RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 GAGE5Q13069 117 aa11.63□□□□□ -0.55
SYNE2-211ENST00000553801 GAGE13Q4V321 117 aa11.63□□□□□ -0.55
SYNE2-211ENST00000553801 MZT2BQ6NZ67 158 aa11.63□□□□□ -0.55
SYNE2-211ENST00000553801 ZFP2Q6ZN57 461 aa11.63□□□□□ -0.55
SYNE2-211ENST00000553801 URGCP-MRPS24S4R325 110 aa11.63□□□□□ -0.55
SYNE2-211ENST00000553801 FGF8P55075 233 aaPredicted RBP11.62□□□□□ -0.55
SYNE2-211ENST00000553801 GNG5P63218 68 aa11.62□□□□□ -0.55
SYNE2-211ENST00000553801 CIRBP-AS1Q8TBR5 109 aa11.62□□□□□ -0.55
SYNE2-211ENST00000553801 CCDC32Q9BV29 185 aa11.62□□□□□ -0.55
SYNE2-211ENST00000553801 C11orf21Q9P2W6 132 aa11.62□□□□□ -0.55
SYNE2-211ENST00000553801 IGKV2D-24A0A075B6R9 120 aa11.61□□□□□ -0.55
SYNE2-211ENST00000553801 A8MWV9 139 aa11.61□□□□□ -0.55
SYNE2-211ENST00000553801 K7EQM0 130 aa11.61□□□□□ -0.55
SYNE2-211ENST00000553801 EIF3GO75821 320 aaKnown RBP eCLIP11.61□□□□□ -0.55
SYNE2-211ENST00000553801 GCGP01275 180 aa11.61□□□□□ -0.55
SYNE2-211ENST00000553801 IGLV2-8P01709 118 aa11.61□□□□□ -0.55
SYNE2-211ENST00000553801 LINC00694P0DN24 101 aa11.61□□□□□ -0.55
SYNE2-211ENST00000553801 ZNF80P51504 273 aaPredicted RBP11.61□□□□□ -0.55
SYNE2-211ENST00000553801 CYB561D1Q8N8Q1 229 aa11.61□□□□□ -0.55
SYNE2-211ENST00000553801 SGK494Q96LW2 274 aa11.61□□□□□ -0.55
SYNE2-211ENST00000553801 HSPB11Q9Y547 144 aa11.61□□□□□ -0.55
SYNE2-211ENST00000553801 FAT3Q8TDW7 4589 aa11.61□□□□□ -0.55
SYNE2-211ENST00000553801 ZFP69Q49AA0 526 aa11.6□□□□□ -0.55
SYNE2-211ENST00000553801 PIK3CD-AS1Q5SR53 167 aa11.6□□□□□ -0.55
SYNE2-211ENST00000553801 PARLQ9H300 379 aa11.6□□□□□ -0.55
SYNE2-211ENST00000553801 RNASE3P12724 160 aaKnown RBP11.59□□□□□ -0.55
SYNE2-211ENST00000553801 LGALSLQ3ZCW2 172 aaPredicted RBP11.59□□□□□ -0.55
SYNE2-211ENST00000553801 SMUG1Q53HV7 270 aa11.59□□□□□ -0.55
SYNE2-211ENST00000553801 C5orf17Q8NAS9 161 aa11.59□□□□□ -0.55
SYNE2-211ENST00000553801 UBR4Q5T4S7 5183 aa11.59□□□□□ -0.55
SYNE2-211ENST00000553801 TCRAP04437 139 aa11.58□□□□□ -0.56
SYNE2-211ENST00000553801 S100A4P26447 101 aaKnown RBP11.58□□□□□ -0.56
SYNE2-211ENST00000553801 ELOBQ15370 118 aa11.58□□□□□ -0.56
SYNE2-211ENST00000553801 TMEM75Q8N9X5 138 aa11.58□□□□□ -0.56
SYNE2-211ENST00000553801 OR10G9Q8NGN4 311 aa11.58□□□□□ -0.56
SYNE2-211ENST00000553801 OR2T35Q8NGX2 323 aa11.58□□□□□ -0.56
SYNE2-211ENST00000553801 PPP1R1CQ8WVI7 109 aa11.58□□□□□ -0.56
SYNE2-211ENST00000553801 SMIM3Q9BZL3 60 aa11.58□□□□□ -0.56
SYNE2-211ENST00000553801 PSG8Q9UQ74 426 aa11.58□□□□□ -0.56
SYNE2-211ENST00000553801 PET100P0DJ07 73 aa11.57□□□□□ -0.56
SYNE2-211ENST00000553801 C14orf177Q52M58 125 aa11.57□□□□□ -0.56
SYNE2-211ENST00000553801 NIT1Q86X76 327 aa11.57□□□□□ -0.56
SYNE2-211ENST00000553801 LINC00479Q96M42 142 aa11.57□□□□□ -0.56
SYNE2-211ENST00000553801 KLK12Q9UKR0 248 aa11.57□□□□□ -0.56
SYNE2-211ENST00000553801 IGLV2-11P01706 119 aa11.56□□□□□ -0.56
SYNE2-211ENST00000553801 RPL12P30050 165 aaKnown RBP11.56□□□□□ -0.56
SYNE2-211ENST00000553801 RAB2AP61019 212 aa11.56□□□□□ -0.56
SYNE2-211ENST00000553801 FLI1Q01543 452 aaPredicted RBP11.56□□□□□ -0.56
SYNE2-211ENST00000553801 KCNIP4Q6PIL6 250 aa11.56□□□□□ -0.56
SYNE2-211ENST00000553801 OR10G7Q8NGN6 311 aa11.56□□□□□ -0.56
SYNE2-211ENST00000553801 UBE2WQ96B02 151 aa11.56□□□□□ -0.56
SYNE2-211ENST00000553801 CHCHD7Q9BUK0 85 aa11.56□□□□□ -0.56
SYNE2-211ENST00000553801 SAMD10Q9BYL1 202 aa11.56□□□□□ -0.56
SYNE2-211ENST00000553801 A0A087WX48 190 aa11.55□□□□□ -0.56
SYNE2-211ENST00000553801 HMGB3O15347 200 aaKnown RBP11.55□□□□□ -0.56
SYNE2-211ENST00000553801 RPL37AP61513 92 aaKnown RBP11.55□□□□□ -0.56
SYNE2-211ENST00000553801 SAPCD1Q5SSQ6 148 aa11.55□□□□□ -0.56
SYNE2-211ENST00000553801 PRNTQ86SH4 94 aa11.55□□□□□ -0.56
SYNE2-211ENST00000553801 ENKURQ8TC29 256 aa11.55□□□□□ -0.56
SYNE2-211ENST00000553801 RHODO00212 210 aa11.54□□□□□ -0.56
SYNE2-211ENST00000553801 MPC2O95563 127 aa11.54□□□□□ -0.56
SYNE2-211ENST00000553801 ARL14EPLP0DKL9 152 aa11.54□□□□□ -0.56
SYNE2-211ENST00000553801 ASIPP42127 132 aa11.54□□□□□ -0.56
SYNE2-211ENST00000553801 Q0VG73 95 aa11.54□□□□□ -0.56
SYNE2-211ENST00000553801 C14orf178Q8N769 122 aaPredicted RBP11.54□□□□□ -0.56
SYNE2-211ENST00000553801 Q9UF83 564 aa11.54□□□□□ -0.56
SYNE2-211ENST00000553801 CDC34P49427 236 aaPredicted RBP11.53□□□□□ -0.56
SYNE2-211ENST00000553801 H2BFSP57053 126 aa11.53□□□□□ -0.56
SYNE2-211ENST00000553801 UFSP1Q6NVU6 142 aa11.53□□□□□ -0.56
SYNE2-211ENST00000553801 ATRAIDQ6UW56 229 aa11.53□□□□□ -0.56
SYNE2-211ENST00000553801 DNAJC30Q96LL9 226 aa11.53□□□□□ -0.56
SYNE2-211ENST00000553801 EPDR1Q9UM22 224 aa11.53□□□□□ -0.56
SYNE2-211ENST00000553801 IGKV3D-20A0A0C4DH25 116 aa11.52□□□□□ -0.57
SYNE2-211ENST00000553801 STAG3L2P0CL84 134 aa11.52□□□□□ -0.57
SYNE2-211ENST00000553801 STAG3L3P0CL85 134 aa11.52□□□□□ -0.57
SYNE2-211ENST00000553801 SUMO1P63165 101 aaKnown RBP11.52□□□□□ -0.57
SYNE2-211ENST00000553801 DMRTA1Q5VZB9 504 aa11.52□□□□□ -0.57
SYNE2-211ENST00000553801 JPT2Q9H910 190 aa11.52□□□□□ -0.57
SYNE2-211ENST00000553801 WFDC1Q9HC57 220 aa11.52□□□□□ -0.57
SYNE2-211ENST00000553801 PKHD1L1Q86WI1 4243 aa11.52□□□□□ -0.57
SYNE2-211ENST00000553801 FABP5P3A8MUU1 101 aa11.51□□□□□ -0.57
SYNE2-211ENST00000553801 OR2G3Q8NGZ4 309 aa11.51□□□□□ -0.57
SYNE2-211ENST00000553801 SUN5Q8TC36 379 aa11.51□□□□□ -0.57
SYNE2-211ENST00000553801 IL36BQ9NZH7 164 aa11.51□□□□□ -0.57
SYNE2-211ENST00000553801 GCHFRP30047 84 aa11.5□□□□□ -0.57
SYNE2-211ENST00000553801 C1orf43Q9BWL3 253 aa11.5□□□□□ -0.57
SYNE2-211ENST00000553801 TMEM167BQ9NRX6 74 aa11.5□□□□□ -0.57
SYNE2-211ENST00000553801 NDUFA13Q9P0J0 144 aa11.5□□□□□ -0.57
SYNE2-211ENST00000553801 INMT-MINDY4F8WBC2 141 aa11.49□□□□□ -0.57
SYNE2-211ENST00000553801 RAB24Q969Q5 203 aa11.49□□□□□ -0.57
SYNE2-211ENST00000553801 B4DEV8 164 aa11.48□□□□□ -0.57
SYNE2-211ENST00000553801 FAM74A4Q5TZK3 123 aa11.48□□□□□ -0.57
SYNE2-211ENST00000553801 OR11H4Q8NGC9 324 aa11.48□□□□□ -0.57
SYNE2-211ENST00000553801 TRBV10-1A0A0K0K1A3 114 aa11.47□□□□□ -0.57
SYNE2-211ENST00000553801 TMEM262E9PQX1 116 aa11.47□□□□□ -0.57
SYNE2-211ENST00000553801 H3BVH4 76 aa11.47□□□□□ -0.57
SYNE2-211ENST00000553801 SSNA1O43805 119 aa11.47□□□□□ -0.57
SYNE2-211ENST00000553801 CRPP02741 224 aa11.47□□□□□ -0.57
SYNE2-211ENST00000553801 RPL36AP83881 106 aaKnown RBP11.47□□□□□ -0.57
SYNE2-211ENST00000553801 LINC00299Q6ZSB3 139 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms