□ -1.06
SRP54-205ENST00000554803 DPM2O94777 84 aa8.44□□□□□ -1.06
SRP54-205ENST00000554803 TNFRSF6BO95407 300 aa8.44□□□□□ -1.06
SRP54-205ENST00000554803 NPYP01303 97 aa8.44□□□□□ -1.06
SRP54-205ENST00000554803 PLNP26678 52 aa8.44□□□□□ -1.06
SRP54-205ENST00000554803 ANKRD39Q53RE8 183 aa8.44□□□□□ -1.06
SRP54-205ENST00000554803 ADAMTSL5Q6ZMM2 481 aa8.44□□□□□ -1.06
SRP54-205ENST00000554803 TMEM219Q86XT9 240 aa8.44□□□□□ -1.06
SRP54-205ENST00000554803 Q8N9W7 124 aa8.44□□□□□ -1.06
SRP54-205ENST00000554803 RNF185Q96GF1 192 aa8.44□□□□□ -1.06
SRP54-205ENST00000554803 HUWE1Q7Z6Z7 4374 aaKnown RBP8.44□□□□□ -1.06
SRP54-205ENST00000554803 TRAV12-1A0A0B4J245 112 aa8.43□□□□□ -1.06
SRP54-205ENST00000554803 GAGE12BA1L429 117 aa8.43□□□□□ -1.06
SRP54-205ENST00000554803 H0Y8G0 127 aa8.43□□□□□ -1.06
SRP54-205ENST00000554803 H3BUA1 57 aa8.43□□□□□ -1.06
SRP54-205ENST00000554803 SNAI2O43623 268 aa8.43□□□□□ -1.06
SRP54-205ENST00000554803 ZNF207O43670 478 aaKnown RBP8.43□□□□□ -1.06
SRP54-205ENST00000554803 IGKCP01834 107 aa8.43□□□□□ -1.06
SRP54-205ENST00000554803 LY6EQ16553 131 aa8.43□□□□□ -1.06
SRP54-205ENST00000554803 CASC10Q5T4H9 136 aa8.43□□□□□ -1.06
SRP54-205ENST00000554803 UFSP1Q6NVU6 142 aa8.43□□□□□ -1.06
SRP54-205ENST00000554803 MYOZ3Q8TDC0 251 aa8.43□□□□□ -1.06
SRP54-205ENST00000554803 SMAD5-AS1Q9Y6J3 95 aa8.43□□□□□ -1.06
SRP54-205ENST00000554803 U3KQE9 123 aa8.43□□□□□ -1.06
SRP54-205ENST00000554803 LCE6AA0A183 80 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 LOC389332A0A1B0GUA5 103 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 A6NDX4 124 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 CBY3A6NI87 242 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 NCR2O95944 276 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 IGHG4P01861 327 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 CLEC3BP05452 202 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 SMIM13P0DJ93 91 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 FABP2P12104 132 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 NDPQ00604 133 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 ODF1Q14990 250 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 C15orf32Q32M92 178 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 NSUN5P1Q3KNT7 163 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 ORMDL2Q53FV1 153 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 ERASQ7Z444 233 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 WFDC9Q8NEX5 89 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 OR2K2Q8NGT1 345 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 LINC00477Q96M19 166 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 VGLL1Q99990 258 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 C20orf78Q9BR46 151 aa8.42□□□□□ -1.06
SRP54-205ENST00000554803 STARD9Q9P2P6 4700 aa8.41□□□□□ -1.06
SRP54-205ENST00000554803 PCLOQ9Y6V0 5065 aa8.41□□□□□ -1.06
SRP54-205ENST00000554803 TMSB15BA0A087X1C1 80 aa8.41□□□□□ -1.06
SRP54-205ENST00000554803 A0A0G2JLM5 398 aa8.41□□□□□ -1.06
SRP54-205ENST00000554803 M0R381 172 aa8.41□□□□□ -1.06
SRP54-205ENST00000554803 OVOL1O14753 267 aa8.41□□□□□ -1.06
SRP54-205ENST00000554803 NHLRC4P0CG21 123 aaPredicted RBP8.41□□□□□ -1.06
SRP54-205ENST00000554803 LEPP41159 167 aa8.41□□□□□ -1.06
SRP54-205ENST00000554803 LAGE3Q14657 143 aa8.41□□□□□ -1.06
SRP54-205ENST00000554803 TM2D2Q9BX73 214 aa8.41□□□□□ -1.06
SRP54-205ENST00000554803 HERC2O95714 4834 aa8.41□□□□□ -1.06
SRP54-205ENST00000554803 RYR1P21817 5038 aa8.41□□□□□ -1.06
SRP54-205ENST00000554803 TRAV8-6A0A0B4J262 113 aa8.4□□□□□ -1.06
SRP54-205ENST00000554803 A0A1W2PPM0 123 aa8.4□□□□□ -1.06
SRP54-205ENST00000554803 PRSS1P07477 247 aa8.4□□□□□ -1.06
SRP54-205ENST00000554803 ZNF80P51504 273 aaPredicted RBP8.4□□□□□ -1.06
SRP54-205ENST00000554803 KRTAP10-11P60412 298 aa8.4□□□□□ -1.06
SRP54-205ENST00000554803 RPL32P62910 135 aaKnown RBP8.4□□□□□ -1.06
SRP54-205ENST00000554803 VPS25Q9BRG1 176 aa8.4□□□□□ -1.06
SRP54-205ENST00000554803 TIMM8BQ9Y5J9 83 aaPredicted RBP8.4□□□□□ -1.06
SRP54-205ENST00000554803 IGLV2-18A0A075B6J9 118 aa8.39□□□□□ -1.07
SRP54-205ENST00000554803 ATP5G2Q06055 141 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 192.7 ms