RNA–Protein interactions for RNA: ENST00000553338.1

IFT43-204, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 684 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-204ENST00000553338 TRBV6-4A0A1B0GX49 114 aa13.21□□□□□ -0.29
IFT43-204ENST00000553338 FAM74A7A6NL05 159 aa13.21□□□□□ -0.29
IFT43-204ENST00000553338 TIRAPP58753 221 aa13.21□□□□□ -0.29
IFT43-204ENST00000553338 Q86TA4 180 aa13.21□□□□□ -0.29
IFT43-204ENST00000553338 PTH2Q96A98 100 aa13.21□□□□□ -0.29
IFT43-204ENST00000553338 IGKV3D-20A0A0C4DH25 116 aa13.2□□□□□ -0.3
IFT43-204ENST00000553338 IGHV3-38A0A0C4DH36 116 aa13.2□□□□□ -0.3
IFT43-204ENST00000553338 MAP1LC3B2A6NCE7 125 aa13.2□□□□□ -0.3
IFT43-204ENST00000553338 FABP5P3A8MUU1 101 aa13.2□□□□□ -0.3
IFT43-204ENST00000553338 FUSP35637 526 aaKnown RBP eCLIP13.2□□□□□ -0.3
IFT43-204ENST00000553338 C10orf126Q8N4M7 172 aa13.2□□□□□ -0.3
IFT43-204ENST00000553338 NKX6-2Q9C056 277 aaPredicted RBP13.2□□□□□ -0.3
IFT43-204ENST00000553338 MAP1LC3BQ9GZQ8 125 aa13.2□□□□□ -0.3
IFT43-204ENST00000553338 PGPEP1Q9NXJ5 209 aa13.2□□□□□ -0.3
IFT43-204ENST00000553338 ASIPP42127 132 aa13.19□□□□□ -0.3
IFT43-204ENST00000553338 HIST1H2BAQ96A08 127 aa13.19□□□□□ -0.3
IFT43-204ENST00000553338 CYTL1Q9NRR1 136 aa13.19□□□□□ -0.3
IFT43-204ENST00000553338 A0A087WTM6 91 aa13.18□□□□□ -0.3
IFT43-204ENST00000553338 TRAV8-6A0A0B4J262 113 aa13.18□□□□□ -0.3
IFT43-204ENST00000553338 SMLR1H3BR10 107 aa13.18□□□□□ -0.3
IFT43-204ENST00000553338 MGST1P10620 155 aaKnown RBP13.18□□□□□ -0.3
IFT43-204ENST00000553338 LGALSLQ3ZCW2 172 aaPredicted RBP13.18□□□□□ -0.3
IFT43-204ENST00000553338 OR10J3Q5JRS4 329 aa13.18□□□□□ -0.3
IFT43-204ENST00000553338 ABCA13Q86UQ4 5058 aa13.17□□□□□ -0.3
IFT43-204ENST00000553338 B4DEV8 164 aa13.17□□□□□ -0.3
IFT43-204ENST00000553338 CDPF1Q6NVV7 123 aa13.17□□□□□ -0.3
IFT43-204ENST00000553338 STOML3Q8TAV4 291 aa13.17□□□□□ -0.3
IFT43-204ENST00000553338 A8MWV9 139 aa13.16□□□□□ -0.3
IFT43-204ENST00000553338 UBE2G1P62253 170 aa13.16□□□□□ -0.3
IFT43-204ENST00000553338 LINC01556Q5JQF7 62 aa13.16□□□□□ -0.3
IFT43-204ENST00000553338 Q8N1X5 172 aa13.16□□□□□ -0.3
IFT43-204ENST00000553338 ZC2HC1AQ96GY0 325 aa13.16□□□□□ -0.3
IFT43-204ENST00000553338 PARLQ9H300 379 aa13.16□□□□□ -0.3
IFT43-204ENST00000553338 SCRT2Q9NQ03 307 aa13.16□□□□□ -0.3
IFT43-204ENST00000553338 H3BVH4 76 aa13.15□□□□□ -0.3
IFT43-204ENST00000553338 M0R036 132 aa13.15□□□□□ -0.3
IFT43-204ENST00000553338 CST9LP1Q5W188 147 aa13.15□□□□□ -0.3
IFT43-204ENST00000553338 ATP6V0E2Q8NHE4 81 aa13.15□□□□□ -0.3
IFT43-204ENST00000553338 FMC1Q96HJ9 113 aa13.15□□□□□ -0.3
IFT43-204ENST00000553338 ZFP30Q9Y2G7 519 aa13.15□□□□□ -0.3
IFT43-204ENST00000553338 APOBP04114 4563 aaKnown RBP13.14□□□□□ -0.31
IFT43-204ENST00000553338 PSCAO43653 123 aa13.14□□□□□ -0.31
IFT43-204ENST00000553338 SH2D1AO60880 128 aa13.14□□□□□ -0.31
IFT43-204ENST00000553338 FHITP49789 147 aa13.14□□□□□ -0.31
IFT43-204ENST00000553338 CRIP1P50238 77 aa13.14□□□□□ -0.31
IFT43-204ENST00000553338 PIK3CD-AS1Q5SR53 167 aa13.14□□□□□ -0.31
IFT43-204ENST00000553338 LELP1Q5T871 98 aa13.14□□□□□ -0.31
IFT43-204ENST00000553338 ZFP2Q6ZN57 461 aa13.14□□□□□ -0.31
IFT43-204ENST00000553338 GTSF1LQ9H1H1 148 aa13.14□□□□□ -0.31
IFT43-204ENST00000553338 IL36BQ9NZH7 164 aa13.14□□□□□ -0.31
IFT43-204ENST00000553338 BOLA1Q9Y3E2 137 aa13.14□□□□□ -0.31
IFT43-204ENST00000553338 DNAH5Q8TE73 4624 aa13.14□□□□□ -0.31
IFT43-204ENST00000553338 KRBOX1C9JBD0 128 aa13.13□□□□□ -0.31
IFT43-204ENST00000553338 IGHV3-30P01768 117 aa13.13□□□□□ -0.31
IFT43-204ENST00000553338 IGHV3-33P01772 117 aa13.13□□□□□ -0.31
IFT43-204ENST00000553338 IGHV3-30-3P0DP02 117 aa13.13□□□□□ -0.31
IFT43-204ENST00000553338 IGHV3-30-5P0DP03 117 aa13.13□□□□□ -0.31
IFT43-204ENST00000553338 FAM162BQ5T6X4 162 aa13.13□□□□□ -0.31
IFT43-204ENST00000553338 Q6ZSN1 163 aa13.13□□□□□ -0.31
IFT43-204ENST00000553338 KCNRGQ8N5I3 272 aa13.13□□□□□ -0.31
IFT43-204ENST00000553338 SYT8Q8NBV8 401 aa13.13□□□□□ -0.31
IFT43-204ENST00000553338 GRIFINA4D1Z8 144 aa13.12□□□□□ -0.31
IFT43-204ENST00000553338 GAGE12JA6NER3 117 aa13.12□□□□□ -0.31
IFT43-204ENST00000553338 ARMS2P0C7Q2 107 aa13.12□□□□□ -0.31
IFT43-204ENST00000553338 GAGE1Q13065 139 aa13.12□□□□□ -0.31
IFT43-204ENST00000553338 GAGE4Q13068 117 aa13.12□□□□□ -0.31
IFT43-204ENST00000553338 GAGE5Q13069 117 aa13.12□□□□□ -0.31
IFT43-204ENST00000553338 ZNF345Q14585 488 aa13.12□□□□□ -0.31
IFT43-204ENST00000553338 GAGE13Q4V321 117 aa13.12□□□□□ -0.31
IFT43-204ENST00000553338 TCEAL7Q9BRU2 100 aa13.12□□□□□ -0.31
IFT43-204ENST00000553338 JPT2Q9H910 190 aa13.12□□□□□ -0.31
IFT43-204ENST00000553338 Q9HAA7 133 aa13.12□□□□□ -0.31
IFT43-204ENST00000553338 IBA57-AS1B1ANH7 110 aa13.11□□□□□ -0.31
IFT43-204ENST00000553338 AKR1C3P42330 323 aa13.11□□□□□ -0.31
IFT43-204ENST00000553338 DMRTA1Q5VZB9 504 aa13.11□□□□□ -0.31
IFT43-204ENST00000553338 COX8CQ7Z4L0 72 aa13.11□□□□□ -0.31
IFT43-204ENST00000553338 OR11H4Q8NGC9 324 aa13.11□□□□□ -0.31
IFT43-204ENST00000553338 FAM213BQ8TBF2 198 aa13.11□□□□□ -0.31
IFT43-204ENST00000553338 SAMD10Q9BYL1 202 aa13.11□□□□□ -0.31
IFT43-204ENST00000553338 TMSB15BA0A087X1C1 80 aa13.1□□□□□ -0.31
IFT43-204ENST00000553338 PAGE4O60829 102 aa13.1□□□□□ -0.31
IFT43-204ENST00000553338 DNLZQ5SXM8 178 aa13.1□□□□□ -0.31
IFT43-204ENST00000553338 TRBV6-1A0A0K0K1D8 114 aa13.09□□□□□ -0.31
IFT43-204ENST00000553338 A0A1B0GV50 99 aa13.09□□□□□ -0.31
IFT43-204ENST00000553338 LTAP01374 205 aa13.09□□□□□ -0.31
IFT43-204ENST00000553338 SEC11BP0C7V7 166 aa13.09□□□□□ -0.31
IFT43-204ENST00000553338 ZNF674Q2M3X9 581 aa13.09□□□□□ -0.31
IFT43-204ENST00000553338 FAM74A4Q5TZK3 123 aa13.09□□□□□ -0.31
IFT43-204ENST00000553338 UFSP1Q6NVU6 142 aa13.09□□□□□ -0.31
IFT43-204ENST00000553338 C14orf178Q8N769 122 aaPredicted RBP13.09□□□□□ -0.31
IFT43-204ENST00000553338 SFT2D1Q8WV19 159 aa13.09□□□□□ -0.31
IFT43-204ENST00000553338 ZNF471Q9BX82 626 aaPredicted RBP13.09□□□□□ -0.31
IFT43-204ENST00000553338 PHLDA3Q9Y5J5 127 aa13.09□□□□□ -0.31
IFT43-204ENST00000553338 RHODO00212 210 aa13.08□□□□□ -0.32
IFT43-204ENST00000553338 TPT1P13693 172 aaKnown RBP13.08□□□□□ -0.32
IFT43-204ENST00000553338 LINC01559Q495D7 138 aa13.08□□□□□ -0.32
IFT43-204ENST00000553338 A0A0D9SG52 128 aa13.07□□□□□ -0.32
IFT43-204ENST00000553338 KANTRA0A1W2PQU2 76 aa13.07□□□□□ -0.32
IFT43-204ENST00000553338 HMSDA8MTL9 139 aa13.07□□□□□ -0.32
IFT43-204ENST00000553338 UMAD1C9J7I0 102 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms