RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 LAMC3Q9Y6N6 1575 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 TRAV2A0A0B4J234 112 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 KANTRA0A1W2PQU2 76 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 hDV103S1A0JD37 113 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 LRCOL1A6NCL2 159 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 HMSDA8MTL9 139 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 IL4P05112 153 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 MPV17P39210 176 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 XCL1P47992 114 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 RHOHQ15669 191 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 KIAA2026Q5HYC2 2103 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 SPANXN1Q5VSR9 72 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 Q6ZQT7 251 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 C2orf91Q6ZV80 131 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 Q8IYB0 196 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 Q8NDZ9 215 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 OR8B3Q8NGG8 313 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 KLF14Q8TD94 323 aaPredicted RBP2.25□□□□□ -2.05
TDP1-207ENST00000553617 Q96M85 177 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 OR8B2Q96RD0 313 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 TRGV9Q99603 122 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 SMIM7Q9BQ49 75 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 NXT2Q9NPJ8 142 aaKnown RBP2.25□□□□□ -2.05
TDP1-207ENST00000553617 TRAPPC1Q9Y5R8 145 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 ICOSQ9Y6W8 199 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 GPR179Q6PRD1 2367 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 ADGRB3O60242 1522 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 KIDINS220Q9ULH0 1771 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 RPRD2Q5VT52 1461 aaKnown RBP2.25□□□□□ -2.05
TDP1-207ENST00000553617 PXDNQ92626 1479 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 E9PCH4 1651 aa2.25□□□□□ -2.05
TDP1-207ENST00000553617 KIF21BO75037 1637 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 ABCA8O94911 1581 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 SETBP1Q9Y6X0 1596 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 DUOX2Q9NRD8 1548 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 IGLV3-12A0A075B6K2 115 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 IGKV2D-26A0A0A0MRZ7 120 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 IGHV3-15A0A0B4J1V0 119 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 TRAV17A0A0B4J275 112 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 A0A0B4J2C4 111 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 A8MUU9 505 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 C17orf112F2Z3M2 114 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 CCL16O15467 120 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 CPSF4O95639 269 aaKnown RBP2.24□□□□□ -2.05
TDP1-207ENST00000553617 RNASE2P10153 161 aaKnown RBP2.24□□□□□ -2.05
TDP1-207ENST00000553617 LINC00315P59091 139 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 GNG11P61952 73 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 Q1T7F1 81 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 ESRGQ1W209 222 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 TMEM136Q6ZRR5 245 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 DYNAPQ8N1N2 210 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 LINC00269Q8N2A0 174 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 Q8N814 137 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 MUCL1Q96DR8 90 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 MRPL35Q9NZE8 188 aaKnown RBP2.24□□□□□ -2.05
TDP1-207ENST00000553617 PRO0461Q9UI25 63 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 OBSCNQ5VST9 7968 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 PTPRFP10586 1907 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 PTPRDP23468 1912 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 TOPAZ1Q8N9V7 1692 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 PLXNA3P51805 1871 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 CLTCL1P53675 1640 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 ABCA9Q8IUA7 1624 aa2.24□□□□□ -2.05
TDP1-207ENST00000553617 EXPH5Q8NEV8 1989 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 CUX1P39880 1505 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 CDC42BPAQ5VT25 1732 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 PEAK1Q9H792 1746 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 MYO5CQ9NQX4 1742 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 PRXQ9BXM0 1461 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 TRAV7A0A075B6U4 112 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 IGHV3OR16-8A0A075B7F1 116 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 NAP1L6A6NFF2 107 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 CRYM-AS1A6NIL9 109 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 C16orf90A8MZG2 172 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 B4DSR2 109 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 IGLV1-51P01701 117 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 SFTA3P0C7M3 94 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 CD24P25063 80 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 KRTAP12-2P59991 146 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 MPV17LQ2QL34 196 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 FAM229BQ4G0N7 80 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 LYZL2Q7Z4W2 148 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 FAM19A2Q8N3H0 131 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 C1orf64Q8NEQ6 169 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 DYNLRB2Q8TF09 96 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 TMEM141Q96I45 108 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 LINC00474Q9P2X8 69 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 NDUFA12Q9UI09 145 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 TIMM9Q9Y5J7 89 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 PATJQ8NI35 1801 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 PTPN23Q9H3S7 1636 aa2.23□□□□□ -2.05
TDP1-207ENST00000553617 EDC4Q6P2E9 1401 aaKnown RBP2.23□□□□□ -2.05
TDP1-207ENST00000553617 EFCAB5A4FU69 1503 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 CDK13Q14004 1512 aaKnown RBP2.22□□□□□ -2.05
TDP1-207ENST00000553617 ATP10BO94823 1461 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 KIAA1549Q9HCM3 1950 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 IGKV2-28A0A075B6P5 120 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 IGKV1D-17A0A075B6S4 117 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 IGKV1OR2-108A0A075B7D4 117 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 TRAV3A0A0B4J244 114 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms