RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 RHPN1-AS1Q9BWJ2 59 aa9.86□□□□□ -0.83
CACNB3-219ENST00000551544 A0A087WX48 190 aa9.86□□□□□ -0.83
CACNB3-219ENST00000551544 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.86□□□□□ -0.83
CACNB3-219ENST00000551544 RASL10AQ92737 203 aa9.86□□□□□ -0.83
CACNB3-219ENST00000551544 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.86□□□□□ -0.83
CACNB3-219ENST00000551544 E9PLD3 99 aa9.85□□□□□ -0.83
CACNB3-219ENST00000551544 F8W1H4 67 aa9.85□□□□□ -0.83
CACNB3-219ENST00000551544 SUMO2P61956 95 aaKnown RBP9.85□□□□□ -0.83
CACNB3-219ENST00000551544 C10orf105Q8TEF2 133 aa9.85□□□□□ -0.83
CACNB3-219ENST00000551544 PRORYQ9H606 182 aa9.85□□□□□ -0.83
CACNB3-219ENST00000551544 K7EMI3 77 aa9.85□□□□□ -0.83
CACNB3-219ENST00000551544 K7ERJ3 54 aa9.85□□□□□ -0.83
CACNB3-219ENST00000551544 TAL2Q16559 108 aa9.85□□□□□ -0.83
CACNB3-219ENST00000551544 MAPKAPK5-AS1Q8N8E1 139 aa9.85□□□□□ -0.83
CACNB3-219ENST00000551544 DPH3P1Q9H4G8 78 aa9.85□□□□□ -0.83
CACNB3-219ENST00000551544 MAP1AP78559 2803 aaPredicted RBP9.85□□□□□ -0.83
CACNB3-219ENST00000551544 ITPR1Q14643 2758 aa9.84□□□□□ -0.83
CACNB3-219ENST00000551544 IGHV4-30-2A0A087WSY4 118 aa9.84□□□□□ -0.83
CACNB3-219ENST00000551544 A6NDX4 124 aa9.84□□□□□ -0.83
CACNB3-219ENST00000551544 EDN2P20800 178 aa9.84□□□□□ -0.83
CACNB3-219ENST00000551544 ATP5J2P56134 94 aa9.84□□□□□ -0.83
CACNB3-219ENST00000551544 FOXI2Q6ZQN5 318 aa9.84□□□□□ -0.83
CACNB3-219ENST00000551544 SCGB3A1Q96QR1 104 aa9.84□□□□□ -0.83
CACNB3-219ENST00000551544 COL12A1Q99715 3063 aa9.84□□□□□ -0.83
CACNB3-219ENST00000551544 SIGMAR1Q99720 223 aa9.84□□□□□ -0.83
CACNB3-219ENST00000551544 NHP2Q9NX24 153 aaKnown RBP9.83□□□□□ -0.84
CACNB3-219ENST00000551544 A0A1B0GV72 72 aa9.83□□□□□ -0.84
CACNB3-219ENST00000551544 ORMDL2Q53FV1 153 aa9.83□□□□□ -0.84
CACNB3-219ENST00000551544 IGLL5B9A064 214 aa9.83□□□□□ -0.84
CACNB3-219ENST00000551544 H3BUA1 57 aa9.83□□□□□ -0.84
CACNB3-219ENST00000551544 J3QR89 54 aa9.83□□□□□ -0.84
CACNB3-219ENST00000551544 AZU1P20160 251 aa9.83□□□□□ -0.84
CACNB3-219ENST00000551544 CD300EQ496F6 205 aaPredicted RBP9.83□□□□□ -0.84
CACNB3-219ENST00000551544 SPANXB1Q9NS25 103 aaPredicted RBP9.83□□□□□ -0.84
CACNB3-219ENST00000551544 RNASE3P12724 160 aaKnown RBP9.82□□□□□ -0.84
CACNB3-219ENST00000551544 PLNP26678 52 aa9.82□□□□□ -0.84
CACNB3-219ENST00000551544 DEFB104AQ8WTQ1 72 aa9.82□□□□□ -0.84
CACNB3-219ENST00000551544 DAZ1Q9NQZ3 744 aaKnown RBP9.82□□□□□ -0.84
CACNB3-219ENST00000551544 H7C1H1 209 aa9.82□□□□□ -0.84
CACNB3-219ENST00000551544 FAM19A4Q96LR4 140 aa9.82□□□□□ -0.84
CACNB3-219ENST00000551544 C20orf78Q9BR46 151 aa9.82□□□□□ -0.84
CACNB3-219ENST00000551544 F8VRH5 84 aa9.81□□□□□ -0.84
CACNB3-219ENST00000551544 MSMBP08118 114 aa9.81□□□□□ -0.84
CACNB3-219ENST00000551544 TOMM6Q96B49 74 aa9.81□□□□□ -0.84
CACNB3-219ENST00000551544 CSPG4Q6UVK1 2322 aa9.81□□□□□ -0.84
CACNB3-219ENST00000551544 AVPP01185 164 aa9.81□□□□□ -0.84
CACNB3-219ENST00000551544 ZNF479Q96JC4 524 aa9.81□□□□□ -0.84
CACNB3-219ENST00000551544 SPATA25Q9BR10 227 aa9.81□□□□□ -0.84
CACNB3-219ENST00000551544 GAGE12HA6NDE8 117 aa9.8□□□□□ -0.84
CACNB3-219ENST00000551544 C2orf66Q6UXQ4 117 aa9.8□□□□□ -0.84
CACNB3-219ENST00000551544 IGLV1-40P01703 118 aa9.8□□□□□ -0.84
CACNB3-219ENST00000551544 C12orf74Q32Q52 190 aa9.8□□□□□ -0.84
CACNB3-219ENST00000551544 GTSF1LQ9H1H1 148 aa9.8□□□□□ -0.84
CACNB3-219ENST00000551544 TSSC4Q9Y5U2 329 aaPredicted RBP9.8□□□□□ -0.84
CACNB3-219ENST00000551544 TRAV12-1A0A0B4J245 112 aa9.79□□□□□ -0.84
CACNB3-219ENST00000551544 RNF223E7ERA6 249 aa9.79□□□□□ -0.84
CACNB3-219ENST00000551544 LINC01619G3V211 115 aa9.79□□□□□ -0.84
CACNB3-219ENST00000551544 BRI3O95415 125 aa9.79□□□□□ -0.84
CACNB3-219ENST00000551544 WFDC2Q14508 124 aa9.79□□□□□ -0.84
CACNB3-219ENST00000551544 JPT2Q9H910 190 aa9.79□□□□□ -0.84
CACNB3-219ENST00000551544 NEXN-AS1Q8NBZ9 246 aa9.79□□□□□ -0.84
CACNB3-219ENST00000551544 HIST1H4GQ99525 98 aa9.79□□□□□ -0.84
CACNB3-219ENST00000551544 MED14OSP0DP75 135 aa9.78□□□□□ -0.84
CACNB3-219ENST00000551544 FAM159AQ6UWV7 190 aa9.78□□□□□ -0.84
CACNB3-219ENST00000551544 APRG1Q8IVJ8 170 aa9.78□□□□□ -0.84
CACNB3-219ENST00000551544 OR11H12B2RN74 326 aa9.78□□□□□ -0.84
CACNB3-219ENST00000551544 SLC25A16P16260 332 aa9.78□□□□□ -0.84
CACNB3-219ENST00000551544 CRYBA4P53673 196 aa9.78□□□□□ -0.84
CACNB3-219ENST00000551544 SHISA2Q6UWI4 295 aa9.78□□□□□ -0.84
CACNB3-219ENST00000551544 OR11H1Q8NG94 326 aa9.78□□□□□ -0.84
CACNB3-219ENST00000551544 OR11H2Q8NH07 326 aa9.78□□□□□ -0.84
CACNB3-219ENST00000551544 BAALCQ8WXS3 180 aa9.78□□□□□ -0.84
CACNB3-219ENST00000551544 MUC4Q99102 2169 aa9.78□□□□□ -0.84
CACNB3-219ENST00000551544 TRAV26-1A0A087WT03 109 aa9.78□□□□□ -0.84
CACNB3-219ENST00000551544 TRAV12-3A0A0B4J271 114 aa9.78□□□□□ -0.84
CACNB3-219ENST00000551544 A0A1B0GWB2 263 aa9.78□□□□□ -0.84
CACNB3-219ENST00000551544 IGKV3-20P01619 116 aa9.78□□□□□ -0.84
CACNB3-219ENST00000551544 SMAGPQ0VAQ4 97 aa9.78□□□□□ -0.84
CACNB3-219ENST00000551544 C10orf99Q6UWK7 81 aa9.78□□□□□ -0.84
CACNB3-219ENST00000551544 PKD1L2Q7Z442 2459 aa9.77□□□□□ -0.84
CACNB3-219ENST00000551544 A0A087WWL8 130 aa9.77□□□□□ -0.85
CACNB3-219ENST00000551544 CD7P09564 240 aa9.77□□□□□ -0.85
CACNB3-219ENST00000551544 ID1P41134 155 aa9.77□□□□□ -0.85
CACNB3-219ENST00000551544 NRGNQ92686 78 aa9.77□□□□□ -0.85
CACNB3-219ENST00000551544 AGRNO00468 2067 aa9.77□□□□□ -0.85
CACNB3-219ENST00000551544 PRSS29PA6NIE9 313 aa9.77□□□□□ -0.85
CACNB3-219ENST00000551544 F5H697 171 aa9.77□□□□□ -0.85
CACNB3-219ENST00000551544 RRN3P1Q2M238 152 aa9.77□□□□□ -0.85
CACNB3-219ENST00000551544 SPAG8Q99932 426 aaPredicted RBP9.77□□□□□ -0.85
CACNB3-219ENST00000551544 TRBV7-3A0A075B6L6 115 aa9.76□□□□□ -0.85
CACNB3-219ENST00000551544 TRBV7-9A0A0J9YWB2 115 aa9.76□□□□□ -0.85
CACNB3-219ENST00000551544 KLLNB2CW77 178 aa9.76□□□□□ -0.85
CACNB3-219ENST00000551544 H3BMG7 143 aa9.76□□□□□ -0.85
CACNB3-219ENST00000551544 ZNF688P0C7X2 276 aa9.76□□□□□ -0.85
CACNB3-219ENST00000551544 CFHR3Q02985 330 aa9.76□□□□□ -0.85
CACNB3-219ENST00000551544 DCANP1Q8TF63 244 aa9.76□□□□□ -0.85
CACNB3-219ENST00000551544 PRO0461Q9UI25 63 aa9.76□□□□□ -0.85
CACNB3-219ENST00000551544 DUSP14O95147 198 aaKnown RBP9.76□□□□□ -0.85
CACNB3-219ENST00000551544 IGHV4-59P01825 116 aa9.76□□□□□ -0.85
CACNB3-219ENST00000551544 GAGE13Q4V321 117 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms