RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 AP5S1Q9NUS5 200 aa8.89□□□□□ -0.99
SHMT2-212ENST00000554467 FABP2P12104 132 aa8.89□□□□□ -0.99
SHMT2-212ENST00000554467 USMG5Q96IX5 58 aa8.89□□□□□ -0.99
SHMT2-212ENST00000554467 C20orf173Q96LM9 149 aa8.89□□□□□ -0.99
SHMT2-212ENST00000554467 PSMG3-AS1Q96PY0 264 aa8.89□□□□□ -0.99
SHMT2-212ENST00000554467 NPIPB6E9PJ23 425 aa8.89□□□□□ -0.99
SHMT2-212ENST00000554467 Q6YL49 198 aa8.89□□□□□ -0.99
SHMT2-212ENST00000554467 AMN1Q8IY45 258 aa8.89□□□□□ -0.99
SHMT2-212ENST00000554467 FSHBP01225 129 aa8.88□□□□□ -0.99
SHMT2-212ENST00000554467 FXYD2P54710 66 aa8.88□□□□□ -0.99
SHMT2-212ENST00000554467 RIGQ13278 110 aa8.88□□□□□ -0.99
SHMT2-212ENST00000554467 PHLDA1Q8WV24 401 aaPredicted RBP8.88□□□□□ -0.99
SHMT2-212ENST00000554467 U3KQE9 123 aa8.88□□□□□ -0.99
SHMT2-212ENST00000554467 D6R8Y8 96 aa8.88□□□□□ -0.99
SHMT2-212ENST00000554467 ORM1P02763 201 aa8.88□□□□□ -0.99
SHMT2-212ENST00000554467 PSMB8P28062 276 aa8.88□□□□□ -0.99
SHMT2-212ENST00000554467 IFI27P40305 119 aaPredicted RBP8.88□□□□□ -0.99
SHMT2-212ENST00000554467 LYZL1Q6UWQ5 148 aa8.88□□□□□ -0.99
SHMT2-212ENST00000554467 LRRC75A-AS1Q8N1F1 130 aa8.88□□□□□ -0.99
SHMT2-212ENST00000554467 GLMPQ8WWB7 406 aa8.88□□□□□ -0.99
SHMT2-212ENST00000554467 NDUFA4O00483 81 aa8.87□□□□□ -0.99
SHMT2-212ENST00000554467 CT83Q5H943 113 aa8.87□□□□□ -0.99
SHMT2-212ENST00000554467 AGPAT4-IT1Q9H0P7 198 aa8.87□□□□□ -0.99
SHMT2-212ENST00000554467 F6UB75 175 aa8.87□□□□□ -0.99
SHMT2-212ENST00000554467 C18orf65Q6ZTR6 163 aa8.87□□□□□ -0.99
SHMT2-212ENST00000554467 GPHB5Q86YW7 130 aa8.87□□□□□ -0.99
SHMT2-212ENST00000554467 RHPN1-AS1Q9BWJ2 59 aa8.87□□□□□ -0.99
SHMT2-212ENST00000554467 TRBV6-1A0A0K0K1D8 114 aa8.87□□□□□ -0.99
SHMT2-212ENST00000554467 TWIST1Q15672 202 aa8.87□□□□□ -0.99
SHMT2-212ENST00000554467 TCTEX1D4Q5JR98 221 aa8.87□□□□□ -0.99
SHMT2-212ENST00000554467 DPF1Q92782 380 aa8.87□□□□□ -0.99
SHMT2-212ENST00000554467 TTTY13Q9BZ97 58 aa8.87□□□□□ -0.99
SHMT2-212ENST00000554467 ZNF702PQ9H963 129 aa8.87□□□□□ -0.99
SHMT2-212ENST00000554467 OTOGQ6ZRI0 2925 aa8.87□□□□□ -0.99
SHMT2-212ENST00000554467 DEFB136Q30KP8 78 aa8.86□□□□□ -0.99
SHMT2-212ENST00000554467 MTURNQ8N3F0 131 aa8.86□□□□□ -0.99
SHMT2-212ENST00000554467 GEMIN7Q9H840 131 aaKnown RBP8.86□□□□□ -0.99
SHMT2-212ENST00000554467 ANK3Q12955 4377 aaKnown RBP8.86□□□□□ -0.99
SHMT2-212ENST00000554467 H3BUA1 57 aa8.86□□□□□ -0.99
SHMT2-212ENST00000554467 TMEM190Q8WZ59 177 aa8.86□□□□□ -0.99
SHMT2-212ENST00000554467 SETXQ7Z333 2677 aaKnown RBP8.86□□□□□ -0.99
SHMT2-212ENST00000554467 ETDBQ3ZM63 59 aa8.85□□□□□ -0.99
SHMT2-212ENST00000554467 CFAP161Q6P656 301 aa8.85□□□□□ -0.99
SHMT2-212ENST00000554467 DUX3Q96PT4 197 aa8.85□□□□□ -0.99
SHMT2-212ENST00000554467 SLC50A1Q9BRV3 221 aa8.85□□□□□ -0.99
SHMT2-212ENST00000554467 GFRA4Q9GZZ7 299 aa8.85□□□□□ -0.99
SHMT2-212ENST00000554467 SIVA1O15304 175 aa8.85□□□□□ -0.99
SHMT2-212ENST00000554467 SMIM13P0DJ93 91 aa8.85□□□□□ -0.99
SHMT2-212ENST00000554467 OR9G4Q8NGQ1 327 aa8.85□□□□□ -0.99
SHMT2-212ENST00000554467 AGRNO00468 2067 aa8.85□□□□□ -0.99
SHMT2-212ENST00000554467 CACNG7P62955 275 aa8.84□□□□□ -0.99
SHMT2-212ENST00000554467 FLNBO75369 2602 aaKnown RBP8.84□□□□□ -0.99
SHMT2-212ENST00000554467 IGKV2D-26A0A0A0MRZ7 120 aa8.84□□□□□ -0.99
SHMT2-212ENST00000554467 HAX1O00165 279 aa8.84□□□□□ -0.99
SHMT2-212ENST00000554467 NMUP48645 174 aa8.84□□□□□ -0.99
SHMT2-212ENST00000554467 TMEM78Q5T7P6 136 aa8.84□□□□□ -0.99
SHMT2-212ENST00000554467 C11orf44Q8N8P7 122 aa8.84□□□□□ -0.99
SHMT2-212ENST00000554467 MRAP2Q96G30 205 aa8.84□□□□□ -0.99
SHMT2-212ENST00000554467 PRELID3AQ96N28 172 aa8.84□□□□□ -0.99
SHMT2-212ENST00000554467 MSRB1Q9NZV6 116 aa8.84□□□□□ -0.99
SHMT2-212ENST00000554467 NOTCH3Q9UM47 2321 aa8.84□□□□□ -0.99
SHMT2-212ENST00000554467 JMJD1CQ15652 2540 aa8.84□□□□□ -0.99
SHMT2-212ENST00000554467 IGHV7-4-1A0A0J9YVY3 117 aa8.84□□□□□ -0.99
SHMT2-212ENST00000554467 H3BMG7 143 aa8.84□□□□□ -0.99
SHMT2-212ENST00000554467 CKS2P33552 79 aa8.84□□□□□ -0.99
SHMT2-212ENST00000554467 SYNJ2BPP57105 145 aa8.84□□□□□ -0.99
SHMT2-212ENST00000554467 KHDC1LQ5JSQ8 128 aa8.84□□□□□ -0.99
SHMT2-212ENST00000554467 DAZ1Q9NQZ3 744 aaKnown RBP8.84□□□□□ -0.99
SHMT2-212ENST00000554467 C11orf21Q9P2W6 132 aa8.84□□□□□ -0.99
SHMT2-212ENST00000554467 HIVEP2P31629 2446 aa8.84□□□□□ -0.99
SHMT2-212ENST00000554467 SPRY2O43597 315 aa8.83□□□□□ -1
SHMT2-212ENST00000554467 EVI2AP22794 236 aa8.83□□□□□ -1
SHMT2-212ENST00000554467 ZNF575Q86XF7 245 aa8.83□□□□□ -1
SHMT2-212ENST00000554467 IGHV4OR15-8A0A075B7B6 117 aa8.83□□□□□ -1
SHMT2-212ENST00000554467 A0A087WW49 117 aa8.83□□□□□ -1
SHMT2-212ENST00000554467 A6NJY4 79 aa8.83□□□□□ -1
SHMT2-212ENST00000554467 TSPAN13O95857 204 aa8.83□□□□□ -1
SHMT2-212ENST00000554467 PRR9Q5T870 116 aa8.83□□□□□ -1
SHMT2-212ENST00000554467 C20orf78Q9BR46 151 aa8.83□□□□□ -1
SHMT2-212ENST00000554467 GCSHP23434 173 aa8.83□□□□□ -1
SHMT2-212ENST00000554467 AMTNQ6UX39 209 aa8.83□□□□□ -1
SHMT2-212ENST00000554467 FHL3Q13643 280 aa8.82□□□□□ -1
SHMT2-212ENST00000554467 LGALS9BQ3B8N2 356 aa8.82□□□□□ -1
SHMT2-212ENST00000554467 LGALS9CQ6DKI2 356 aa8.82□□□□□ -1
SHMT2-212ENST00000554467 C9orf139Q6ZV77 190 aa8.82□□□□□ -1
SHMT2-212ENST00000554467 DKK2Q9UBU2 259 aa8.82□□□□□ -1
SHMT2-212ENST00000554467 PRO0461Q9UI25 63 aa8.82□□□□□ -1
SHMT2-212ENST00000554467 F8W1H4 67 aa8.82□□□□□ -1
SHMT2-212ENST00000554467 CDIP1Q9H305 208 aa8.82□□□□□ -1
SHMT2-212ENST00000554467 SIGLEC8Q9NYZ4 499 aa8.82□□□□□ -1
SHMT2-212ENST00000554467 E9PLD3 99 aa8.81□□□□□ -1
SHMT2-212ENST00000554467 BRI3O95415 125 aa8.81□□□□□ -1
SHMT2-212ENST00000554467 SMR3AQ99954 134 aa8.81□□□□□ -1
SHMT2-212ENST00000554467 FABP5P3A8MUU1 101 aa8.81□□□□□ -1
SHMT2-212ENST00000554467 ORMDL3Q8N138 153 aa8.81□□□□□ -1
SHMT2-212ENST00000554467 PGPEP1Q9NXJ5 209 aa8.81□□□□□ -1
SHMT2-212ENST00000554467 SOCS3O14543 225 aa8.8□□□□□ -1
SHMT2-212ENST00000554467 YAE1D1Q9NRH1 226 aa8.8□□□□□ -1
SHMT2-212ENST00000554467 IGKV3D-20A0A0C4DH25 116 aa8.8□□□□□ -1
SHMT2-212ENST00000554467 GAS8-AS1O95177 125 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms