RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 NUPR1O60356 82 aa9.08□□□□□ -0.96
SHMT2-214ENST00000554604 PRB4P10163 310 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-214ENST00000554604 ZNF80P51504 273 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-214ENST00000554604 HIST1H1AQ02539 215 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-214ENST00000554604 JOSD1Q15040 202 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-214ENST00000554604 DCANP1Q8TF63 244 aa9.08□□□□□ -0.96
SHMT2-214ENST00000554604 BORCS7Q96B45 105 aa9.08□□□□□ -0.96
SHMT2-214ENST00000554604 RYR3Q15413 4870 aa9.08□□□□□ -0.96
SHMT2-214ENST00000554604 LYSTQ99698 3801 aa9.07□□□□□ -0.96
SHMT2-214ENST00000554604 SNRPD3P62318 126 aaKnown RBP9.07□□□□□ -0.96
SHMT2-214ENST00000554604 LINC01559Q495D7 138 aa9.07□□□□□ -0.96
SHMT2-214ENST00000554604 PSMG4Q5JS54 123 aa9.07□□□□□ -0.96
SHMT2-214ENST00000554604 ZNF738Q8NE65 137 aa9.07□□□□□ -0.96
SHMT2-214ENST00000554604 OR11H2Q8NH07 326 aa9.07□□□□□ -0.96
SHMT2-214ENST00000554604 C18orf32Q8TCD1 76 aa9.07□□□□□ -0.96
SHMT2-214ENST00000554604 LINC00477Q96M19 166 aa9.07□□□□□ -0.96
SHMT2-214ENST00000554604 ALKBH7Q9BT30 221 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-214ENST00000554604 DYNC2H1Q8NCM8 4307 aaKnown RBP9.07□□□□□ -0.96
SHMT2-214ENST00000554604 KNCNA6PVL3 124 aa9.06□□□□□ -0.96
SHMT2-214ENST00000554604 F2Z2F3 143 aa9.06□□□□□ -0.96
SHMT2-214ENST00000554604 ARMS2P0C7Q2 107 aa9.06□□□□□ -0.96
SHMT2-214ENST00000554604 CTRLP40313 264 aa9.06□□□□□ -0.96
SHMT2-214ENST00000554604 KCNS1Q96KK3 526 aa9.06□□□□□ -0.96
SHMT2-214ENST00000554604 C20orf173Q96LM9 149 aa9.06□□□□□ -0.96
SHMT2-214ENST00000554604 SSBP4Q9BWG4 385 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-214ENST00000554604 TRBV7-9A0A0J9YWB2 115 aa9.05□□□□□ -0.96
SHMT2-214ENST00000554604 NUPR2A6NF83 97 aa9.05□□□□□ -0.96
SHMT2-214ENST00000554604 IGLC6P0CF74 106 aa9.05□□□□□ -0.96
SHMT2-214ENST00000554604 DMRTA1Q5VZB9 504 aa9.05□□□□□ -0.96
SHMT2-214ENST00000554604 MORN3Q6PF18 240 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-214ENST00000554604 ZNF493Q6ZR52 646 aa9.05□□□□□ -0.96
SHMT2-214ENST00000554604 TRPT1Q86TN4 253 aaKnown RBP9.05□□□□□ -0.96
SHMT2-214ENST00000554604 FER1L6-AS1Q8NA97 138 aa9.05□□□□□ -0.96
SHMT2-214ENST00000554604 OR10J6PQ8NGY7 276 aa9.05□□□□□ -0.96
SHMT2-214ENST00000554604 PCP4L1A6NKN8 68 aa9.04□□□□□ -0.96
SHMT2-214ENST00000554604 ID1P41134 155 aa9.04□□□□□ -0.96
SHMT2-214ENST00000554604 LYZL1Q6UWQ5 148 aa9.04□□□□□ -0.96
SHMT2-214ENST00000554604 TMSB15BA0A087X1C1 80 aa9.03□□□□□ -0.96
SHMT2-214ENST00000554604 ORM1P02763 201 aa9.03□□□□□ -0.96
SHMT2-214ENST00000554604 GPX1P07203 203 aa9.03□□□□□ -0.96
SHMT2-214ENST00000554604 NUTF2P61970 127 aaKnown RBP9.03□□□□□ -0.96
SHMT2-214ENST00000554604 ZNF575Q86XF7 245 aa9.03□□□□□ -0.96
SHMT2-214ENST00000554604 FAM19A4Q96LR4 140 aa9.03□□□□□ -0.96
SHMT2-214ENST00000554604 CNFNQ9BYD5 112 aa9.03□□□□□ -0.96
SHMT2-214ENST00000554604 SAMD10Q9BYL1 202 aa9.03□□□□□ -0.96
SHMT2-214ENST00000554604 GSN-AS1Q9NRJ2 163 aa9.03□□□□□ -0.96
SHMT2-214ENST00000554604 KLK5Q9Y337 293 aaPredicted RBP9.03□□□□□ -0.96
SHMT2-214ENST00000554604 DEFB4AO15263 64 aa9.02□□□□□ -0.97
SHMT2-214ENST00000554604 ZNF324O75467 553 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-214ENST00000554604 IQCJQ1A5X6 159 aa9.02□□□□□ -0.97
SHMT2-214ENST00000554604 CDPF1Q6NVV7 123 aa9.02□□□□□ -0.97
SHMT2-214ENST00000554604 CEMP1Q6PRD7 247 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-214ENST00000554604 OR8A1Q8NGG7 326 aa9.02□□□□□ -0.97
SHMT2-214ENST00000554604 C11orf45Q8TAV5 145 aa9.02□□□□□ -0.97
SHMT2-214ENST00000554604 C11orf68Q9H3H3 251 aaKnown RBP9.02□□□□□ -0.97
SHMT2-214ENST00000554604 GIG44P09565 113 aaPredicted RBP9.01□□□□□ -0.97
SHMT2-214ENST00000554604 ZFAND2AQ8N6M9 145 aa9.01□□□□□ -0.97
SHMT2-214ENST00000554604 PHLDA1Q8WV24 401 aaPredicted RBP9.01□□□□□ -0.97
SHMT2-214ENST00000554604 TPPP3Q9BW30 176 aa9.01□□□□□ -0.97
SHMT2-214ENST00000554604 C1QTNF4Q9BXJ3 329 aa9.01□□□□□ -0.97
SHMT2-214ENST00000554604 IGKV3D-20A0A0C4DH25 116 aa9□□□□□ -0.97
SHMT2-214ENST00000554604 H3BMM0 161 aa9□□□□□ -0.97
SHMT2-214ENST00000554604 AMTP48728 403 aa9□□□□□ -0.97
SHMT2-214ENST00000554604 NANOS2P60321 138 aaKnown RBP9□□□□□ -0.97
SHMT2-214ENST00000554604 FAM104BQ5XKR9 115 aa9□□□□□ -0.97
SHMT2-214ENST00000554604 CHCHD1Q96BP2 118 aaKnown RBP9□□□□□ -0.97
SHMT2-214ENST00000554604 SACSQ9NZJ4 4579 aa8.99□□□□□ -0.97
SHMT2-214ENST00000554604 TRAV21A0A0B4J279 112 aa8.99□□□□□ -0.97
SHMT2-214ENST00000554604 HSBP1O75506 76 aa8.99□□□□□ -0.97
SHMT2-214ENST00000554604 LY6G6CO95867 125 aa8.99□□□□□ -0.97
SHMT2-214ENST00000554604 IGKV3-20P01619 116 aa8.99□□□□□ -0.97
SHMT2-214ENST00000554604 ZNF705DP0CH99 300 aaPredicted RBP8.99□□□□□ -0.97
SHMT2-214ENST00000554604 ZNF705BP0CI00 300 aaPredicted RBP8.99□□□□□ -0.97
SHMT2-214ENST00000554604 HLA-DRB4P13762 266 aa8.99□□□□□ -0.97
SHMT2-214ENST00000554604 MIFP14174 115 aa8.99□□□□□ -0.97
SHMT2-214ENST00000554604 NIT1Q86X76 327 aa8.99□□□□□ -0.97
SHMT2-214ENST00000554604 Q8NAQ8 132 aa8.99□□□□□ -0.97
SHMT2-214ENST00000554604 URB1-AS1Q96HZ7 61 aa8.99□□□□□ -0.97
SHMT2-214ENST00000554604 ODF3Q96PU9 254 aa8.99□□□□□ -0.97
SHMT2-214ENST00000554604 TMEM191AQ9H0A3 160 aa8.99□□□□□ -0.97
SHMT2-214ENST00000554604 C11orf21Q9P2W6 132 aa8.99□□□□□ -0.97
SHMT2-214ENST00000554604 XCL2Q9UBD3 114 aa8.99□□□□□ -0.97
SHMT2-214ENST00000554604 NAGKQ9UJ70 344 aa8.99□□□□□ -0.97
SHMT2-214ENST00000554604 HLA-DRB4X5D2U9 266 aa8.99□□□□□ -0.97
SHMT2-214ENST00000554604 IGHV4-28A0A0C4DH34 117 aa8.98□□□□□ -0.97
SHMT2-214ENST00000554604 SNAI2O43623 268 aa8.98□□□□□ -0.97
SHMT2-214ENST00000554604 OR5AL1P0C617 328 aa8.98□□□□□ -0.97
SHMT2-214ENST00000554604 PMCHP20382 165 aa8.98□□□□□ -0.97
SHMT2-214ENST00000554604 NTF3P20783 257 aa8.98□□□□□ -0.97
SHMT2-214ENST00000554604 DEFB1P60022 68 aa8.98□□□□□ -0.97
SHMT2-214ENST00000554604 CACNG7P62955 275 aa8.98□□□□□ -0.97
SHMT2-214ENST00000554604 PRR9Q5T870 116 aa8.98□□□□□ -0.97
SHMT2-214ENST00000554604 RNASEKQ6P5S7 137 aaKnown RBP8.98□□□□□ -0.97
SHMT2-214ENST00000554604 LINC00476Q8WZB0 136 aa8.98□□□□□ -0.97
SHMT2-214ENST00000554604 RYR2Q92736 4967 aa8.97□□□□□ -0.97
SHMT2-214ENST00000554604 IGHV4-4A0A075B6R2 117 aa8.97□□□□□ -0.97
SHMT2-214ENST00000554604 SCGB1D1O95968 90 aa8.97□□□□□ -0.97
SHMT2-214ENST00000554604 MED14OSP0DP75 135 aa8.97□□□□□ -0.97
SHMT2-214ENST00000554604 RAB4AP20338 218 aa8.97□□□□□ -0.97
SHMT2-214ENST00000554604 PKIAP61925 76 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms