RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 C11orf52Q96A22 123 aa6.05□□□□□ -1.44
CHPT1-208ENST00000552215 PRELID3AQ96N28 172 aa6.05□□□□□ -1.44
CHPT1-208ENST00000552215 IGKV3D-20A0A0C4DH25 116 aa6.05□□□□□ -1.44
CHPT1-208ENST00000552215 A8MWP6 167 aa6.05□□□□□ -1.44
CHPT1-208ENST00000552215 DEFA6Q01524 100 aa6.05□□□□□ -1.44
CHPT1-208ENST00000552215 OR10D4PQ8NGN7 298 aa6.05□□□□□ -1.44
CHPT1-208ENST00000552215 IGLV1-51P01701 117 aa6.04□□□□□ -1.44
CHPT1-208ENST00000552215 IGLV2-8P01709 118 aa6.04□□□□□ -1.44
CHPT1-208ENST00000552215 P0DMU3 169 aa6.04□□□□□ -1.44
CHPT1-208ENST00000552215 FAM231AP0DMU4 169 aa6.04□□□□□ -1.44
CHPT1-208ENST00000552215 FAM231CP0DMU5 169 aa6.04□□□□□ -1.44
CHPT1-208ENST00000552215 IGF2BP2-AS1Q96M15 143 aa6.04□□□□□ -1.44
CHPT1-208ENST00000552215 PRSS1P07477 247 aa6.04□□□□□ -1.44
CHPT1-208ENST00000552215 HLA-DRB4P13762 266 aa6.04□□□□□ -1.44
CHPT1-208ENST00000552215 RPS20P60866 119 aaKnown RBP6.04□□□□□ -1.44
CHPT1-208ENST00000552215 DAD1P61803 113 aa6.04□□□□□ -1.44
CHPT1-208ENST00000552215 ATOH7Q8N100 152 aa6.04□□□□□ -1.44
CHPT1-208ENST00000552215 TNFRSF18Q9Y5U5 241 aa6.04□□□□□ -1.44
CHPT1-208ENST00000552215 HLA-DRB4X5D2U9 266 aa6.04□□□□□ -1.44
CHPT1-208ENST00000552215 PKD1L1Q8TDX9 2849 aa6.04□□□□□ -1.44
CHPT1-208ENST00000552215 TCAPO15273 167 aa6.04□□□□□ -1.44
CHPT1-208ENST00000552215 IGLV2-11P01706 119 aa6.04□□□□□ -1.44
CHPT1-208ENST00000552215 TYMSP04818 313 aa6.04□□□□□ -1.44
CHPT1-208ENST00000552215 WDR73Q6P4I2 378 aa6.04□□□□□ -1.44
CHPT1-208ENST00000552215 Q6ZTI0 123 aa6.04□□□□□ -1.44
CHPT1-208ENST00000552215 C1QTNF4Q9BXJ3 329 aa6.04□□□□□ -1.44
CHPT1-208ENST00000552215 ADARB2-AS1A8MUL3 147 aa6.03□□□□□ -1.44
CHPT1-208ENST00000552215 SLAQ13239 276 aa6.03□□□□□ -1.44
CHPT1-208ENST00000552215 TRGV11A0A075B6L2 103 aa6.03□□□□□ -1.44
CHPT1-208ENST00000552215 COLCA2A8K830 154 aa6.03□□□□□ -1.44
CHPT1-208ENST00000552215 ZFAND2AQ8N6M9 145 aa6.03□□□□□ -1.44
CHPT1-208ENST00000552215 AP1S3Q96PC3 154 aa6.03□□□□□ -1.44
CHPT1-208ENST00000552215 CITED1Q99966 193 aa6.03□□□□□ -1.44
CHPT1-208ENST00000552215 APOC4P55056 127 aa6.03□□□□□ -1.44
CHPT1-208ENST00000552215 C9orf47Q6ZRZ4 202 aa6.03□□□□□ -1.44
CHPT1-208ENST00000552215 TMEM256Q8N2U0 113 aa6.03□□□□□ -1.44
CHPT1-208ENST00000552215 F2Z2F3 143 aa6.02□□□□□ -1.45
CHPT1-208ENST00000552215 RNASE13Q5GAN3 156 aaKnown RBP6.02□□□□□ -1.45
CHPT1-208ENST00000552215 A0A087X0K7 114 aa6.02□□□□□ -1.45
CHPT1-208ENST00000552215 RBMY1BA6NDE4 496 aaKnown RBP6.02□□□□□ -1.45
CHPT1-208ENST00000552215 RBMY1EA6NEQ0 496 aaKnown RBP6.02□□□□□ -1.45
CHPT1-208ENST00000552215 HLA-DQA1P01909 254 aa6.02□□□□□ -1.45
CHPT1-208ENST00000552215 OR5AL1P0C617 328 aa6.02□□□□□ -1.45
CHPT1-208ENST00000552215 RBMY1DP0C7P1 496 aaKnown RBP6.02□□□□□ -1.45
CHPT1-208ENST00000552215 OR10J3Q5JRS4 329 aa6.01□□□□□ -1.45
CHPT1-208ENST00000552215 RPL39LQ96EH5 51 aaKnown RBP6.01□□□□□ -1.45
CHPT1-208ENST00000552215 ZNF747Q9BV97 191 aa6.01□□□□□ -1.45
CHPT1-208ENST00000552215 TRRAPQ9Y4A5 3859 aa6.01□□□□□ -1.45
CHPT1-208ENST00000552215 ZNRF2Q8NHG8 242 aa6.01□□□□□ -1.45
CHPT1-208ENST00000552215 INSL3P51460 131 aa6.01□□□□□ -1.45
CHPT1-208ENST00000552215 CMC4P56277 68 aaPredicted RBP6.01□□□□□ -1.45
CHPT1-208ENST00000552215 AMMECR1LQ6DCA0 310 aa6.01□□□□□ -1.45
CHPT1-208ENST00000552215 CLPSL2Q6UWE3 100 aa6.01□□□□□ -1.45
CHPT1-208ENST00000552215 FAM222AQ5U5X8 452 aa6.01□□□□□ -1.45
CHPT1-208ENST00000552215 NPIPB6E9PJ23 425 aa6□□□□□ -1.45
CHPT1-208ENST00000552215 SERF1AO75920 110 aa6□□□□□ -1.45
CHPT1-208ENST00000552215 ORMDL3Q8N138 153 aa6□□□□□ -1.45
CHPT1-208ENST00000552215 TCEAL7Q9BRU2 100 aa6□□□□□ -1.45
CHPT1-208ENST00000552215 CHCHD5Q9BSY4 110 aa6□□□□□ -1.45
CHPT1-208ENST00000552215 TRAV25A0A0B4J276 109 aa6□□□□□ -1.45
CHPT1-208ENST00000552215 GAS8-AS1O95177 125 aa6□□□□□ -1.45
CHPT1-208ENST00000552215 MYOZ3Q8TDC0 251 aa6□□□□□ -1.45
CHPT1-208ENST00000552215 MAP1LC3AQ9H492 121 aa6□□□□□ -1.45
CHPT1-208ENST00000552215 ZNF580Q9UK33 172 aa6□□□□□ -1.45
CHPT1-208ENST00000552215 IFI27P40305 119 aaPredicted RBP6□□□□□ -1.45
CHPT1-208ENST00000552215 FHL3Q13643 280 aa6□□□□□ -1.45
CHPT1-208ENST00000552215 RNF152Q8N8N0 203 aa6□□□□□ -1.45
CHPT1-208ENST00000552215 MRPL53Q96EL3 112 aaKnown RBP6□□□□□ -1.45
CHPT1-208ENST00000552215 STAB2Q8WWQ8 2551 aa5.99□□□□□ -1.45
CHPT1-208ENST00000552215 A0A087WWC5 75 aa5.99□□□□□ -1.45
CHPT1-208ENST00000552215 HIST1H2BKO60814 126 aa5.99□□□□□ -1.45
CHPT1-208ENST00000552215 HIST1H2BJP06899 126 aa5.99□□□□□ -1.45
CHPT1-208ENST00000552215 HIST1H2BOP23527 126 aa5.99□□□□□ -1.45
CHPT1-208ENST00000552215 HIST1H2BBP33778 126 aa5.99□□□□□ -1.45
CHPT1-208ENST00000552215 HIST1H2BDP58876 126 aa5.99□□□□□ -1.45
CHPT1-208ENST00000552215 HIST1H2BCP62807 126 aa5.99□□□□□ -1.45
CHPT1-208ENST00000552215 HIST2H2BEQ16778 126 aa5.99□□□□□ -1.45
CHPT1-208ENST00000552215 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.99□□□□□ -1.45
CHPT1-208ENST00000552215 HIST1H2BHQ93079 126 aa5.99□□□□□ -1.45
CHPT1-208ENST00000552215 HIST1H2BNQ99877 126 aa5.99□□□□□ -1.45
CHPT1-208ENST00000552215 HIST1H2BMQ99879 126 aa5.99□□□□□ -1.45
CHPT1-208ENST00000552215 ZMAT4Q9H898 229 aa5.99□□□□□ -1.45
CHPT1-208ENST00000552215 SOCS3O14543 225 aa5.99□□□□□ -1.45
CHPT1-208ENST00000552215 MRPL51Q4U2R6 128 aaKnown RBP5.99□□□□□ -1.45
CHPT1-208ENST00000552215 PYGO2Q9BRQ0 406 aa5.99□□□□□ -1.45
CHPT1-208ENST00000552215 MLST8Q9BVC4 326 aa5.99□□□□□ -1.45
CHPT1-208ENST00000552215 FBLL1A6NHQ2 334 aaKnown RBP5.98□□□□□ -1.45
CHPT1-208ENST00000552215 UBE2L6O14933 153 aa5.98□□□□□ -1.45
CHPT1-208ENST00000552215 ZNF479Q96JC4 524 aa5.98□□□□□ -1.45
CHPT1-208ENST00000552215 PHOX2AO14813 284 aa5.98□□□□□ -1.45
CHPT1-208ENST00000552215 RBMY1A1P0DJD3 496 aaKnown RBP5.98□□□□□ -1.45
CHPT1-208ENST00000552215 RBMY1CP0DJD4 496 aa5.98□□□□□ -1.45
CHPT1-208ENST00000552215 RBMY1FQ15415 496 aaKnown RBP5.98□□□□□ -1.45
CHPT1-208ENST00000552215 BATFQ16520 125 aa5.98□□□□□ -1.45
CHPT1-208ENST00000552215 ZFAND6Q6FIF0 208 aa5.98□□□□□ -1.45
CHPT1-208ENST00000552215 AP5S1Q9NUS5 200 aa5.98□□□□□ -1.45
CHPT1-208ENST00000552215 RBAKDNA6NC62 111 aa5.98□□□□□ -1.45
CHPT1-208ENST00000552215 NPYP01303 97 aa5.98□□□□□ -1.45
CHPT1-208ENST00000552215 KRTAP10-11P60412 298 aa5.98□□□□□ -1.45
CHPT1-208ENST00000552215 KIR2DL4Q99706 377 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms