RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 TTTY13Q9BZ97 58 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 VCX2Q9H322 139 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 EDA2RQ9HAV5 297 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 CYSLTR1Q9Y271 337 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 KIF25-AS1Q9Y6Z4 181 aa3.97□□□□□ -1.77
TMEM55B-204ENST00000553602 ANKHD1Q8IWZ3 2542 aaKnown RBP3.96□□□□□ -1.77
TMEM55B-204ENST00000553602 CEP295Q9C0D2 2601 aa3.96□□□□□ -1.77
TMEM55B-204ENST00000553602 COL6A6A6NMZ7 2263 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 TRAV26-2A0A0B4J265 109 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 TRBV27A0A0K0K1C4 114 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 GAGE12HA6NDE8 117 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 IGIPA6NJ69 53 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 G3V318 75 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 IGHV1-69P01742 117 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 IGHG2P01859 326 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 CD7P09564 240 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 RNASE3P12724 160 aaKnown RBP3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 UBE2D3P61077 147 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 UBE2D2P62837 147 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 RPL24P83731 157 aaKnown RBP3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 RHOHQ15669 191 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 NSUN5P1Q3KNT7 163 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 GAGE13Q4V321 117 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 TCTEX1D4Q5JR98 221 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 CFAP126Q5VTH2 177 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 NFE4Q86UQ8 179 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 RNF152Q8N8N0 203 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 DLX4Q92988 240 aaPredicted RBP3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 C20orf173Q96LM9 149 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 LINC01600Q96MT4 127 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 SIGMAR1Q99720 223 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 PRADC1Q9BSG0 188 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 C1QTNF4Q9BXJ3 329 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 PHLDA3Q9Y5J5 127 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 PTPRQQ9UMZ3 2332 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 USP24Q9UPU5 2620 aa3.96□□□□□ -1.78
TMEM55B-204ENST00000553602 ABCA1O95477 2261 aa3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 IGLV4-69A0A075B6H9 119 aa3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 IGHV3OR16-8A0A075B7F1 116 aa3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 IGHV3-35A0A0C4DH35 117 aa3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 A0A0J9YX75 114 aa3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 TMEM89A2RUT3 159 aa3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 PRSS29PA6NIE9 313 aa3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 ZNF815PA8K554 130 aa3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 LGALS9O00182 355 aa3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 VCYO14598 125 aa3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 HOXA3O43365 443 aaPredicted RBP3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 S100A4P26447 101 aaKnown RBP3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 CRYBA4P53673 196 aa3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 POLR2KP53803 58 aaKnown RBP3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 LINC00315P59091 139 aa3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 PMVKQ15126 192 aa3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 ANXA2RQ3ZCQ2 193 aa3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 SBSPONQ8IVN8 264 aa3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 C9orf85Q96MD7 179 aa3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 DAZ1Q9NQZ3 744 aaKnown RBP3.95□□□□□ -1.78
TMEM55B-204ENST00000553602 IGHV3-66A0A0C4DH42 116 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 A0A0J9YY99 117 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 A0A1B0GV72 72 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 A6NDX4 124 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 PRB4P10163 310 aaPredicted RBP3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 RNASE4P34096 147 aaKnown RBP3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 ID1P41134 155 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 TCTAP57738 103 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 CFHR3Q02985 330 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 SCGB2A2Q13296 93 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 WFDC2Q14508 124 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 CDSNQ15517 529 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 ZNF876PQ49A33 203 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 PIK3CD-AS1Q5SR53 167 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 ZFP2Q6ZN57 461 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 MTURNQ8N3F0 131 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 Q8N3U1 123 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 SLC25A29Q8N8R3 303 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 KIR2DL4Q99706 377 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 SPAG8Q99932 426 aaPredicted RBP3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 BPESC1Q9GZL8 116 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 MRPL16Q9NX20 251 aaKnown RBP3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 ZNF256Q9Y2P7 627 aaPredicted RBP3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 TSSC4Q9Y5U2 329 aaPredicted RBP3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 POLEQ07864 2286 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 ROS1P08922 2347 aa3.94□□□□□ -1.78
TMEM55B-204ENST00000553602 KMT2BQ9UMN6 2715 aaPredicted RBP3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 PKD1L2Q7Z442 2459 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 A0A0B4J2C4 111 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 A0A1W2PPR1 153 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 SDHAF1A6NFY7 115 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 LINC01548A6NM66 108 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 TSPAN13O95857 204 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 TSHBP01222 138 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 CRYGDP07320 174 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 MGPP08493 103 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 AZU1P20160 251 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 ETDBQ3ZM63 59 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 SUMO4Q6EEV6 95 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 FAM159AQ6UWV7 190 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 UNQ9165/PRO28630Q6UXU0 137 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 SCGB1D4Q6XE38 83 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 TEN1Q86WV5 123 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 NDUFA11Q86Y39 141 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms