RNA–Protein interactions for RNA: ENST00000553673.1

FCF1-204, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-204ENST00000553673 SMIM3Q9BZL3 60 aa2.37□□□□□ -2.03
FCF1-204ENST00000553673 WDR61Q9GZS3 305 aaKnown RBP2.37□□□□□ -2.03
FCF1-204ENST00000553673 ARL6Q9H0F7 186 aa2.37□□□□□ -2.03
FCF1-204ENST00000553673 ARV1Q9H2C2 271 aa2.37□□□□□ -2.03
FCF1-204ENST00000553673 SLC39A9Q9NUM3 307 aa2.37□□□□□ -2.03
FCF1-204ENST00000553673 PSG8Q9UQ74 426 aa2.37□□□□□ -2.03
FCF1-204ENST00000553673 HIGD1AQ9Y241 93 aa2.37□□□□□ -2.03
FCF1-204ENST00000553673 HSPB11Q9Y547 144 aa2.37□□□□□ -2.03
FCF1-204ENST00000553673 PXMP4Q9Y6I8 212 aa2.37□□□□□ -2.03
FCF1-204ENST00000553673 U3KQK5 164 aa2.37□□□□□ -2.03
FCF1-204ENST00000553673 DSCAML1Q8TD84 2053 aa2.37□□□□□ -2.03
FCF1-204ENST00000553673 FXYD6-FXYD2A0A087WZ82 144 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 TRAV5A0A0B4J249 113 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 ZNF705GA8MUZ8 300 aaPredicted RBP2.36□□□□□ -2.03
FCF1-204ENST00000553673 F6UB75 175 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 SMLR1H3BR10 107 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 MRPS12O15235 138 aaKnown RBP2.36□□□□□ -2.03
FCF1-204ENST00000553673 IFNA5P01569 189 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 RPL7P18124 248 aaKnown RBP2.36□□□□□ -2.03
FCF1-204ENST00000553673 PSMB3P49720 205 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 SNRPD3P62318 126 aaKnown RBP2.36□□□□□ -2.03
FCF1-204ENST00000553673 MOBPQ13875 183 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 ACTL10Q5JWF8 245 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 SAMD13Q5VXD3 122 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 C10orf113Q5VZT2 155 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 LINC00305Q7Z4B0 112 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 LYPD1Q8N2G4 141 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 RNF182Q8N6D2 247 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 ZNF709Q8N972 641 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 OR2T35Q8NGX2 323 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 GPR82Q96P67 336 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 AQP10Q96PS8 301 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 TM2D3Q9BRN9 247 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 NPCDR1Q9BY65 106 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 WFDC1Q9HC57 220 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 RETNQ9HD89 108 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 KCNIP2Q9NS61 270 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 GOLT1BQ9Y3E0 138 aa2.36□□□□□ -2.03
FCF1-204ENST00000553673 TET2Q6N021 2002 aaPredicted RBP2.35□□□□□ -2.03
FCF1-204ENST00000553673 NBEAL1Q6ZS30 2694 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 IGLV2-18A0A075B6J9 118 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 TRAV8-2A0A0B4J237 113 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 C17orf112F2Z3M2 114 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 G3V3Q6 166 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 H3BMM0 161 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 H3BQ15 152 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 ISLRO14498 428 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 CXCL2P19875 107 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 HLA-DMBP28068 263 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 DEFB1P60022 68 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 ZNF266Q14584 549 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 GCSAMLQ5JQS6 135 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 FAM78BQ5VT40 261 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 SPATA31B1PQ5VZV4 182 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 Q5W150 140 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 EBLN2Q6P2I7 272 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 IGFL1Q6UW32 110 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 FOXI2Q6ZQN5 318 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 MIR17HGQ75NE6 70 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 BPIFA4PQ86YQ2 179 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 INO80EQ8NBZ0 244 aaPredicted RBP2.35□□□□□ -2.03
FCF1-204ENST00000553673 ZNF738Q8NE65 137 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 LRRC20Q8TCA0 184 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 PFDN5Q99471 154 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 PARD6GQ9BYG4 376 aaPredicted RBP2.35□□□□□ -2.03
FCF1-204ENST00000553673 TNFSF18Q9UNG2 199 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 TP53TG1Q9Y2A0 90 aa2.35□□□□□ -2.03
FCF1-204ENST00000553673 TRBV19A0A075B6N1 114 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 BORCS7-ASMTA0A0B4J1R7 106 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 A0A0J9YX75 114 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 SLC17A3O00476 420 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 ARPC5O15511 151 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 ZNF705DP0CH99 300 aaPredicted RBP2.34□□□□□ -2.03
FCF1-204ENST00000553673 ZNF705BP0CI00 300 aaPredicted RBP2.34□□□□□ -2.03
FCF1-204ENST00000553673 IGLC2P0DOY2 106 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 PYYP10082 97 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 PRB4P10163 310 aaPredicted RBP2.34□□□□□ -2.03
FCF1-204ENST00000553673 HIST1H1EP10412 219 aaKnown RBP2.34□□□□□ -2.03
FCF1-204ENST00000553673 HLA-DRB4P13762 266 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 M6PRP20645 277 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 ATP6V0CP27449 155 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 FXYD7P58549 80 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 TAS2R45P59539 299 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 RAB2AP61019 212 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 PSG9Q00887 426 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 HIST1H1AQ02539 215 aaPredicted RBP2.34□□□□□ -2.03
FCF1-204ENST00000553673 PSG3Q16557 428 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 GUK1Q16774 197 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 DEFB135Q30KP9 77 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 ACOT6Q3I5F7 207 aaPredicted RBP2.34□□□□□ -2.03
FCF1-204ENST00000553673 GDF5OSQ5U4N7 250 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 RPL7L1Q6DKI1 246 aaKnown RBP2.34□□□□□ -2.03
FCF1-204ENST00000553673 RNASEKQ6P5S7 137 aaKnown RBP2.34□□□□□ -2.03
FCF1-204ENST00000553673 MORN3Q6PF18 240 aaPredicted RBP2.34□□□□□ -2.03
FCF1-204ENST00000553673 LCN15Q6UWW0 184 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 OR4B1Q8NGF8 309 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 FAM167A-AS1Q96KT0 104 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 SLC50A1Q9BRV3 221 aa2.34□□□□□ -2.03
FCF1-204ENST00000553673 MRPL32Q9BYC8 188 aaKnown RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms